Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm22228-201ENSMUST00000157364 101 ntBASIC1.02□□□□□ -2.25
H2afb2S4R1M3 Gm24559-201ENSMUST00000157519 121 ntBASIC1.02□□□□□ -2.25
H2afb2S4R1M3 Mir3061-201ENSMUST00000175129 91 ntBASIC1.02□□□□□ -2.25
H2afb2S4R1M3 Gm26073-201ENSMUST00000179906 127 ntBASIC1.02□□□□□ -2.25
H2afb2S4R1M3 Gm37624-201ENSMUST00000193751 219 ntBASIC1.02□□□□□ -2.25
H2afb2S4R1M3 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
H2afb2S4R1M3 Gm44358-201ENSMUST00000196301 98 ntBASIC1.02□□□□□ -2.25
H2afb2S4R1M3 Gm44464-201ENSMUST00000198010 138 ntBASIC1.02□□□□□ -2.25
H2afb2S4R1M3 Mir6962-201ENSMUST00000199512 63 ntBASIC1.02□□□□□ -2.25
H2afb2S4R1M3 Gm45268-201ENSMUST00000210046 370 ntBASIC1.02□□□□□ -2.25
H2afb2S4R1M3 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.02□□□□□ -2.25
H2afb2S4R1M3 Snord1a-201ENSMUST00000083160 74 ntBASIC1.02□□□□□ -2.25
H2afb2S4R1M3 Gm25650-201ENSMUST00000083784 162 ntBASIC1.02□□□□□ -2.25
H2afb2S4R1M3 Gm25323-201ENSMUST00000122555 103 ntBASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Gm24000-201ENSMUST00000158063 89 ntBASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Gm25223-201ENSMUST00000158200 110 ntBASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Gm25267-201ENSMUST00000158522 63 ntBASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Gm23967-201ENSMUST00000175062 78 ntBASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Gm42988-201ENSMUST00000198116 225 ntBASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Gm44853-201ENSMUST00000209070 250 ntBASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.01□□□□□ -2.25
H2afb2S4R1M3 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Snora20-201ENSMUST00000082703 128 ntBASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Snord96a-201ENSMUST00000082791 81 ntBASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Gm23461-201ENSMUST00000083265 107 ntBASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Gm24494-201ENSMUST00000083804 81 ntBASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
H2afb2S4R1M3 Gm25943-201ENSMUST00000103791 90 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Gm25878-201ENSMUST00000104327 93 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Mir880-201ENSMUST00000104809 78 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Gm6952-201ENSMUST00000118629 159 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Gm26415-201ENSMUST00000157673 292 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Gm22164-201ENSMUST00000158413 106 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Gm23339-201ENSMUST00000158962 139 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Gm26160-201ENSMUST00000158965 63 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Gm23864-201ENSMUST00000177607 107 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Gm25285-201ENSMUST00000178951 90 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Mir7665-201ENSMUST00000184907 63 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Gm26204-201ENSMUST00000082906 107 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Gm25410-201ENSMUST00000083758 137 ntBASIC1□□□□□ -2.25
H2afb2S4R1M3 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1□□□□□ -2.25
H2afb2S4R1M3 Gm23996-201ENSMUST00000158062 131 ntBASIC0.99□□□□□ -2.25
H2afb2S4R1M3 Gm22929-201ENSMUST00000175517 107 ntBASIC0.99□□□□□ -2.25
H2afb2S4R1M3 Gm23267-201ENSMUST00000178490 132 ntBASIC0.99□□□□□ -2.25
H2afb2S4R1M3 Gm27326-201ENSMUST00000183504 95 ntBASIC0.99□□□□□ -2.25
H2afb2S4R1M3 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.99□□□□□ -2.25
H2afb2S4R1M3 Mir302d-201ENSMUST00000083513 66 ntBASIC0.99□□□□□ -2.25
H2afb2S4R1M3 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
H2afb2S4R1M3 Gm14923-201ENSMUST00000118270 155 ntBASIC0.98□□□□□ -2.25
H2afb2S4R1M3 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.98□□□□□ -2.25
H2afb2S4R1M3 Gm22074-201ENSMUST00000158595 113 ntBASIC0.98□□□□□ -2.25
H2afb2S4R1M3 Gm23209-201ENSMUST00000158667 110 ntBASIC0.98□□□□□ -2.25
H2afb2S4R1M3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
H2afb2S4R1M3 Gm27803-201ENSMUST00000183763 119 ntBASIC0.98□□□□□ -2.25
H2afb2S4R1M3 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.98□□□□□ -2.25
H2afb2S4R1M3 Gm26225-201ENSMUST00000082508 135 ntBASIC0.98□□□□□ -2.25
H2afb2S4R1M3 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.98□□□□□ -2.25
H2afb2S4R1M3 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
H2afb2S4R1M3 Gm22785-201ENSMUST00000104087 132 ntBASIC0.97□□□□□ -2.25
H2afb2S4R1M3 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.97□□□□□ -2.25
H2afb2S4R1M3 Gm16399-201ENSMUST00000181423 219 ntBASIC0.97□□□□□ -2.25
H2afb2S4R1M3 Mir7039-201ENSMUST00000183852 85 ntBASIC0.97□□□□□ -2.25
H2afb2S4R1M3 Gm27285-201ENSMUST00000183875 127 ntBASIC0.97□□□□□ -2.25
H2afb2S4R1M3 AL929417.1-201ENSMUST00000214901 124 ntBASIC0.97□□□□□ -2.25
H2afb2S4R1M3 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.97□□□□□ -2.25
H2afb2S4R1M3 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.97□□□□□ -2.25
H2afb2S4R1M3 Gm22169-201ENSMUST00000083229 107 ntBASIC0.97□□□□□ -2.25
H2afb2S4R1M3 Gm24276-201ENSMUST00000102181 110 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 Gm24171-201ENSMUST00000104126 131 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 Gm13922-201ENSMUST00000119505 156 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 Gm25985-201ENSMUST00000122677 107 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 Gm22387-201ENSMUST00000158191 131 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 Gm25768-201ENSMUST00000158570 98 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 Mir8119-201ENSMUST00000183371 129 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 Mir6380-201ENSMUST00000184334 81 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 Gm20118-201ENSMUST00000187207 162 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 Mir721-201ENSMUST00000200230 88 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.96□□□□□ -2.26
H2afb2S4R1M3 Snord100-201ENSMUST00000116836 74 ntBASIC0.95□□□□□ -2.26
H2afb2S4R1M3 Gm14567-201ENSMUST00000117155 174 ntBASIC0.95□□□□□ -2.26
H2afb2S4R1M3 Gm25771-201ENSMUST00000158565 144 ntBASIC0.95□□□□□ -2.26
H2afb2S4R1M3 Mir7014-201ENSMUST00000183853 63 ntBASIC0.95□□□□□ -2.26
H2afb2S4R1M3 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.95□□□□□ -2.26
H2afb2S4R1M3 Gm44396-201ENSMUST00000199843 114 ntBASIC0.95□□□□□ -2.26
H2afb2S4R1M3 Gm43898-201ENSMUST00000204456 424 ntBASIC0.95□□□□□ -2.26
H2afb2S4R1M3 Gm45544-201ENSMUST00000211130 88 ntBASIC0.95□□□□□ -2.26
H2afb2S4R1M3 Gm19790-201ENSMUST00000214414 251 ntBASIC0.95□□□□□ -2.26
H2afb2S4R1M3 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.95□□□□□ -2.26
H2afb2S4R1M3 Gm26224-201ENSMUST00000082506 80 ntBASIC0.95□□□□□ -2.26
H2afb2S4R1M3 Gm26326-201ENSMUST00000083070 129 ntBASIC0.95□□□□□ -2.26
H2afb2S4R1M3 Mir451a-201ENSMUST00000093557 72 ntBASIC0.95□□□□□ -2.26
H2afb2S4R1M3 Gm24588-201ENSMUST00000116696 83 ntBASIC0.94□□□□□ -2.26
H2afb2S4R1M3 Gm24915-201ENSMUST00000157288 78 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 146.2 ms