Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm45859-201ENSMUST00000212794 214 ntBASIC0.76□□□□□ -2.29
Trim3Q9R1R2 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.76□□□□□ -2.29
Trim3Q9R1R2 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Trim3Q9R1R2 Mir669l-201ENSMUST00000103771 98 ntBASIC0.75□□□□□ -2.29
Trim3Q9R1R2 Gm25362-201ENSMUST00000158854 105 ntBASIC0.75□□□□□ -2.29
Trim3Q9R1R2 Gm44976-201ENSMUST00000205543 261 ntBASIC0.75□□□□□ -2.29
Trim3Q9R1R2 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.75□□□□□ -2.29
Trim3Q9R1R2 Mir451a-201ENSMUST00000093557 72 ntBASIC0.75□□□□□ -2.29
Trim3Q9R1R2 Gm25170-201ENSMUST00000104191 129 ntBASIC0.74□□□□□ -2.29
Trim3Q9R1R2 Gm15069-201ENSMUST00000117792 192 ntBASIC0.74□□□□□ -2.29
Trim3Q9R1R2 Gm14001-201ENSMUST00000118847 247 ntBASIC0.74□□□□□ -2.29
Trim3Q9R1R2 Gm15068-201ENSMUST00000119796 192 ntBASIC0.74□□□□□ -2.29
Trim3Q9R1R2 Gm13246-201ENSMUST00000120994 315 ntBASIC0.74□□□□□ -2.29
Trim3Q9R1R2 Gm24594-201ENSMUST00000122502 99 ntBASIC0.74□□□□□ -2.29
Trim3Q9R1R2 Gm26026-201ENSMUST00000122726 123 ntBASIC0.74□□□□□ -2.29
Trim3Q9R1R2 Mir1961-201ENSMUST00000158643 112 ntBASIC0.74□□□□□ -2.29
Trim3Q9R1R2 Gm44948-201ENSMUST00000209050 149 ntBASIC0.74□□□□□ -2.29
Trim3Q9R1R2 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.74□□□□□ -2.29
Trim3Q9R1R2 Mir146-201ENSMUST00000083667 65 ntBASIC0.74□□□□□ -2.29
Trim3Q9R1R2 Gm24171-201ENSMUST00000104126 131 ntBASIC0.73□□□□□ -2.29
Trim3Q9R1R2 Gm24635-201ENSMUST00000122712 128 ntBASIC0.73□□□□□ -2.29
Trim3Q9R1R2 Gm22387-201ENSMUST00000158191 131 ntBASIC0.73□□□□□ -2.29
Trim3Q9R1R2 Gm16539-201ENSMUST00000160086 327 ntBASIC0.73□□□□□ -2.29
Trim3Q9R1R2 Snora24-201ENSMUST00000174989 130 ntBASIC0.73□□□□□ -2.29
Trim3Q9R1R2 Gm20630-201ENSMUST00000177387 551 ntBASIC0.73□□□□□ -2.29
Trim3Q9R1R2 Gm27585-201ENSMUST00000183717 199 ntBASIC0.73□□□□□ -2.29
Trim3Q9R1R2 Mir324-201ENSMUST00000083600 89 ntBASIC0.73□□□□□ -2.29
Trim3Q9R1R2 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
Trim3Q9R1R2 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Trim3Q9R1R2 Gm24271-201ENSMUST00000102327 111 ntBASIC0.72□□□□□ -2.29
Trim3Q9R1R2 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trim3Q9R1R2 Snord71-201ENSMUST00000104361 85 ntBASIC0.72□□□□□ -2.29
Trim3Q9R1R2 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.72□□□□□ -2.29
Trim3Q9R1R2 Gm20386-201ENSMUST00000174010 132 ntBASIC0.72□□□□□ -2.29
Trim3Q9R1R2 Gm38113-201ENSMUST00000193704 201 ntBASIC0.72□□□□□ -2.29
Trim3Q9R1R2 Gm42533-201ENSMUST00000196247 157 ntBASIC0.72□□□□□ -2.29
Trim3Q9R1R2 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.72□□□□□ -2.29
Trim3Q9R1R2 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.72□□□□□ -2.29
Trim3Q9R1R2 Snord32a-201ENSMUST00000083285 83 ntBASIC0.72□□□□□ -2.29
Trim3Q9R1R2 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.72□□□□□ -2.29
Trim3Q9R1R2 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.72□□□□□ -2.29
Trim3Q9R1R2 Mir695-201ENSMUST00000102261 109 ntBASIC0.71□□□□□ -2.3
Trim3Q9R1R2 Gm26338-201ENSMUST00000102372 110 ntBASIC0.71□□□□□ -2.3
Trim3Q9R1R2 Gm25828-201ENSMUST00000157087 95 ntBASIC0.71□□□□□ -2.3
Trim3Q9R1R2 Gm24559-201ENSMUST00000157519 121 ntBASIC0.71□□□□□ -2.3
Trim3Q9R1R2 Gm26090-201ENSMUST00000157897 128 ntBASIC0.71□□□□□ -2.3
Trim3Q9R1R2 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.71□□□□□ -2.3
Trim3Q9R1R2 Gm25935-201ENSMUST00000178746 107 ntBASIC0.71□□□□□ -2.3
Trim3Q9R1R2 Gm44464-201ENSMUST00000198010 138 ntBASIC0.71□□□□□ -2.3
Trim3Q9R1R2 Gm22686-201ENSMUST00000082847 100 ntBASIC0.71□□□□□ -2.3
Trim3Q9R1R2 Gm25544-201ENSMUST00000122676 120 ntBASIC0.7□□□□□ -2.3
Trim3Q9R1R2 Gm28020-201ENSMUST00000157739 67 ntBASIC0.7□□□□□ -2.3
Trim3Q9R1R2 Gm24225-201ENSMUST00000158825 98 ntBASIC0.7□□□□□ -2.3
Trim3Q9R1R2 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.7□□□□□ -2.3
Trim3Q9R1R2 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.7□□□□□ -2.3
Trim3Q9R1R2 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
Trim3Q9R1R2 Mir547-201ENSMUST00000102051 78 ntBASIC0.69□□□□□ -2.3
Trim3Q9R1R2 Gm24579-201ENSMUST00000103964 144 ntBASIC0.69□□□□□ -2.3
Trim3Q9R1R2 Gm22767-201ENSMUST00000158365 165 ntBASIC0.69□□□□□ -2.3
Trim3Q9R1R2 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.69□□□□□ -2.3
Trim3Q9R1R2 Gm23735-201ENSMUST00000082551 134 ntBASIC0.69□□□□□ -2.3
Trim3Q9R1R2 DQ267101-201ENSMUST00000082562 73 ntBASIC0.69□□□□□ -2.3
Trim3Q9R1R2 Mir384-201ENSMUST00000083565 88 ntBASIC0.69□□□□□ -2.3
Trim3Q9R1R2 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Trim3Q9R1R2 Gm23841-201ENSMUST00000116951 114 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Gm13922-201ENSMUST00000119505 156 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Gm25323-201ENSMUST00000122555 103 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Gm24747-201ENSMUST00000157835 87 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Gm25044-201ENSMUST00000158603 104 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Mir3109-201ENSMUST00000175301 88 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Gm22565-201ENSMUST00000175540 69 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Gm27668-201ENSMUST00000184188 120 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Gm42506-201ENSMUST00000202009 150 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Gm23378-201ENSMUST00000082942 107 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Gm22287-201ENSMUST00000083197 107 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Gm24762-201ENSMUST00000083689 104 ntBASIC0.68□□□□□ -2.3
Trim3Q9R1R2 Gm16307-201ENSMUST00000161269 210 ntBASIC0.67□□□□□ -2.3
Trim3Q9R1R2 Mir15a-201ENSMUST00000175266 84 ntBASIC0.67□□□□□ -2.3
Trim3Q9R1R2 Mir3079-201ENSMUST00000175428 90 ntBASIC0.67□□□□□ -2.3
Trim3Q9R1R2 Gm16404-201ENSMUST00000177739 468 ntBASIC0.67□□□□□ -2.3
Trim3Q9R1R2 Gm14598-201ENSMUST00000180109 468 ntBASIC0.67□□□□□ -2.3
Trim3Q9R1R2 Gm14625-201ENSMUST00000180231 468 ntBASIC0.67□□□□□ -2.3
Trim3Q9R1R2 Gm6003-201ENSMUST00000187903 463 ntBASIC0.67□□□□□ -2.3
Trim3Q9R1R2 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Gm22003-201ENSMUST00000101885 107 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Gm12771-201ENSMUST00000120246 135 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Gm26358-201ENSMUST00000158215 97 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Gm23410-201ENSMUST00000179967 107 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Gm22756-201ENSMUST00000180118 107 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Mir6364-201ENSMUST00000183396 86 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Mir6394-201ENSMUST00000184738 99 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Gm37889-201ENSMUST00000194174 251 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Gm22505-201ENSMUST00000082956 108 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Gm22363-201ENSMUST00000083100 108 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Gm23814-201ENSMUST00000083230 102 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Gm23095-201ENSMUST00000083446 107 ntBASIC0.66□□□□□ -2.3
Trim3Q9R1R2 Mir448-201ENSMUST00000083516 112 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 207 ms