Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.99□□□□□ -2.57
Six6Q9QZ28 Gm38213-201ENSMUST00000193203 173 ntBASIC-0.99□□□□□ -2.57
Six6Q9QZ28 AC112972.1-201ENSMUST00000227329 365 ntBASIC-0.99□□□□□ -2.57
Six6Q9QZ28 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.99□□□□□ -2.57
Six6Q9QZ28 Mir363-201ENSMUST00000093598 75 ntBASIC-0.99□□□□□ -2.57
Six6Q9QZ28 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
Six6Q9QZ28 Gm24340-201ENSMUST00000104208 97 ntBASIC-1□□□□□ -2.57
Six6Q9QZ28 Gm26011-201ENSMUST00000104410 104 ntBASIC-1□□□□□ -2.57
Six6Q9QZ28 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-1□□□□□ -2.57
Six6Q9QZ28 Gm22215-201ENSMUST00000157558 96 ntBASIC-1□□□□□ -2.57
Six6Q9QZ28 Gm26290-201ENSMUST00000158891 145 ntBASIC-1□□□□□ -2.57
Six6Q9QZ28 Mir3101-201ENSMUST00000175607 88 ntBASIC-1□□□□□ -2.57
Six6Q9QZ28 Gm24487-201ENSMUST00000178017 63 ntBASIC-1□□□□□ -2.57
Six6Q9QZ28 Mir6905-201ENSMUST00000184228 70 ntBASIC-1□□□□□ -2.57
Six6Q9QZ28 Gm27540-201ENSMUST00000184950 187 ntBASIC-1□□□□□ -2.57
Six6Q9QZ28 Gm43563-201ENSMUST00000196761 198 ntBASIC-1□□□□□ -2.57
Six6Q9QZ28 Gm44469-201ENSMUST00000198558 79 ntBASIC-1□□□□□ -2.57
Six6Q9QZ28 Gm26207-201ENSMUST00000082909 104 ntBASIC-1□□□□□ -2.57
Six6Q9QZ28 Gm25040-201ENSMUST00000103877 66 ntBASIC-1.01□□□□□ -2.57
Six6Q9QZ28 Gm14126-201ENSMUST00000122345 395 ntBASIC-1.01□□□□□ -2.57
Six6Q9QZ28 Gm24593-201ENSMUST00000122507 106 ntBASIC-1.01□□□□□ -2.57
Six6Q9QZ28 Mir1899-201ENSMUST00000122798 96 ntBASIC-1.01□□□□□ -2.57
Six6Q9QZ28 Gm25060-201ENSMUST00000157374 130 ntBASIC-1.01□□□□□ -2.57
Six6Q9QZ28 Gm25693-201ENSMUST00000175443 85 ntBASIC-1.01□□□□□ -2.57
Six6Q9QZ28 Gm28011-201ENSMUST00000184097 175 ntBASIC-1.01□□□□□ -2.57
Six6Q9QZ28 Snora62-201ENSMUST00000082991 149 ntBASIC-1.01□□□□□ -2.57
Six6Q9QZ28 Gm25756-201ENSMUST00000103990 136 ntBASIC-1.02□□□□□ -2.57
Six6Q9QZ28 Gm15899-201ENSMUST00000128586 238 ntBASIC-1.02□□□□□ -2.57
Six6Q9QZ28 Gm23857-201ENSMUST00000158379 111 ntBASIC-1.02□□□□□ -2.57
Six6Q9QZ28 Gm25160-201ENSMUST00000158914 102 ntBASIC-1.02□□□□□ -2.57
Six6Q9QZ28 Gm24508-201ENSMUST00000180104 107 ntBASIC-1.02□□□□□ -2.57
Six6Q9QZ28 Gm44490-201ENSMUST00000198566 127 ntBASIC-1.02□□□□□ -2.57
Six6Q9QZ28 Gm5034-201ENSMUST00000199115 634 ntBASIC-1.02□□□□□ -2.57
Six6Q9QZ28 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-1.02□□□□□ -2.57
Six6Q9QZ28 AC159297.2-201ENSMUST00000219567 1075 ntBASIC-1.02□□□□□ -2.57
Six6Q9QZ28 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
Six6Q9QZ28 Snord60-201ENSMUST00000082834 78 ntBASIC-1.02□□□□□ -2.57
Six6Q9QZ28 Gm24030-201ENSMUST00000083931 164 ntBASIC-1.02□□□□□ -2.57
Six6Q9QZ28 Gm24164-201ENSMUST00000093663 104 ntBASIC-1.02□□□□□ -2.57
Six6Q9QZ28 Snord98-201ENSMUST00000116819 65 ntBASIC-1.03□□□□□ -2.57
Six6Q9QZ28 Gm23881-201ENSMUST00000116872 66 ntBASIC-1.03□□□□□ -2.57
Six6Q9QZ28 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-1.03□□□□□ -2.57
Six6Q9QZ28 Gm23819-201ENSMUST00000158744 109 ntBASIC-1.03□□□□□ -2.57
Six6Q9QZ28 Mir6346-201ENSMUST00000183982 81 ntBASIC-1.03□□□□□ -2.57
Six6Q9QZ28 Gm38109-201ENSMUST00000195386 181 ntBASIC-1.03□□□□□ -2.57
Six6Q9QZ28 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
Six6Q9QZ28 Gm44135-201ENSMUST00000205221 368 ntBASIC-1.03□□□□□ -2.57
Six6Q9QZ28 AC125374.2-201ENSMUST00000214278 162 ntBASIC-1.03□□□□□ -2.57
Six6Q9QZ28 AL772265.1-201ENSMUST00000214379 305 ntBASIC-1.03□□□□□ -2.57
Six6Q9QZ28 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-1.03□□□□□ -2.57
Six6Q9QZ28 Gm26421-201ENSMUST00000104279 132 ntBASIC-1.04□□□□□ -2.58
Six6Q9QZ28 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-1.04□□□□□ -2.58
Six6Q9QZ28 Gm18665-201ENSMUST00000189783 270 ntBASIC-1.04□□□□□ -2.58
Six6Q9QZ28 Gm45688-201ENSMUST00000210002 101 ntBASIC-1.04□□□□□ -2.58
Six6Q9QZ28 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.04□□□□□ -2.58
Six6Q9QZ28 Gm9973-202ENSMUST00000220926 166 ntBASIC-1.04□□□□□ -2.58
Six6Q9QZ28 Gm25801-201ENSMUST00000082638 106 ntBASIC-1.04□□□□□ -2.58
Six6Q9QZ28 Gm22543-201ENSMUST00000104347 94 ntBASIC-1.05□□□□□ -2.58
Six6Q9QZ28 Gm23101-201ENSMUST00000157550 137 ntBASIC-1.05□□□□□ -2.58
Six6Q9QZ28 Gm24290-201ENSMUST00000157634 96 ntBASIC-1.05□□□□□ -2.58
Six6Q9QZ28 Gm22733-201ENSMUST00000158094 91 ntBASIC-1.05□□□□□ -2.58
Six6Q9QZ28 Gm23759-201ENSMUST00000158351 268 ntBASIC-1.05□□□□□ -2.58
Six6Q9QZ28 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-1.05□□□□□ -2.58
Six6Q9QZ28 Gm18242-201ENSMUST00000218455 542 ntBASIC-1.05□□□□□ -2.58
Six6Q9QZ28 CT009550.5-201ENSMUST00000226286 382 ntBASIC-1.05□□□□□ -2.58
Six6Q9QZ28 AC098718.2-201ENSMUST00000226822 285 ntBASIC-1.05□□□□□ -2.58
Six6Q9QZ28 Gm25930-201ENSMUST00000082785 107 ntBASIC-1.05□□□□□ -2.58
Six6Q9QZ28 Gm22652-201ENSMUST00000083207 131 ntBASIC-1.05□□□□□ -2.58
Six6Q9QZ28 Mir96-201ENSMUST00000083652 106 ntBASIC-1.05□□□□□ -2.58
Six6Q9QZ28 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-1.06□□□□□ -2.58
Six6Q9QZ28 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.06□□□□□ -2.58
Six6Q9QZ28 Scarna9-201ENSMUST00000104318 70 ntBASIC-1.06□□□□□ -2.58
Six6Q9QZ28 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-1.06□□□□□ -2.58
Six6Q9QZ28 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-1.06□□□□□ -2.58
Six6Q9QZ28 Gm24894-201ENSMUST00000122744 118 ntBASIC-1.06□□□□□ -2.58
Six6Q9QZ28 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.06□□□□□ -2.58
Six6Q9QZ28 Gm35558-203ENSMUST00000222264 204 ntBASIC-1.06□□□□□ -2.58
Six6Q9QZ28 Gm23492-201ENSMUST00000116837 115 ntBASIC-1.07□□□□□ -2.58
Six6Q9QZ28 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-1.07□□□□□ -2.58
Six6Q9QZ28 Gm22085-201ENSMUST00000158344 110 ntBASIC-1.07□□□□□ -2.58
Six6Q9QZ28 Gm27610-201ENSMUST00000184026 74 ntBASIC-1.07□□□□□ -2.58
Six6Q9QZ28 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC-1.07□□□□□ -2.58
Six6Q9QZ28 AC150901.1-201ENSMUST00000208407 145 ntBASIC-1.07□□□□□ -2.58
Six6Q9QZ28 AC154282.1-201ENSMUST00000223154 265 ntBASIC-1.07□□□□□ -2.58
Six6Q9QZ28 Gm24707-201ENSMUST00000082812 107 ntBASIC-1.07□□□□□ -2.58
Six6Q9QZ28 Mir16-2-201ENSMUST00000083672 95 ntBASIC-1.07□□□□□ -2.58
Six6Q9QZ28 Gm24171-201ENSMUST00000104126 131 ntBASIC-1.08□□□□□ -2.58
Six6Q9QZ28 Gm22883-201ENSMUST00000157376 106 ntBASIC-1.08□□□□□ -2.58
Six6Q9QZ28 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-1.08□□□□□ -2.58
Six6Q9QZ28 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-1.08□□□□□ -2.58
Six6Q9QZ28 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-1.08□□□□□ -2.58
Six6Q9QZ28 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-1.08□□□□□ -2.58
Six6Q9QZ28 Gm14287-201ENSMUST00000121060 117 ntBASIC-1.09□□□□□ -2.58
Six6Q9QZ28 Mir669k-201ENSMUST00000177742 127 ntBASIC-1.09□□□□□ -2.58
Six6Q9QZ28 Gm22450-201ENSMUST00000179641 107 ntBASIC-1.09□□□□□ -2.58
Six6Q9QZ28 Gm24488-201ENSMUST00000179934 127 ntBASIC-1.09□□□□□ -2.58
Six6Q9QZ28 Gm25673-201ENSMUST00000179957 127 ntBASIC-1.09□□□□□ -2.58
Six6Q9QZ28 Gm25701-201ENSMUST00000179988 127 ntBASIC-1.09□□□□□ -2.58
Six6Q9QZ28 Gm26431-201ENSMUST00000180199 127 ntBASIC-1.09□□□□□ -2.58
Six6Q9QZ28 AC153541.1-201ENSMUST00000213786 294 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 267 ms