Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm22704-201ENSMUST00000083027 137 ntBASIC1.12□□□□□ -2.23
Cpsf3Q9QXK7 Gm24929-201ENSMUST00000083403 139 ntBASIC1.12□□□□□ -2.23
Cpsf3Q9QXK7 Gm13246-201ENSMUST00000120994 315 ntBASIC1.11□□□□□ -2.23
Cpsf3Q9QXK7 Gm14671-201ENSMUST00000121790 262 ntBASIC1.11□□□□□ -2.23
Cpsf3Q9QXK7 Gm25828-201ENSMUST00000157087 95 ntBASIC1.11□□□□□ -2.23
Cpsf3Q9QXK7 Gm25653-201ENSMUST00000158473 138 ntBASIC1.11□□□□□ -2.23
Cpsf3Q9QXK7 Gm26092-201ENSMUST00000179798 97 ntBASIC1.11□□□□□ -2.23
Cpsf3Q9QXK7 Mir669a-1-201ENSMUST00000180238 97 ntBASIC1.11□□□□□ -2.23
Cpsf3Q9QXK7 Mir7091-201ENSMUST00000184075 79 ntBASIC1.11□□□□□ -2.23
Cpsf3Q9QXK7 Gm44464-201ENSMUST00000198010 138 ntBASIC1.11□□□□□ -2.23
Cpsf3Q9QXK7 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.11□□□□□ -2.23
Cpsf3Q9QXK7 Gm25895-201ENSMUST00000083714 100 ntBASIC1.11□□□□□ -2.23
Cpsf3Q9QXK7 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.11□□□□□ -2.23
Cpsf3Q9QXK7 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Cpsf3Q9QXK7 Gm25878-201ENSMUST00000104327 93 ntBASIC1.1□□□□□ -2.23
Cpsf3Q9QXK7 Gm24590-201ENSMUST00000116699 119 ntBASIC1.1□□□□□ -2.23
Cpsf3Q9QXK7 Gm25390-201ENSMUST00000157341 103 ntBASIC1.1□□□□□ -2.23
Cpsf3Q9QXK7 Gm27420-201ENSMUST00000183823 79 ntBASIC1.1□□□□□ -2.23
Cpsf3Q9QXK7 Gm42988-201ENSMUST00000198116 225 ntBASIC1.1□□□□□ -2.23
Cpsf3Q9QXK7 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.1□□□□□ -2.23
Cpsf3Q9QXK7 Gm23423-201ENSMUST00000082782 106 ntBASIC1.1□□□□□ -2.23
Cpsf3Q9QXK7 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Cpsf3Q9QXK7 Gm24171-201ENSMUST00000104126 131 ntBASIC1.09□□□□□ -2.23
Cpsf3Q9QXK7 Gm24867-201ENSMUST00000104161 107 ntBASIC1.09□□□□□ -2.23
Cpsf3Q9QXK7 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Cpsf3Q9QXK7 Gm15069-201ENSMUST00000117792 192 ntBASIC1.09□□□□□ -2.23
Cpsf3Q9QXK7 Gm15068-201ENSMUST00000119796 192 ntBASIC1.09□□□□□ -2.23
Cpsf3Q9QXK7 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.09□□□□□ -2.23
Cpsf3Q9QXK7 Gm24777-201ENSMUST00000157644 107 ntBASIC1.09□□□□□ -2.23
Cpsf3Q9QXK7 Gm24015-201ENSMUST00000157725 232 ntBASIC1.09□□□□□ -2.23
Cpsf3Q9QXK7 Gm22767-201ENSMUST00000158365 165 ntBASIC1.09□□□□□ -2.23
Cpsf3Q9QXK7 Mir3968-201ENSMUST00000175355 100 ntBASIC1.09□□□□□ -2.23
Cpsf3Q9QXK7 Gm43898-201ENSMUST00000204456 424 ntBASIC1.09□□□□□ -2.23
Cpsf3Q9QXK7 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm24835-201ENSMUST00000116777 111 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm25323-201ENSMUST00000122555 103 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm26279-201ENSMUST00000157095 102 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm22233-201ENSMUST00000157464 114 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm25494-201ENSMUST00000158143 100 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm25223-201ENSMUST00000158200 110 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm25868-201ENSMUST00000158253 114 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm23114-201ENSMUST00000158478 117 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm25715-201ENSMUST00000158627 125 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Mir6240-201ENSMUST00000184281 117 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm44396-201ENSMUST00000199843 114 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Snora41-201ENSMUST00000082668 132 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm25851-201ENSMUST00000082794 107 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm24522-201ENSMUST00000083964 108 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Mir451a-201ENSMUST00000093557 72 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.08□□□□□ -2.24
Cpsf3Q9QXK7 Mir466p-201ENSMUST00000103925 89 ntBASIC1.07□□□□□ -2.24
Cpsf3Q9QXK7 Gm14568-201ENSMUST00000119321 294 ntBASIC1.07□□□□□ -2.24
Cpsf3Q9QXK7 Gm24559-201ENSMUST00000157519 121 ntBASIC1.07□□□□□ -2.24
Cpsf3Q9QXK7 Gm23545-201ENSMUST00000158205 104 ntBASIC1.07□□□□□ -2.24
Cpsf3Q9QXK7 Gm23328-201ENSMUST00000157418 132 ntBASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 Gm25267-201ENSMUST00000158522 63 ntBASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 Gm22200-201ENSMUST00000158614 67 ntBASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 Gm25464-201ENSMUST00000175481 107 ntBASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 Gm27365-201ENSMUST00000184041 177 ntBASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 Mir7052-201ENSMUST00000184821 65 ntBASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 Gm28256-201ENSMUST00000188953 139 ntBASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 Gm28559-201ENSMUST00000190532 139 ntBASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 AC154390.1-201ENSMUST00000225629 277 ntBASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 Gm24624-201ENSMUST00000082617 164 ntBASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 Snora20-201ENSMUST00000082703 128 ntBASIC1.06□□□□□ -2.24
Cpsf3Q9QXK7 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Cpsf3Q9QXK7 Gm14838-201ENSMUST00000118913 248 ntBASIC1.05□□□□□ -2.24
Cpsf3Q9QXK7 Gm24221-201ENSMUST00000158833 313 ntBASIC1.05□□□□□ -2.24
Cpsf3Q9QXK7 Mir7663-201ENSMUST00000183950 61 ntBASIC1.05□□□□□ -2.24
Cpsf3Q9QXK7 Gm45471-201ENSMUST00000211270 281 ntBASIC1.05□□□□□ -2.24
Cpsf3Q9QXK7 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.05□□□□□ -2.24
Cpsf3Q9QXK7 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Cpsf3Q9QXK7 Gm24431-201ENSMUST00000104073 66 ntBASIC1.04□□□□□ -2.24
Cpsf3Q9QXK7 Gm24729-201ENSMUST00000158225 137 ntBASIC1.04□□□□□ -2.24
Cpsf3Q9QXK7 Gm24880-201ENSMUST00000158776 85 ntBASIC1.04□□□□□ -2.24
Cpsf3Q9QXK7 Gm25838-201ENSMUST00000158920 120 ntBASIC1.04□□□□□ -2.24
Cpsf3Q9QXK7 Gm16539-201ENSMUST00000160086 327 ntBASIC1.04□□□□□ -2.24
Cpsf3Q9QXK7 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.04□□□□□ -2.24
Cpsf3Q9QXK7 Gm45268-201ENSMUST00000210046 370 ntBASIC1.04□□□□□ -2.24
Cpsf3Q9QXK7 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.03□□□□□ -2.24
Cpsf3Q9QXK7 Gm26090-201ENSMUST00000157897 128 ntBASIC1.03□□□□□ -2.24
Cpsf3Q9QXK7 Gm22387-201ENSMUST00000158191 131 ntBASIC1.03□□□□□ -2.24
Cpsf3Q9QXK7 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.03□□□□□ -2.24
Cpsf3Q9QXK7 Mir6380-201ENSMUST00000184334 81 ntBASIC1.03□□□□□ -2.24
Cpsf3Q9QXK7 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.03□□□□□ -2.24
Cpsf3Q9QXK7 Gm24271-201ENSMUST00000102327 111 ntBASIC1.02□□□□□ -2.25
Cpsf3Q9QXK7 Gm23258-201ENSMUST00000158319 106 ntBASIC1.02□□□□□ -2.25
Cpsf3Q9QXK7 Snora24-201ENSMUST00000174989 130 ntBASIC1.02□□□□□ -2.25
Cpsf3Q9QXK7 Mir8119-201ENSMUST00000183371 129 ntBASIC1.02□□□□□ -2.25
Cpsf3Q9QXK7 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.02□□□□□ -2.25
Cpsf3Q9QXK7 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.02□□□□□ -2.25
Cpsf3Q9QXK7 Gm12432-201ENSMUST00000119540 186 ntBASIC1.01□□□□□ -2.25
Cpsf3Q9QXK7 Gm25834-201ENSMUST00000158916 101 ntBASIC1.01□□□□□ -2.25
Cpsf3Q9QXK7 Gm26160-201ENSMUST00000158965 63 ntBASIC1.01□□□□□ -2.25
Cpsf3Q9QXK7 Gm22914-201ENSMUST00000175195 77 ntBASIC1.01□□□□□ -2.25
Cpsf3Q9QXK7 Gm16404-201ENSMUST00000177739 468 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms