Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm25729-201ENSMUST00000179050 108 ntBASIC2.04□□□□□ -2.08
Ldb3Q9JKS4 Gm25359-201ENSMUST00000179315 108 ntBASIC2.04□□□□□ -2.08
Ldb3Q9JKS4 Gm22624-201ENSMUST00000179913 108 ntBASIC2.04□□□□□ -2.08
Ldb3Q9JKS4 Mir3069-201ENSMUST00000198802 65 ntBASIC2.04□□□□□ -2.08
Ldb3Q9JKS4 Mir497-201ENSMUST00000200557 84 ntBASIC2.04□□□□□ -2.08
Ldb3Q9JKS4 Gm45544-201ENSMUST00000211130 88 ntBASIC2.04□□□□□ -2.08
Ldb3Q9JKS4 Gm24280-201ENSMUST00000104237 134 ntBASIC2.03□□□□□ -2.08
Ldb3Q9JKS4 Gm25529-201ENSMUST00000104850 92 ntBASIC2.03□□□□□ -2.08
Ldb3Q9JKS4 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.03□□□□□ -2.08
Ldb3Q9JKS4 Gm24769-201ENSMUST00000158506 129 ntBASIC2.03□□□□□ -2.08
Ldb3Q9JKS4 Gm22947-201ENSMUST00000158559 91 ntBASIC2.03□□□□□ -2.08
Ldb3Q9JKS4 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Ldb3Q9JKS4 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.03□□□□□ -2.08
Ldb3Q9JKS4 Gm24661-201ENSMUST00000083205 104 ntBASIC2.03□□□□□ -2.08
Ldb3Q9JKS4 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ldb3Q9JKS4 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Ldb3Q9JKS4 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ldb3Q9JKS4 Gm22451-201ENSMUST00000122803 151 ntBASIC2.02□□□□□ -2.09
Ldb3Q9JKS4 Gm24851-201ENSMUST00000158028 103 ntBASIC2.02□□□□□ -2.09
Ldb3Q9JKS4 Gm27446-201ENSMUST00000183963 89 ntBASIC2.02□□□□□ -2.09
Ldb3Q9JKS4 Gm44555-201ENSMUST00000209008 148 ntBASIC2.02□□□□□ -2.09
Ldb3Q9JKS4 Gm45522-201ENSMUST00000210784 166 ntBASIC2.02□□□□□ -2.09
Ldb3Q9JKS4 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.02□□□□□ -2.09
Ldb3Q9JKS4 Mir490-201ENSMUST00000093567 84 ntBASIC2.02□□□□□ -2.09
Ldb3Q9JKS4 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Ldb3Q9JKS4 Gm26015-201ENSMUST00000104402 125 ntBASIC2.01□□□□□ -2.09
Ldb3Q9JKS4 Gm26073-201ENSMUST00000179906 127 ntBASIC2.01□□□□□ -2.09
Ldb3Q9JKS4 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.01□□□□□ -2.09
Ldb3Q9JKS4 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.01□□□□□ -2.09
Ldb3Q9JKS4 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.01□□□□□ -2.09
Ldb3Q9JKS4 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.01□□□□□ -2.09
Ldb3Q9JKS4 Gm25855-201ENSMUST00000082787 72 ntBASIC2.01□□□□□ -2.09
Ldb3Q9JKS4 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.01□□□□□ -2.09
Ldb3Q9JKS4 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ldb3Q9JKS4 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Ldb3Q9JKS4 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.01□□□□□ -2.09
Ldb3Q9JKS4 Gm24000-201ENSMUST00000158063 89 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 Gm22332-201ENSMUST00000158072 126 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 Gm22429-201ENSMUST00000158553 130 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 Gm23181-201ENSMUST00000158685 110 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 Gm26004-201ENSMUST00000158804 116 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 Gm24572-201ENSMUST00000175505 88 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 Mir6388-201ENSMUST00000184417 75 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2□□□□□ -2.09
Ldb3Q9JKS4 Gm45429-201ENSMUST00000209527 172 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 CT025579.1-201ENSMUST00000223779 366 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 AC126939.1-201ENSMUST00000224943 226 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 Snord104-201ENSMUST00000083192 70 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 Snord7-201ENSMUST00000083781 97 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Ldb3Q9JKS4 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ldb3Q9JKS4 Gm43484-201ENSMUST00000198333 5966 ntBASIC2□□□□□ -2.09
Ldb3Q9JKS4 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 Gm25544-201ENSMUST00000122676 120 ntBASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 Gm16510-201ENSMUST00000153501 249 ntBASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 Gm23033-201ENSMUST00000157996 134 ntBASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 Gm22093-201ENSMUST00000158980 111 ntBASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 Gm26498-201ENSMUST00000177799 79 ntBASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 Gm26230-201ENSMUST00000180141 79 ntBASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 Gm44932-201ENSMUST00000206799 121 ntBASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
Ldb3Q9JKS4 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Ldb3Q9JKS4 Gm24913-201ENSMUST00000157286 107 ntBASIC1.98□□□□□ -2.09
Ldb3Q9JKS4 Gm22228-201ENSMUST00000157364 101 ntBASIC1.98□□□□□ -2.09
Ldb3Q9JKS4 Gm24900-201ENSMUST00000158128 134 ntBASIC1.98□□□□□ -2.09
Ldb3Q9JKS4 Gm25678-201ENSMUST00000174984 73 ntBASIC1.98□□□□□ -2.09
Ldb3Q9JKS4 Gm24656-201ENSMUST00000177548 132 ntBASIC1.98□□□□□ -2.09
Ldb3Q9JKS4 Gm27399-201ENSMUST00000184250 78 ntBASIC1.98□□□□□ -2.09
Ldb3Q9JKS4 Mir7232-201ENSMUST00000197929 74 ntBASIC1.98□□□□□ -2.09
Ldb3Q9JKS4 Snora20-201ENSMUST00000082703 128 ntBASIC1.98□□□□□ -2.09
Ldb3Q9JKS4 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Gm26076-201ENSMUST00000104065 105 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Gm22545-201ENSMUST00000104350 132 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Gm23656-201ENSMUST00000122626 112 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Gm22083-201ENSMUST00000157586 102 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Gm20477-201ENSMUST00000174028 280 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Gm28270-201ENSMUST00000188550 109 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Gm28328-201ENSMUST00000188869 109 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Gm3724-201ENSMUST00000197957 349 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Gm44477-201ENSMUST00000199661 110 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 mt-Tv-201ENSMUST00000082389 69 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Gm25788-201ENSMUST00000082721 131 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Gm22743-201ENSMUST00000083445 133 ntBASIC1.97□□□□□ -2.09
Ldb3Q9JKS4 Gm26421-201ENSMUST00000104279 132 ntBASIC1.96□□□□□ -2.1
Ldb3Q9JKS4 Gm23654-201ENSMUST00000116758 126 ntBASIC1.96□□□□□ -2.1
Ldb3Q9JKS4 Gm22888-201ENSMUST00000158640 77 ntBASIC1.96□□□□□ -2.1
Ldb3Q9JKS4 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.96□□□□□ -2.1
Ldb3Q9JKS4 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.96□□□□□ -2.1
Ldb3Q9JKS4 Gm23507-201ENSMUST00000083078 107 ntBASIC1.96□□□□□ -2.1
Ldb3Q9JKS4 Snora3-201ENSMUST00000083082 132 ntBASIC1.96□□□□□ -2.1
Ldb3Q9JKS4 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Ldb3Q9JKS4 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.95□□□□□ -2.1
Ldb3Q9JKS4 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms