Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.1□□□□□ -2.39
Trem1Q9JKE2 Gm43944-201ENSMUST00000205220 120 ntBASIC0.1□□□□□ -2.39
Trem1Q9JKE2 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.09□□□□□ -2.39
Trem1Q9JKE2 Gm15069-201ENSMUST00000117792 192 ntBASIC0.09□□□□□ -2.4
Trem1Q9JKE2 Gm15068-201ENSMUST00000119796 192 ntBASIC0.09□□□□□ -2.4
Trem1Q9JKE2 Gm13246-201ENSMUST00000120994 315 ntBASIC0.09□□□□□ -2.4
Trem1Q9JKE2 Gm25976-201ENSMUST00000158695 130 ntBASIC0.09□□□□□ -2.4
Trem1Q9JKE2 Gm23242-201ENSMUST00000083055 107 ntBASIC0.09□□□□□ -2.4
Trem1Q9JKE2 Mir410-201ENSMUST00000083563 81 ntBASIC0.09□□□□□ -2.4
Trem1Q9JKE2 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.09□□□□□ -2.4
Trem1Q9JKE2 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm22003-201ENSMUST00000101885 107 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm22032-201ENSMUST00000116946 116 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm23991-201ENSMUST00000117033 93 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm26482-201ENSMUST00000158015 62 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm22118-201ENSMUST00000175593 171 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm23410-201ENSMUST00000179967 107 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm22756-201ENSMUST00000180118 107 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm24415-201ENSMUST00000180218 107 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm28579-201ENSMUST00000186143 369 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm22505-201ENSMUST00000082956 108 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm22363-201ENSMUST00000083100 108 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm23814-201ENSMUST00000083230 102 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Gm23095-201ENSMUST00000083446 107 ntBASIC0.08□□□□□ -2.4
Trem1Q9JKE2 Mir710-201ENSMUST00000102088 110 ntBASIC0.07□□□□□ -2.4
Trem1Q9JKE2 Gm11248-201ENSMUST00000119568 201 ntBASIC0.07□□□□□ -2.4
Trem1Q9JKE2 Gm22520-201ENSMUST00000158269 129 ntBASIC0.07□□□□□ -2.4
Trem1Q9JKE2 Gm37313-201ENSMUST00000191673 290 ntBASIC0.07□□□□□ -2.4
Trem1Q9JKE2 Gm44457-201ENSMUST00000198109 76 ntBASIC0.07□□□□□ -2.4
Trem1Q9JKE2 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.07□□□□□ -2.4
Trem1Q9JKE2 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Gm25170-201ENSMUST00000104191 129 ntBASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Gm22673-201ENSMUST00000104415 131 ntBASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Gm23321-201ENSMUST00000104465 126 ntBASIC0.06□□□□□ -2.4
Trem1Q9JKE2 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Gm25494-201ENSMUST00000158143 100 ntBASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Mir8107-201ENSMUST00000184024 117 ntBASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Gm44464-201ENSMUST00000198010 138 ntBASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.06□□□□□ -2.4
Trem1Q9JKE2 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Gm7240-201ENSMUST00000220769 664 ntBASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Snord82-201ENSMUST00000082889 70 ntBASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Gm22576-201ENSMUST00000083733 104 ntBASIC0.06□□□□□ -2.4
Trem1Q9JKE2 Gm25875-201ENSMUST00000104323 107 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm24509-201ENSMUST00000157086 101 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm25358-201ENSMUST00000157189 101 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm24559-201ENSMUST00000157519 121 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm24737-201ENSMUST00000158861 100 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm26194-201ENSMUST00000175036 71 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm22450-201ENSMUST00000179641 107 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm25473-201ENSMUST00000180191 107 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm27668-201ENSMUST00000184188 120 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Mir6390-201ENSMUST00000184405 129 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm25142-201ENSMUST00000082698 107 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm24856-201ENSMUST00000082809 107 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm26071-201ENSMUST00000083261 107 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Mir10b-201ENSMUST00000083566 68 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm24521-201ENSMUST00000083958 107 ntBASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Trem1Q9JKE2 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Trem1Q9JKE2 Gm14919-201ENSMUST00000120839 390 ntBASIC0.04□□□□□ -2.4
Trem1Q9JKE2 Gm15213-201ENSMUST00000122098 216 ntBASIC0.04□□□□□ -2.4
Trem1Q9JKE2 Gm25424-201ENSMUST00000157612 58 ntBASIC0.04□□□□□ -2.4
Trem1Q9JKE2 Gm23008-201ENSMUST00000158946 80 ntBASIC0.04□□□□□ -2.4
Trem1Q9JKE2 Mir5624-201ENSMUST00000176635 61 ntBASIC0.04□□□□□ -2.4
Trem1Q9JKE2 Gm25820-201ENSMUST00000198589 127 ntBASIC0.04□□□□□ -2.4
Trem1Q9JKE2 Gm42506-201ENSMUST00000202009 150 ntBASIC0.04□□□□□ -2.4
Trem1Q9JKE2 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.04□□□□□ -2.4
Trem1Q9JKE2 Mir532-201ENSMUST00000093630 96 ntBASIC0.04□□□□□ -2.4
Trem1Q9JKE2 Gm13922-201ENSMUST00000119505 156 ntBASIC0.03□□□□□ -2.4
Trem1Q9JKE2 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.03□□□□□ -2.4
Trem1Q9JKE2 Gm24728-201ENSMUST00000158226 125 ntBASIC0.03□□□□□ -2.4
Trem1Q9JKE2 Gm23761-201ENSMUST00000158347 104 ntBASIC0.03□□□□□ -2.4
Trem1Q9JKE2 Mir7229-201ENSMUST00000197062 53 ntBASIC0.03□□□□□ -2.4
Trem1Q9JKE2 Gm45005-201ENSMUST00000206640 157 ntBASIC0.03□□□□□ -2.4
Trem1Q9JKE2 Gm44563-201ENSMUST00000207958 178 ntBASIC0.03□□□□□ -2.4
Trem1Q9JKE2 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.03□□□□□ -2.4
Trem1Q9JKE2 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.03□□□□□ -2.4
Trem1Q9JKE2 Gm22753-201ENSMUST00000083657 107 ntBASIC0.03□□□□□ -2.4
Trem1Q9JKE2 Gm11904-201ENSMUST00000120562 248 ntBASIC0.02□□□□□ -2.41
Trem1Q9JKE2 Gm24635-201ENSMUST00000122712 128 ntBASIC0.02□□□□□ -2.41
Trem1Q9JKE2 Gm22767-201ENSMUST00000158365 165 ntBASIC0.02□□□□□ -2.41
Trem1Q9JKE2 Gm26123-201ENSMUST00000083363 135 ntBASIC0.02□□□□□ -2.41
Trem1Q9JKE2 Gm23821-201ENSMUST00000158738 106 ntBASIC0.01□□□□□ -2.41
Trem1Q9JKE2 Gm27402-201ENSMUST00000183890 120 ntBASIC0.01□□□□□ -2.41
Trem1Q9JKE2 Mir6394-201ENSMUST00000184738 99 ntBASIC0.01□□□□□ -2.41
Trem1Q9JKE2 Gm38109-201ENSMUST00000195386 181 ntBASIC0.01□□□□□ -2.41
Trem1Q9JKE2 Gm37404-201ENSMUST00000195726 359 ntBASIC0.01□□□□□ -2.41
Trem1Q9JKE2 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.01□□□□□ -2.41
Trem1Q9JKE2 Gm44858-201ENSMUST00000207360 154 ntBASIC0.01□□□□□ -2.41
Trem1Q9JKE2 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.01□□□□□ -2.41
Trem1Q9JKE2 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Trem1Q9JKE2 Mir224-201ENSMUST00000083608 82 ntBASIC0.01□□□□□ -2.41
Trem1Q9JKE2 Mir670-201ENSMUST00000102380 100 ntBASIC0□□□□□ -2.41
Trem1Q9JKE2 Gm26076-201ENSMUST00000104065 105 ntBASIC0□□□□□ -2.41
Trem1Q9JKE2 Gm25323-201ENSMUST00000122555 103 ntBASIC0□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 142.4 ms