Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-0.53□□□□□ -2.49
Trem3Q9JKE1 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
Trem3Q9JKE1 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.54□□□□□ -2.5
Trem3Q9JKE1 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.54□□□□□ -2.5
Trem3Q9JKE1 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.54□□□□□ -2.5
Trem3Q9JKE1 Mir465d-201ENSMUST00000196314 58 ntBASIC-0.54□□□□□ -2.5
Trem3Q9JKE1 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.54□□□□□ -2.5
Trem3Q9JKE1 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.54□□□□□ -2.5
Trem3Q9JKE1 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.54□□□□□ -2.5
Trem3Q9JKE1 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.55□□□□□ -2.5
Trem3Q9JKE1 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.55□□□□□ -2.5
Trem3Q9JKE1 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.55□□□□□ -2.5
Trem3Q9JKE1 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
Trem3Q9JKE1 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.55□□□□□ -2.5
Trem3Q9JKE1 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.55□□□□□ -2.5
Trem3Q9JKE1 AC154484.1-201ENSMUST00000227311 771 ntBASIC-0.55□□□□□ -2.5
Trem3Q9JKE1 AC132918.1-201ENSMUST00000227877 925 ntBASIC-0.55□□□□□ -2.5
Trem3Q9JKE1 Gm24037-201ENSMUST00000082871 180 ntBASIC-0.55□□□□□ -2.5
Trem3Q9JKE1 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
Trem3Q9JKE1 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.56□□□□□ -2.5
Trem3Q9JKE1 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.56□□□□□ -2.5
Trem3Q9JKE1 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.56□□□□□ -2.5
Trem3Q9JKE1 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.56□□□□□ -2.5
Trem3Q9JKE1 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 Gm14293-201ENSMUST00000118528 577 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 Gm9227-201ENSMUST00000194733 566 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 AC116589.4-201ENSMUST00000222390 216 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.57□□□□□ -2.5
Trem3Q9JKE1 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm11407-201ENSMUST00000120362 1058 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm26424-201ENSMUST00000122530 104 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm23571-201ENSMUST00000180073 127 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm38183-201ENSMUST00000193189 205 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm23627-201ENSMUST00000082459 107 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm22502-201ENSMUST00000082488 107 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm22977-201ENSMUST00000082615 107 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 Gm24149-201ENSMUST00000082757 107 ntBASIC-0.58□□□□□ -2.5
Trem3Q9JKE1 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.59□□□□□ -2.5
Trem3Q9JKE1 Gm14574-201ENSMUST00000120644 279 ntBASIC-0.59□□□□□ -2.5
Trem3Q9JKE1 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.59□□□□□ -2.5
Trem3Q9JKE1 Gm23474-201ENSMUST00000158884 75 ntBASIC-0.59□□□□□ -2.5
Trem3Q9JKE1 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.59□□□□□ -2.5
Trem3Q9JKE1 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.59□□□□□ -2.5
Trem3Q9JKE1 AC166358.7-201ENSMUST00000221132 108 ntBASIC-0.59□□□□□ -2.5
Trem3Q9JKE1 AC125543.5-201ENSMUST00000222799 108 ntBASIC-0.59□□□□□ -2.5
Trem3Q9JKE1 Mir200b-201ENSMUST00000083615 70 ntBASIC-0.59□□□□□ -2.5
Trem3Q9JKE1 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.6□□□□□ -2.51
Trem3Q9JKE1 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.6□□□□□ -2.51
Trem3Q9JKE1 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.6□□□□□ -2.51
Trem3Q9JKE1 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.6□□□□□ -2.51
Trem3Q9JKE1 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-0.6□□□□□ -2.51
Trem3Q9JKE1 AC132437.1-201ENSMUST00000218308 320 ntBASIC-0.6□□□□□ -2.51
Trem3Q9JKE1 Gm23097-201ENSMUST00000083448 105 ntBASIC-0.6□□□□□ -2.51
Trem3Q9JKE1 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
Trem3Q9JKE1 Gm14039-201ENSMUST00000118705 101 ntBASIC-0.61□□□□□ -2.51
Trem3Q9JKE1 Gm25109-201ENSMUST00000122474 114 ntBASIC-0.61□□□□□ -2.51
Trem3Q9JKE1 Gm22598-201ENSMUST00000157600 127 ntBASIC-0.61□□□□□ -2.51
Trem3Q9JKE1 Gm23379-201ENSMUST00000180026 107 ntBASIC-0.61□□□□□ -2.51
Trem3Q9JKE1 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.61□□□□□ -2.51
Trem3Q9JKE1 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.61□□□□□ -2.51
Trem3Q9JKE1 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.61□□□□□ -2.51
Trem3Q9JKE1 Gm22149-201ENSMUST00000104442 136 ntBASIC-0.62□□□□□ -2.51
Trem3Q9JKE1 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.62□□□□□ -2.51
Trem3Q9JKE1 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.62□□□□□ -2.51
Trem3Q9JKE1 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
Trem3Q9JKE1 Gm26400-201ENSMUST00000175012 85 ntBASIC-0.62□□□□□ -2.51
Trem3Q9JKE1 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.62□□□□□ -2.51
Trem3Q9JKE1 Mir7039-201ENSMUST00000183852 85 ntBASIC-0.62□□□□□ -2.51
Trem3Q9JKE1 Gm37338-201ENSMUST00000191986 127 ntBASIC-0.62□□□□□ -2.51
Trem3Q9JKE1 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.62□□□□□ -2.51
Trem3Q9JKE1 AC192616.1-201ENSMUST00000221922 132 ntBASIC-0.62□□□□□ -2.51
Trem3Q9JKE1 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.63□□□□□ -2.51
Trem3Q9JKE1 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.63□□□□□ -2.51
Trem3Q9JKE1 Gm15002-201ENSMUST00000118406 452 ntBASIC-0.63□□□□□ -2.51
Trem3Q9JKE1 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.63□□□□□ -2.51
Trem3Q9JKE1 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.63□□□□□ -2.51
Trem3Q9JKE1 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.63□□□□□ -2.51
Trem3Q9JKE1 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.63□□□□□ -2.51
Trem3Q9JKE1 Gm44308-201ENSMUST00000197080 99 ntBASIC-0.63□□□□□ -2.51
Trem3Q9JKE1 Gm26495-201ENSMUST00000083152 137 ntBASIC-0.63□□□□□ -2.51
Trem3Q9JKE1 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.63□□□□□ -2.51
Trem3Q9JKE1 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
Trem3Q9JKE1 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms