Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Snord69-201ENSMUST00000104024 80 ntBASIC0.15□□□□□ -2.39
Lima1Q9ERG0 Gm12771-201ENSMUST00000120246 135 ntBASIC0.15□□□□□ -2.39
Lima1Q9ERG0 Gm26255-201ENSMUST00000122492 103 ntBASIC0.15□□□□□ -2.39
Lima1Q9ERG0 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Lima1Q9ERG0 Gm27723-201ENSMUST00000157398 63 ntBASIC0.15□□□□□ -2.39
Lima1Q9ERG0 Gm22553-201ENSMUST00000157797 295 ntBASIC0.15□□□□□ -2.39
Lima1Q9ERG0 Gm24547-201ENSMUST00000158649 149 ntBASIC0.15□□□□□ -2.39
Lima1Q9ERG0 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.15□□□□□ -2.39
Lima1Q9ERG0 Gm29512-201ENSMUST00000185544 315 ntBASIC0.15□□□□□ -2.39
Lima1Q9ERG0 Mir219b-201ENSMUST00000198317 65 ntBASIC0.15□□□□□ -2.39
Lima1Q9ERG0 Gm44490-201ENSMUST00000198566 127 ntBASIC0.15□□□□□ -2.39
Lima1Q9ERG0 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.14□□□□□ -2.39
Lima1Q9ERG0 Gm24833-201ENSMUST00000116775 120 ntBASIC0.14□□□□□ -2.39
Lima1Q9ERG0 Gm23838-201ENSMUST00000158067 162 ntBASIC0.14□□□□□ -2.39
Lima1Q9ERG0 Gm22387-201ENSMUST00000158191 131 ntBASIC0.14□□□□□ -2.39
Lima1Q9ERG0 Gm24549-201ENSMUST00000158647 139 ntBASIC0.14□□□□□ -2.39
Lima1Q9ERG0 Gm22466-201ENSMUST00000175278 69 ntBASIC0.14□□□□□ -2.39
Lima1Q9ERG0 Mir6377-201ENSMUST00000183760 114 ntBASIC0.14□□□□□ -2.39
Lima1Q9ERG0 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.14□□□□□ -2.39
Lima1Q9ERG0 Gm29665-201ENSMUST00000191457 528 ntBASIC0.14□□□□□ -2.39
Lima1Q9ERG0 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.14□□□□□ -2.39
Lima1Q9ERG0 Gm25814-201ENSMUST00000082754 107 ntBASIC0.14□□□□□ -2.39
Lima1Q9ERG0 Mir224-201ENSMUST00000083608 82 ntBASIC0.14□□□□□ -2.39
Lima1Q9ERG0 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.13□□□□□ -2.39
Lima1Q9ERG0 Mir759-201ENSMUST00000103254 98 ntBASIC0.13□□□□□ -2.39
Lima1Q9ERG0 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.13□□□□□ -2.39
Lima1Q9ERG0 Gm26479-201ENSMUST00000122620 106 ntBASIC0.13□□□□□ -2.39
Lima1Q9ERG0 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.13□□□□□ -2.39
Lima1Q9ERG0 Gm25300-201ENSMUST00000175284 84 ntBASIC0.13□□□□□ -2.39
Lima1Q9ERG0 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.13□□□□□ -2.39
Lima1Q9ERG0 Gm28579-201ENSMUST00000186143 369 ntBASIC0.13□□□□□ -2.39
Lima1Q9ERG0 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.13□□□□□ -2.39
Lima1Q9ERG0 Gm19572-201ENSMUST00000214326 338 ntBASIC0.13□□□□□ -2.39
Lima1Q9ERG0 Gm24171-201ENSMUST00000104126 131 ntBASIC0.12□□□□□ -2.39
Lima1Q9ERG0 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.12□□□□□ -2.39
Lima1Q9ERG0 Gm22984-201ENSMUST00000122751 122 ntBASIC0.12□□□□□ -2.39
Lima1Q9ERG0 Gm25375-201ENSMUST00000158157 135 ntBASIC0.12□□□□□ -2.39
Lima1Q9ERG0 Gm25718-201ENSMUST00000158632 118 ntBASIC0.12□□□□□ -2.39
Lima1Q9ERG0 Gm22239-201ENSMUST00000175220 103 ntBASIC0.12□□□□□ -2.39
Lima1Q9ERG0 Gm45673-201ENSMUST00000210293 358 ntBASIC0.12□□□□□ -2.39
Lima1Q9ERG0 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.12□□□□□ -2.39
Lima1Q9ERG0 Gm23140-201ENSMUST00000082487 107 ntBASIC0.12□□□□□ -2.39
Lima1Q9ERG0 Gm23242-201ENSMUST00000083055 107 ntBASIC0.12□□□□□ -2.39
Lima1Q9ERG0 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.12□□□□□ -2.39
Lima1Q9ERG0 Gm23347-201ENSMUST00000083823 82 ntBASIC0.12□□□□□ -2.39
Lima1Q9ERG0 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Lima1Q9ERG0 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm23531-201ENSMUST00000104567 68 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm23989-201ENSMUST00000117030 66 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm15069-201ENSMUST00000117792 192 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm15068-201ENSMUST00000119796 192 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm13246-201ENSMUST00000120994 315 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm13725-201ENSMUST00000122139 207 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm22340-201ENSMUST00000157717 114 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm26482-201ENSMUST00000158015 62 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm22431-201ENSMUST00000158545 107 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm24415-201ENSMUST00000180218 107 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm27980-201ENSMUST00000184094 169 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm36189-201ENSMUST00000204113 523 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm43944-201ENSMUST00000205220 120 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm7240-201ENSMUST00000220769 664 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm24208-201ENSMUST00000082783 135 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm25793-201ENSMUST00000083287 107 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.11□□□□□ -2.39
Lima1Q9ERG0 Gm24275-201ENSMUST00000116780 146 ntBASIC0.1□□□□□ -2.39
Lima1Q9ERG0 Gm22032-201ENSMUST00000116946 116 ntBASIC0.1□□□□□ -2.39
Lima1Q9ERG0 Scarna8-201ENSMUST00000158333 131 ntBASIC0.1□□□□□ -2.39
Lima1Q9ERG0 Gm25161-201ENSMUST00000158913 132 ntBASIC0.1□□□□□ -2.39
Lima1Q9ERG0 Gm22118-201ENSMUST00000175593 171 ntBASIC0.1□□□□□ -2.39
Lima1Q9ERG0 Gm22887-201ENSMUST00000178586 107 ntBASIC0.1□□□□□ -2.39
Lima1Q9ERG0 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.1□□□□□ -2.39
Lima1Q9ERG0 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.1□□□□□ -2.39
Lima1Q9ERG0 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Lima1Q9ERG0 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Lima1Q9ERG0 Mir1197-201ENSMUST00000117037 120 ntBASIC0.09□□□□□ -2.4
Lima1Q9ERG0 Gm26194-201ENSMUST00000175036 71 ntBASIC0.09□□□□□ -2.4
Lima1Q9ERG0 Gm25247-201ENSMUST00000175475 90 ntBASIC0.09□□□□□ -2.4
Lima1Q9ERG0 Mir3108-201ENSMUST00000175500 79 ntBASIC0.09□□□□□ -2.4
Lima1Q9ERG0 Gm37313-201ENSMUST00000191673 290 ntBASIC0.09□□□□□ -2.4
Lima1Q9ERG0 Gm44457-201ENSMUST00000198109 76 ntBASIC0.09□□□□□ -2.4
Lima1Q9ERG0 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.09□□□□□ -2.4
Lima1Q9ERG0 Gm45616-201ENSMUST00000211711 319 ntBASIC0.09□□□□□ -2.4
Lima1Q9ERG0 Gm3702-201ENSMUST00000211754 346 ntBASIC0.09□□□□□ -2.4
Lima1Q9ERG0 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.09□□□□□ -2.4
Lima1Q9ERG0 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.09□□□□□ -2.4
Lima1Q9ERG0 Gm16186-201ENSMUST00000120132 216 ntBASIC0.08□□□□□ -2.4
Lima1Q9ERG0 Gm22520-201ENSMUST00000158269 129 ntBASIC0.08□□□□□ -2.4
Lima1Q9ERG0 Gm23761-201ENSMUST00000158347 104 ntBASIC0.08□□□□□ -2.4
Lima1Q9ERG0 Gm24737-201ENSMUST00000158861 100 ntBASIC0.08□□□□□ -2.4
Lima1Q9ERG0 Gm25241-201ENSMUST00000174909 84 ntBASIC0.08□□□□□ -2.4
Lima1Q9ERG0 Gm26217-201ENSMUST00000175212 84 ntBASIC0.08□□□□□ -2.4
Lima1Q9ERG0 Gm25952-201ENSMUST00000175329 74 ntBASIC0.08□□□□□ -2.4
Lima1Q9ERG0 Mir6390-201ENSMUST00000184405 129 ntBASIC0.08□□□□□ -2.4
Lima1Q9ERG0 Gm44464-201ENSMUST00000198010 138 ntBASIC0.08□□□□□ -2.4
Lima1Q9ERG0 Gm22576-201ENSMUST00000083733 104 ntBASIC0.08□□□□□ -2.4
Lima1Q9ERG0 Gm25875-201ENSMUST00000104323 107 ntBASIC0.07□□□□□ -2.4
Lima1Q9ERG0 Gm24509-201ENSMUST00000157086 101 ntBASIC0.07□□□□□ -2.4
Lima1Q9ERG0 Gm25358-201ENSMUST00000157189 101 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 146.2 ms