Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm22233-201ENSMUST00000157464 114 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm25868-201ENSMUST00000158253 114 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm38183-201ENSMUST00000193189 205 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm36189-201ENSMUST00000204113 523 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm22358-201ENSMUST00000082877 122 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm22421-201ENSMUST00000083058 107 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm25188-201ENSMUST00000083913 122 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm28669-201ENSMUST00000188400 100 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm44976-201ENSMUST00000205543 261 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm7240-201ENSMUST00000220769 664 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm24494-201ENSMUST00000083804 81 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm23749-201ENSMUST00000104223 131 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm25110-201ENSMUST00000116684 121 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm25775-201ENSMUST00000116716 121 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm24795-201ENSMUST00000116737 121 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm25171-201ENSMUST00000116926 121 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm11904-201ENSMUST00000120562 248 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm24392-201ENSMUST00000158136 103 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm26287-201ENSMUST00000158887 81 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm24667-201ENSMUST00000158938 103 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm25538-201ENSMUST00000101943 107 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Gm24559-201ENSMUST00000157519 121 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Gm25664-201ENSMUST00000157697 107 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Gm29490-201ENSMUST00000190923 342 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Mir3970-201ENSMUST00000199287 90 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Gm45673-201ENSMUST00000210293 358 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Snora19-201ENSMUST00000082962 132 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Gm23658-201ENSMUST00000083233 132 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Gm24423-201ENSMUST00000101982 106 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm22545-201ENSMUST00000104350 132 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm11792-201ENSMUST00000120640 168 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm25318-201ENSMUST00000122554 314 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm25323-201ENSMUST00000122555 103 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm23214-201ENSMUST00000122716 157 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm25267-201ENSMUST00000158522 63 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Mir6951-201ENSMUST00000183910 75 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm44373-201ENSMUST00000196112 169 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm22809-201ENSMUST00000082743 156 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm25851-201ENSMUST00000082794 107 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm26497-201ENSMUST00000083146 107 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm42855-201ENSMUST00000197388 253 ntBASIC0.78□□□□□ -2.29
Scn4aQ9ER60 Gm26123-201ENSMUST00000083363 135 ntBASIC0.78□□□□□ -2.29
Scn4aQ9ER60 Gm24764-201ENSMUST00000083686 199 ntBASIC0.78□□□□□ -2.29
Scn4aQ9ER60 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm14671-201ENSMUST00000121790 262 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm22450-201ENSMUST00000179641 107 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm25473-201ENSMUST00000180191 107 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm38274-201ENSMUST00000195689 148 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm24856-201ENSMUST00000082809 107 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm24204-201ENSMUST00000082950 107 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm26071-201ENSMUST00000083261 107 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Mir34a-201ENSMUST00000083559 102 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm24521-201ENSMUST00000083958 107 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Scn4aQ9ER60 Gm24171-201ENSMUST00000104126 131 ntBASIC0.76□□□□□ -2.29
Scn4aQ9ER60 Gm22586-201ENSMUST00000157507 122 ntBASIC0.76□□□□□ -2.29
Scn4aQ9ER60 Gm22387-201ENSMUST00000158191 131 ntBASIC0.76□□□□□ -2.29
Scn4aQ9ER60 Mir6364-201ENSMUST00000183396 86 ntBASIC0.76□□□□□ -2.29
Scn4aQ9ER60 Gm25512-201ENSMUST00000083863 107 ntBASIC0.76□□□□□ -2.29
Scn4aQ9ER60 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Gm23113-201ENSMUST00000158477 99 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Gm43505-201ENSMUST00000200579 139 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 mt-Tr-201ENSMUST00000082412 68 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Gm25855-201ENSMUST00000082787 72 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Gm24042-201ENSMUST00000083114 103 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Gm23672-201ENSMUST00000157471 107 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Gm23130-201ENSMUST00000104252 74 ntBASIC0.74□□□□□ -2.29
Scn4aQ9ER60 Gm23584-201ENSMUST00000157655 129 ntBASIC0.74□□□□□ -2.29
Scn4aQ9ER60 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.74□□□□□ -2.29
Scn4aQ9ER60 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.74□□□□□ -2.29
Scn4aQ9ER60 Gm24000-201ENSMUST00000158063 89 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm16539-201ENSMUST00000160086 327 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Mir3089-201ENSMUST00000175350 84 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Mir3079-201ENSMUST00000175428 90 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm27672-201ENSMUST00000183751 204 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm27365-201ENSMUST00000184041 177 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm18213-201ENSMUST00000207850 178 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm24453-201ENSMUST00000083346 76 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Mir875-201ENSMUST00000104698 78 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm13246-201ENSMUST00000120994 315 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm22888-201ENSMUST00000158640 77 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm28016-201ENSMUST00000184594 196 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Gm37715-201ENSMUST00000193206 235 ntBASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Gm23299-201ENSMUST00000082708 79 ntBASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Gm22686-201ENSMUST00000082847 100 ntBASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 171.5 ms