Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
Upf1Q9EPU0 Gm14626-201ENSMUST00000117619 216 ntBASIC2.47□□□□□ -2.01
Upf1Q9EPU0 Gm26345-201ENSMUST00000157534 120 ntBASIC2.47□□□□□ -2.01
Upf1Q9EPU0 Gm25994-201ENSMUST00000175392 101 ntBASIC2.47□□□□□ -2.01
Upf1Q9EPU0 Mir7665-201ENSMUST00000184907 63 ntBASIC2.47□□□□□ -2.01
Upf1Q9EPU0 Gm19257-201ENSMUST00000186121 183 ntBASIC2.47□□□□□ -2.01
Upf1Q9EPU0 Snora3-201ENSMUST00000083082 132 ntBASIC2.47□□□□□ -2.01
Upf1Q9EPU0 Mir490-201ENSMUST00000093567 84 ntBASIC2.47□□□□□ -2.01
Upf1Q9EPU0 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Upf1Q9EPU0 Gm14671-201ENSMUST00000121790 262 ntBASIC2.46□□□□□ -2.02
Upf1Q9EPU0 Gm37557-201ENSMUST00000191640 139 ntBASIC2.46□□□□□ -2.02
Upf1Q9EPU0 Gm8031-201ENSMUST00000213430 626 ntBASIC2.46□□□□□ -2.02
Upf1Q9EPU0 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.46□□□□□ -2.02
Upf1Q9EPU0 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.46□□□□□ -2.02
Upf1Q9EPU0 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
Upf1Q9EPU0 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Upf1Q9EPU0 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.45□□□□□ -2.02
Upf1Q9EPU0 Gm8219-201ENSMUST00000218309 242 ntBASIC2.45□□□□□ -2.02
Upf1Q9EPU0 Gm22683-201ENSMUST00000082854 137 ntBASIC2.45□□□□□ -2.02
Upf1Q9EPU0 Gm25402-201ENSMUST00000082966 131 ntBASIC2.45□□□□□ -2.02
Upf1Q9EPU0 Gm25628-201ENSMUST00000084002 105 ntBASIC2.45□□□□□ -2.02
Upf1Q9EPU0 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Upf1Q9EPU0 Gm14502-201ENSMUST00000118154 113 ntBASIC2.44□□□□□ -2.02
Upf1Q9EPU0 Gm16328-201ENSMUST00000126985 196 ntBASIC2.44□□□□□ -2.02
Upf1Q9EPU0 Gm25769-201ENSMUST00000158569 127 ntBASIC2.44□□□□□ -2.02
Upf1Q9EPU0 Gm22888-201ENSMUST00000158640 77 ntBASIC2.44□□□□□ -2.02
Upf1Q9EPU0 Gm25368-201ENSMUST00000158847 131 ntBASIC2.44□□□□□ -2.02
Upf1Q9EPU0 Gm29604-201ENSMUST00000187176 163 ntBASIC2.44□□□□□ -2.02
Upf1Q9EPU0 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.44□□□□□ -2.02
Upf1Q9EPU0 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Upf1Q9EPU0 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.43□□□□□ -2.02
Upf1Q9EPU0 Gm23277-201ENSMUST00000157914 136 ntBASIC2.43□□□□□ -2.02
Upf1Q9EPU0 Mir344-201ENSMUST00000083634 95 ntBASIC2.43□□□□□ -2.02
Upf1Q9EPU0 Gm22828-201ENSMUST00000083768 107 ntBASIC2.43□□□□□ -2.02
Upf1Q9EPU0 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Upf1Q9EPU0 Gm22545-201ENSMUST00000104350 132 ntBASIC2.42□□□□□ -2.02
Upf1Q9EPU0 Gm11644-201ENSMUST00000119735 150 ntBASIC2.42□□□□□ -2.02
Upf1Q9EPU0 Gm14709-201ENSMUST00000121225 304 ntBASIC2.42□□□□□ -2.02
Upf1Q9EPU0 Gm24475-201ENSMUST00000157435 143 ntBASIC2.42□□□□□ -2.02
Upf1Q9EPU0 Gm24000-201ENSMUST00000158063 89 ntBASIC2.42□□□□□ -2.02
Upf1Q9EPU0 Gm23181-201ENSMUST00000158685 110 ntBASIC2.42□□□□□ -2.02
Upf1Q9EPU0 Gm24345-201ENSMUST00000158706 124 ntBASIC2.42□□□□□ -2.02
Upf1Q9EPU0 Gm45522-201ENSMUST00000210784 166 ntBASIC2.42□□□□□ -2.02
Upf1Q9EPU0 Gm22283-201ENSMUST00000082556 161 ntBASIC2.42□□□□□ -2.02
Upf1Q9EPU0 Gm23445-201ENSMUST00000082800 107 ntBASIC2.42□□□□□ -2.02
Upf1Q9EPU0 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.41□□□□□ -2.02
Upf1Q9EPU0 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Upf1Q9EPU0 Gm22554-201ENSMUST00000157798 147 ntBASIC2.41□□□□□ -2.02
Upf1Q9EPU0 Gm24747-201ENSMUST00000157835 87 ntBASIC2.41□□□□□ -2.02
Upf1Q9EPU0 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.41□□□□□ -2.02
Upf1Q9EPU0 Mir6985-201ENSMUST00000184641 61 ntBASIC2.41□□□□□ -2.02
Upf1Q9EPU0 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Upf1Q9EPU0 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.4□□□□□ -2.02
Upf1Q9EPU0 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Upf1Q9EPU0 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.4□□□□□ -2.03
Upf1Q9EPU0 Gm23044-201ENSMUST00000157891 100 ntBASIC2.4□□□□□ -2.03
Upf1Q9EPU0 Gm25771-201ENSMUST00000158565 144 ntBASIC2.4□□□□□ -2.03
Upf1Q9EPU0 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.4□□□□□ -2.03
Upf1Q9EPU0 Gm43898-201ENSMUST00000204456 424 ntBASIC2.4□□□□□ -2.03
Upf1Q9EPU0 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.4□□□□□ -2.03
Upf1Q9EPU0 Gm23303-201ENSMUST00000082714 152 ntBASIC2.4□□□□□ -2.03
Upf1Q9EPU0 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Upf1Q9EPU0 Gm22469-201ENSMUST00000104118 133 ntBASIC2.39□□□□□ -2.03
Upf1Q9EPU0 Gm26420-201ENSMUST00000104273 103 ntBASIC2.39□□□□□ -2.03
Upf1Q9EPU0 Gm14588-201ENSMUST00000119895 172 ntBASIC2.39□□□□□ -2.03
Upf1Q9EPU0 Gm23223-201ENSMUST00000158119 127 ntBASIC2.39□□□□□ -2.03
Upf1Q9EPU0 Gm23859-201ENSMUST00000158383 64 ntBASIC2.39□□□□□ -2.03
Upf1Q9EPU0 Gm24656-201ENSMUST00000177548 132 ntBASIC2.39□□□□□ -2.03
Upf1Q9EPU0 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.39□□□□□ -2.03
Upf1Q9EPU0 Gm24705-201ENSMUST00000082808 107 ntBASIC2.39□□□□□ -2.03
Upf1Q9EPU0 Snord104-201ENSMUST00000083192 70 ntBASIC2.39□□□□□ -2.03
Upf1Q9EPU0 Gm24412-201ENSMUST00000083426 109 ntBASIC2.39□□□□□ -2.03
Upf1Q9EPU0 Gm24449-201ENSMUST00000083985 106 ntBASIC2.39□□□□□ -2.03
Upf1Q9EPU0 Mir880-201ENSMUST00000104809 78 ntBASIC2.38□□□□□ -2.03
Upf1Q9EPU0 Gm23996-201ENSMUST00000158062 131 ntBASIC2.38□□□□□ -2.03
Upf1Q9EPU0 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.38□□□□□ -2.03
Upf1Q9EPU0 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.38□□□□□ -2.03
Upf1Q9EPU0 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Upf1Q9EPU0 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Upf1Q9EPU0 Gm26301-201ENSMUST00000104813 95 ntBASIC2.37□□□□□ -2.03
Upf1Q9EPU0 Snord87-201ENSMUST00000175437 87 ntBASIC2.37□□□□□ -2.03
Upf1Q9EPU0 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.37□□□□□ -2.03
Upf1Q9EPU0 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Upf1Q9EPU0 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.36□□□□□ -2.03
Upf1Q9EPU0 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.36□□□□□ -2.03
Upf1Q9EPU0 Gm25060-201ENSMUST00000157374 130 ntBASIC2.36□□□□□ -2.03
Upf1Q9EPU0 Gm24902-201ENSMUST00000158126 123 ntBASIC2.36□□□□□ -2.03
Upf1Q9EPU0 Gm22093-201ENSMUST00000158980 111 ntBASIC2.36□□□□□ -2.03
Upf1Q9EPU0 Mir669j-201ENSMUST00000179023 121 ntBASIC2.36□□□□□ -2.03
Upf1Q9EPU0 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.36□□□□□ -2.03
Upf1Q9EPU0 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Upf1Q9EPU0 Gm22761-201ENSMUST00000102278 96 ntBASIC2.35□□□□□ -2.03
Upf1Q9EPU0 Gm11334-201ENSMUST00000121969 156 ntBASIC2.35□□□□□ -2.03
Upf1Q9EPU0 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.35□□□□□ -2.03
Upf1Q9EPU0 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Upf1Q9EPU0 Gm26084-201ENSMUST00000157903 104 ntBASIC2.35□□□□□ -2.03
Upf1Q9EPU0 Gm23033-201ENSMUST00000157996 134 ntBASIC2.35□□□□□ -2.03
Upf1Q9EPU0 Gm24769-201ENSMUST00000158506 129 ntBASIC2.35□□□□□ -2.03
Upf1Q9EPU0 Gm26073-201ENSMUST00000179906 127 ntBASIC2.35□□□□□ -2.03
Upf1Q9EPU0 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms