Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm37338-201ENSMUST00000191986 127 ntBASIC0.06□□□□□ -2.4
Chmp2aQ9DB34 Gm7240-201ENSMUST00000220769 664 ntBASIC0.06□□□□□ -2.4
Chmp2aQ9DB34 Gm24527-201ENSMUST00000082920 107 ntBASIC0.06□□□□□ -2.4
Chmp2aQ9DB34 Gm23412-201ENSMUST00000083017 107 ntBASIC0.06□□□□□ -2.4
Chmp2aQ9DB34 Gm22364-201ENSMUST00000083097 98 ntBASIC0.06□□□□□ -2.4
Chmp2aQ9DB34 Gm24453-201ENSMUST00000083346 76 ntBASIC0.06□□□□□ -2.4
Chmp2aQ9DB34 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.06□□□□□ -2.4
Chmp2aQ9DB34 Gm25300-201ENSMUST00000175284 84 ntBASIC0.05□□□□□ -2.4
Chmp2aQ9DB34 Gm23375-201ENSMUST00000175407 83 ntBASIC0.05□□□□□ -2.4
Chmp2aQ9DB34 Gm23571-201ENSMUST00000180073 127 ntBASIC0.05□□□□□ -2.4
Chmp2aQ9DB34 Mir7229-201ENSMUST00000197062 53 ntBASIC0.05□□□□□ -2.4
Chmp2aQ9DB34 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.05□□□□□ -2.4
Chmp2aQ9DB34 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Chmp2aQ9DB34 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Chmp2aQ9DB34 Gm24555-201ENSMUST00000104548 124 ntBASIC0.04□□□□□ -2.4
Chmp2aQ9DB34 Gm23989-201ENSMUST00000117030 66 ntBASIC0.04□□□□□ -2.4
Chmp2aQ9DB34 Mir532-201ENSMUST00000093630 96 ntBASIC0.04□□□□□ -2.4
Chmp2aQ9DB34 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Chmp2aQ9DB34 Gm26401-201ENSMUST00000158502 76 ntBASIC0.03□□□□□ -2.4
Chmp2aQ9DB34 Gm22466-201ENSMUST00000175278 69 ntBASIC0.03□□□□□ -2.4
Chmp2aQ9DB34 Gm37763-201ENSMUST00000193445 120 ntBASIC0.03□□□□□ -2.4
Chmp2aQ9DB34 Gm44464-201ENSMUST00000198010 138 ntBASIC0.03□□□□□ -2.4
Chmp2aQ9DB34 Gm44455-201ENSMUST00000200061 82 ntBASIC0.03□□□□□ -2.4
Chmp2aQ9DB34 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.03□□□□□ -2.4
Chmp2aQ9DB34 Gm25814-201ENSMUST00000082754 107 ntBASIC0.03□□□□□ -2.4
Chmp2aQ9DB34 Gm22753-201ENSMUST00000083657 107 ntBASIC0.03□□□□□ -2.4
Chmp2aQ9DB34 Gm22576-201ENSMUST00000083733 104 ntBASIC0.03□□□□□ -2.4
Chmp2aQ9DB34 Gm24594-201ENSMUST00000122502 99 ntBASIC0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm24547-201ENSMUST00000158649 149 ntBASIC0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm27997-201ENSMUST00000184942 69 ntBASIC0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm44387-201ENSMUST00000196298 145 ntBASIC0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm45673-201ENSMUST00000210293 358 ntBASIC0.02□□□□□ -2.41
Chmp2aQ9DB34 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.02□□□□□ -2.41
Chmp2aQ9DB34 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.02□□□□□ -2.41
Chmp2aQ9DB34 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.02□□□□□ -2.41
Chmp2aQ9DB34 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.02□□□□□ -2.41
Chmp2aQ9DB34 Snord42a-201ENSMUST00000082606 65 ntBASIC0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm22984-201ENSMUST00000122751 122 ntBASIC0.01□□□□□ -2.41
Chmp2aQ9DB34 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.01□□□□□ -2.41
Chmp2aQ9DB34 Gm23845-201ENSMUST00000083834 152 ntBASIC0.01□□□□□ -2.41
Chmp2aQ9DB34 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
Chmp2aQ9DB34 Gm26076-201ENSMUST00000104065 105 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 Gm26293-201ENSMUST00000104170 84 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 Gm25773-201ENSMUST00000116718 127 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 Gm16186-201ENSMUST00000120132 216 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 Gm24509-201ENSMUST00000157086 101 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 Gm25358-201ENSMUST00000157189 101 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 Gm24559-201ENSMUST00000157519 121 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 Gm22553-201ENSMUST00000157797 295 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 Gm29140-201ENSMUST00000190187 476 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0□□□□□ -2.41
Chmp2aQ9DB34 Gm36189-201ENSMUST00000204113 523 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 Gm43944-201ENSMUST00000205220 120 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0□□□□□ -2.41
Chmp2aQ9DB34 Snord95-201ENSMUST00000082846 68 ntBASIC0□□□□□ -2.41
Chmp2aQ9DB34 Gm13801-201ENSMUST00000120750 160 ntBASIC-0.01□□□□□ -2.41
Chmp2aQ9DB34 Gm22887-201ENSMUST00000178586 107 ntBASIC-0.01□□□□□ -2.41
Chmp2aQ9DB34 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.01□□□□□ -2.41
Chmp2aQ9DB34 AC164117.2-201ENSMUST00000222090 327 ntBASIC-0.01□□□□□ -2.41
Chmp2aQ9DB34 AC116319.1-201ENSMUST00000227765 222 ntBASIC-0.01□□□□□ -2.41
Chmp2aQ9DB34 Gm25703-201ENSMUST00000083123 151 ntBASIC-0.01□□□□□ -2.41
Chmp2aQ9DB34 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.01□□□□□ -2.41
Chmp2aQ9DB34 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm27723-201ENSMUST00000157398 63 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm25494-201ENSMUST00000158143 100 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Mir100-201ENSMUST00000175270 80 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm44490-201ENSMUST00000198566 127 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 AC153526.1-201ENSMUST00000219750 190 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.02□□□□□ -2.41
Chmp2aQ9DB34 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.03□□□□□ -2.41
Chmp2aQ9DB34 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.03□□□□□ -2.41
Chmp2aQ9DB34 Gm12771-201ENSMUST00000120246 135 ntBASIC-0.03□□□□□ -2.41
Chmp2aQ9DB34 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.03□□□□□ -2.41
Chmp2aQ9DB34 Gm22387-201ENSMUST00000158191 131 ntBASIC-0.03□□□□□ -2.41
Chmp2aQ9DB34 Gm24737-201ENSMUST00000158861 100 ntBASIC-0.03□□□□□ -2.41
Chmp2aQ9DB34 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.03□□□□□ -2.41
Chmp2aQ9DB34 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.03□□□□□ -2.41
Chmp2aQ9DB34 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.03□□□□□ -2.41
Chmp2aQ9DB34 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.04□□□□□ -2.42
Chmp2aQ9DB34 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.04□□□□□ -2.42
Chmp2aQ9DB34 Gm12924-201ENSMUST00000121747 318 ntBASIC-0.04□□□□□ -2.42
Chmp2aQ9DB34 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.04□□□□□ -2.42
Chmp2aQ9DB34 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.04□□□□□ -2.42
Chmp2aQ9DB34 Gm25473-201ENSMUST00000180191 107 ntBASIC-0.04□□□□□ -2.42
Chmp2aQ9DB34 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.04□□□□□ -2.42
Chmp2aQ9DB34 Gm24856-201ENSMUST00000082809 107 ntBASIC-0.04□□□□□ -2.42
Chmp2aQ9DB34 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 141.3 ms