Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm24275-201ENSMUST00000116780 146 ntBASIC0.26□□□□□ -2.37
Ccdc3Q9D6Y1 Gm22984-201ENSMUST00000122751 122 ntBASIC0.26□□□□□ -2.37
Ccdc3Q9D6Y1 Gm23024-201ENSMUST00000158770 292 ntBASIC0.26□□□□□ -2.37
Ccdc3Q9D6Y1 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.26□□□□□ -2.37
Ccdc3Q9D6Y1 Gm29140-201ENSMUST00000190187 476 ntBASIC0.26□□□□□ -2.37
Ccdc3Q9D6Y1 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.26□□□□□ -2.37
Ccdc3Q9D6Y1 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.26□□□□□ -2.37
Ccdc3Q9D6Y1 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.26□□□□□ -2.37
Ccdc3Q9D6Y1 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.26□□□□□ -2.37
Ccdc3Q9D6Y1 Snora20-201ENSMUST00000082703 128 ntBASIC0.26□□□□□ -2.37
Ccdc3Q9D6Y1 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.25□□□□□ -2.37
Ccdc3Q9D6Y1 Gm26090-201ENSMUST00000157897 128 ntBASIC0.25□□□□□ -2.37
Ccdc3Q9D6Y1 Gm44211-201ENSMUST00000204867 145 ntBASIC0.25□□□□□ -2.37
Ccdc3Q9D6Y1 Mir547-201ENSMUST00000102051 78 ntBASIC0.24□□□□□ -2.37
Ccdc3Q9D6Y1 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Ccdc3Q9D6Y1 Gm22709-201ENSMUST00000116893 111 ntBASIC0.24□□□□□ -2.37
Ccdc3Q9D6Y1 Gm14039-201ENSMUST00000118705 101 ntBASIC0.24□□□□□ -2.37
Ccdc3Q9D6Y1 Gm14301-201ENSMUST00000120181 324 ntBASIC0.24□□□□□ -2.37
Ccdc3Q9D6Y1 Gm12924-201ENSMUST00000121747 318 ntBASIC0.24□□□□□ -2.37
Ccdc3Q9D6Y1 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.24□□□□□ -2.37
Ccdc3Q9D6Y1 Gm38183-201ENSMUST00000193189 205 ntBASIC0.24□□□□□ -2.37
Ccdc3Q9D6Y1 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.24□□□□□ -2.37
Ccdc3Q9D6Y1 Gm45544-201ENSMUST00000211130 88 ntBASIC0.24□□□□□ -2.37
Ccdc3Q9D6Y1 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.23□□□□□ -2.37
Ccdc3Q9D6Y1 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Ccdc3Q9D6Y1 Gm27723-201ENSMUST00000157398 63 ntBASIC0.23□□□□□ -2.37
Ccdc3Q9D6Y1 Gm23838-201ENSMUST00000158067 162 ntBASIC0.23□□□□□ -2.37
Ccdc3Q9D6Y1 Gm22983-201ENSMUST00000158308 104 ntBASIC0.23□□□□□ -2.37
Ccdc3Q9D6Y1 Mir1933-201ENSMUST00000158930 88 ntBASIC0.23□□□□□ -2.37
Ccdc3Q9D6Y1 Gm22801-201ENSMUST00000175624 84 ntBASIC0.23□□□□□ -2.37
Ccdc3Q9D6Y1 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.23□□□□□ -2.37
Ccdc3Q9D6Y1 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Ccdc3Q9D6Y1 Gm13725-201ENSMUST00000122139 207 ntBASIC0.22□□□□□ -2.37
Ccdc3Q9D6Y1 Gm23853-201ENSMUST00000158375 104 ntBASIC0.22□□□□□ -2.37
Ccdc3Q9D6Y1 Gm27402-201ENSMUST00000183890 120 ntBASIC0.22□□□□□ -2.37
Ccdc3Q9D6Y1 Gm29665-201ENSMUST00000191457 528 ntBASIC0.22□□□□□ -2.37
Ccdc3Q9D6Y1 Gm38109-201ENSMUST00000195386 181 ntBASIC0.22□□□□□ -2.37
Ccdc3Q9D6Y1 Gm44464-201ENSMUST00000198010 138 ntBASIC0.22□□□□□ -2.37
Ccdc3Q9D6Y1 Gm44055-201ENSMUST00000204376 247 ntBASIC0.22□□□□□ -2.37
Ccdc3Q9D6Y1 Gm44057-201ENSMUST00000204547 96 ntBASIC0.22□□□□□ -2.37
Ccdc3Q9D6Y1 Gm22048-201ENSMUST00000104721 89 ntBASIC0.21□□□□□ -2.38
Ccdc3Q9D6Y1 Gm14671-201ENSMUST00000121790 262 ntBASIC0.21□□□□□ -2.38
Ccdc3Q9D6Y1 Gm25885-201ENSMUST00000157779 109 ntBASIC0.21□□□□□ -2.38
Ccdc3Q9D6Y1 Gm24501-201ENSMUST00000158452 62 ntBASIC0.21□□□□□ -2.38
Ccdc3Q9D6Y1 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.21□□□□□ -2.38
Ccdc3Q9D6Y1 Mir6377-201ENSMUST00000183760 114 ntBASIC0.21□□□□□ -2.38
Ccdc3Q9D6Y1 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Ccdc3Q9D6Y1 Mir759-201ENSMUST00000103254 98 ntBASIC0.2□□□□□ -2.38
Ccdc3Q9D6Y1 Snord69-201ENSMUST00000104024 80 ntBASIC0.2□□□□□ -2.38
Ccdc3Q9D6Y1 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
Ccdc3Q9D6Y1 Gm26479-201ENSMUST00000122620 106 ntBASIC0.2□□□□□ -2.38
Ccdc3Q9D6Y1 Gm22321-201ENSMUST00000157152 104 ntBASIC0.2□□□□□ -2.38
Ccdc3Q9D6Y1 Gm16307-201ENSMUST00000161269 210 ntBASIC0.2□□□□□ -2.38
Ccdc3Q9D6Y1 Gm23416-201ENSMUST00000175520 95 ntBASIC0.2□□□□□ -2.38
Ccdc3Q9D6Y1 Gm37404-201ENSMUST00000195726 359 ntBASIC0.2□□□□□ -2.38
Ccdc3Q9D6Y1 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.2□□□□□ -2.38
Ccdc3Q9D6Y1 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.2□□□□□ -2.38
Ccdc3Q9D6Y1 Gm23242-201ENSMUST00000083055 107 ntBASIC0.2□□□□□ -2.38
Ccdc3Q9D6Y1 Gm25110-201ENSMUST00000116684 121 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm25775-201ENSMUST00000116716 121 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm24795-201ENSMUST00000116737 121 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm25171-201ENSMUST00000116926 121 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm12797-201ENSMUST00000118645 273 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm13801-201ENSMUST00000120750 160 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm25882-201ENSMUST00000157784 85 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm23571-201ENSMUST00000180073 127 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm27717-201ENSMUST00000183933 151 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm29512-201ENSMUST00000185544 315 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm45541-201ENSMUST00000210443 54 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm24527-201ENSMUST00000082920 107 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm22571-201ENSMUST00000082984 70 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm24453-201ENSMUST00000083346 76 ntBASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
Ccdc3Q9D6Y1 Gm15289-201ENSMUST00000117793 244 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm22553-201ENSMUST00000157797 295 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm22520-201ENSMUST00000158269 129 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm22450-201ENSMUST00000179641 107 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm25473-201ENSMUST00000180191 107 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm27475-201ENSMUST00000183420 61 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Mir7065-201ENSMUST00000185110 61 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm28418-201ENSMUST00000186179 423 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm28849-201ENSMUST00000188127 174 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm28211-201ENSMUST00000190920 315 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm36189-201ENSMUST00000204113 523 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm44563-201ENSMUST00000207958 178 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm7240-201ENSMUST00000220769 664 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm24856-201ENSMUST00000082809 107 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm26071-201ENSMUST00000083261 107 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 Gm24521-201ENSMUST00000083958 107 ntBASIC0.18□□□□□ -2.38
Ccdc3Q9D6Y1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.17□□□□□ -2.38
Ccdc3Q9D6Y1 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.17□□□□□ -2.38
Ccdc3Q9D6Y1 Gm22887-201ENSMUST00000178586 107 ntBASIC0.17□□□□□ -2.38
Ccdc3Q9D6Y1 Gm23186-201ENSMUST00000180078 107 ntBASIC0.17□□□□□ -2.38
Ccdc3Q9D6Y1 Gm44977-201ENSMUST00000205283 420 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 242.2 ms