Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm24443-201ENSMUST00000157242 132 ntBASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Gm23761-201ENSMUST00000158347 104 ntBASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Gm24637-201ENSMUST00000158674 85 ntBASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Mir6376-201ENSMUST00000185149 131 ntBASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Gm37104-201ENSMUST00000193278 196 ntBASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Gm20108-201ENSMUST00000219977 153 ntBASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.72□□□□□ -1.97
Trim42Q9D2H5 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trim42Q9D2H5 Gm26339-201ENSMUST00000102368 99 ntBASIC2.71□□□□□ -1.98
Trim42Q9D2H5 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.71□□□□□ -1.98
Trim42Q9D2H5 Gm44325-201ENSMUST00000196757 77 ntBASIC2.71□□□□□ -1.98
Trim42Q9D2H5 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.71□□□□□ -1.98
Trim42Q9D2H5 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.71□□□□□ -1.98
Trim42Q9D2H5 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trim42Q9D2H5 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.7□□□□□ -1.98
Trim42Q9D2H5 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.7□□□□□ -1.98
Trim42Q9D2H5 Snora36b-201ENSMUST00000104383 132 ntBASIC2.7□□□□□ -1.98
Trim42Q9D2H5 Gm25884-201ENSMUST00000157782 62 ntBASIC2.7□□□□□ -1.98
Trim42Q9D2H5 Gm22651-201ENSMUST00000157872 94 ntBASIC2.7□□□□□ -1.98
Trim42Q9D2H5 Gm24436-201ENSMUST00000157889 302 ntBASIC2.7□□□□□ -1.98
Trim42Q9D2H5 Gm26073-201ENSMUST00000179906 127 ntBASIC2.7□□□□□ -1.98
Trim42Q9D2H5 Gm27786-201ENSMUST00000184337 70 ntBASIC2.7□□□□□ -1.98
Trim42Q9D2H5 Mir21c-201ENSMUST00000184910 78 ntBASIC2.7□□□□□ -1.98
Trim42Q9D2H5 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.7□□□□□ -1.98
Trim42Q9D2H5 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.69□□□□□ -1.98
Trim42Q9D2H5 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.69□□□□□ -1.98
Trim42Q9D2H5 Gm22605-201ENSMUST00000158289 108 ntBASIC2.69□□□□□ -1.98
Trim42Q9D2H5 Gm22089-201ENSMUST00000158336 102 ntBASIC2.69□□□□□ -1.98
Trim42Q9D2H5 Gm27783-201ENSMUST00000183534 105 ntBASIC2.69□□□□□ -1.98
Trim42Q9D2H5 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.69□□□□□ -1.98
Trim42Q9D2H5 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trim42Q9D2H5 Gm24138-201ENSMUST00000157572 114 ntBASIC2.68□□□□□ -1.98
Trim42Q9D2H5 Gm23065-201ENSMUST00000158236 130 ntBASIC2.68□□□□□ -1.98
Trim42Q9D2H5 Gm22503-201ENSMUST00000158983 115 ntBASIC2.68□□□□□ -1.98
Trim42Q9D2H5 Gm27878-201ENSMUST00000184000 106 ntBASIC2.68□□□□□ -1.98
Trim42Q9D2H5 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Trim42Q9D2H5 Gm24038-201ENSMUST00000082872 159 ntBASIC2.68□□□□□ -1.98
Trim42Q9D2H5 Gm25696-201ENSMUST00000082900 105 ntBASIC2.68□□□□□ -1.98
Trim42Q9D2H5 Gm25697-201ENSMUST00000082902 98 ntBASIC2.68□□□□□ -1.98
Trim42Q9D2H5 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Trim42Q9D2H5 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.68□□□□□ -1.98
Trim42Q9D2H5 Gm25466-201ENSMUST00000103995 132 ntBASIC2.67□□□□□ -1.98
Trim42Q9D2H5 Gm22677-201ENSMUST00000116977 108 ntBASIC2.67□□□□□ -1.98
Trim42Q9D2H5 Gm25270-201ENSMUST00000122606 138 ntBASIC2.67□□□□□ -1.98
Trim42Q9D2H5 Gm25371-201ENSMUST00000158162 101 ntBASIC2.67□□□□□ -1.98
Trim42Q9D2H5 Gm24082-201ENSMUST00000175175 83 ntBASIC2.67□□□□□ -1.98
Trim42Q9D2H5 Gm27987-201ENSMUST00000184023 93 ntBASIC2.67□□□□□ -1.98
Trim42Q9D2H5 Trbv25-201ENSMUST00000194700 273 ntBASIC2.67□□□□□ -1.98
Trim42Q9D2H5 Gm3702-201ENSMUST00000211754 346 ntBASIC2.67□□□□□ -1.98
Trim42Q9D2H5 mt-Tl2-201ENSMUST00000082417 71 ntBASIC2.67□□□□□ -1.98
Trim42Q9D2H5 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.66□□□□□ -1.98
Trim42Q9D2H5 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trim42Q9D2H5 Mir802-201ENSMUST00000103258 97 ntBASIC2.66□□□□□ -1.98
Trim42Q9D2H5 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Trim42Q9D2H5 Gm14389-201ENSMUST00000140453 241 ntBASIC2.66□□□□□ -1.98
Trim42Q9D2H5 Gm22731-201ENSMUST00000158086 94 ntBASIC2.66□□□□□ -1.98
Trim42Q9D2H5 Gm22522-201ENSMUST00000158271 151 ntBASIC2.66□□□□□ -1.98
Trim42Q9D2H5 Gm16584-201ENSMUST00000159267 189 ntBASIC2.66□□□□□ -1.98
Trim42Q9D2H5 Gm20718-201ENSMUST00000176058 259 ntBASIC2.66□□□□□ -1.98
Trim42Q9D2H5 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trim42Q9D2H5 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trim42Q9D2H5 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.66□□□□□ -1.98
Trim42Q9D2H5 Gm25308-201ENSMUST00000104171 158 ntBASIC2.65□□□□□ -1.99
Trim42Q9D2H5 Gm22023-201ENSMUST00000104354 130 ntBASIC2.65□□□□□ -1.99
Trim42Q9D2H5 Gm22999-201ENSMUST00000157082 88 ntBASIC2.65□□□□□ -1.99
Trim42Q9D2H5 Gm24000-201ENSMUST00000158063 89 ntBASIC2.65□□□□□ -1.99
Trim42Q9D2H5 Gm23181-201ENSMUST00000158685 110 ntBASIC2.65□□□□□ -1.99
Trim42Q9D2H5 Gm25229-201ENSMUST00000178587 79 ntBASIC2.65□□□□□ -1.99
Trim42Q9D2H5 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.65□□□□□ -1.99
Trim42Q9D2H5 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.65□□□□□ -1.99
Trim42Q9D2H5 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
Trim42Q9D2H5 Gm25329-201ENSMUST00000158041 126 ntBASIC2.64□□□□□ -1.99
Trim42Q9D2H5 Gm42795-201ENSMUST00000198847 76 ntBASIC2.64□□□□□ -1.99
Trim42Q9D2H5 Snora20-201ENSMUST00000082703 128 ntBASIC2.64□□□□□ -1.99
Trim42Q9D2H5 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.64□□□□□ -1.99
Trim42Q9D2H5 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.64□□□□□ -1.99
Trim42Q9D2H5 Gm24982-201ENSMUST00000104456 132 ntBASIC2.63□□□□□ -1.99
Trim42Q9D2H5 Gm22497-201ENSMUST00000104499 131 ntBASIC2.63□□□□□ -1.99
Trim42Q9D2H5 Gm24681-201ENSMUST00000158760 107 ntBASIC2.63□□□□□ -1.99
Trim42Q9D2H5 Mir7578-201ENSMUST00000183455 82 ntBASIC2.63□□□□□ -1.99
Trim42Q9D2H5 Mir6237-201ENSMUST00000183808 91 ntBASIC2.63□□□□□ -1.99
Trim42Q9D2H5 Mir3961-201ENSMUST00000198795 59 ntBASIC2.63□□□□□ -1.99
Trim42Q9D2H5 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.63□□□□□ -1.99
Trim42Q9D2H5 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Trim42Q9D2H5 Gm22939-201ENSMUST00000103958 131 ntBASIC2.62□□□□□ -1.99
Trim42Q9D2H5 Gm14588-201ENSMUST00000119895 172 ntBASIC2.62□□□□□ -1.99
Trim42Q9D2H5 Gm23860-201ENSMUST00000179446 132 ntBASIC2.62□□□□□ -1.99
Trim42Q9D2H5 Mir7242-201ENSMUST00000183710 79 ntBASIC2.62□□□□□ -1.99
Trim42Q9D2H5 Gm27639-201ENSMUST00000184937 85 ntBASIC2.62□□□□□ -1.99
Trim42Q9D2H5 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.62□□□□□ -1.99
Trim42Q9D2H5 Gm22458-201ENSMUST00000082576 107 ntBASIC2.62□□□□□ -1.99
Trim42Q9D2H5 Gm25855-201ENSMUST00000082787 72 ntBASIC2.62□□□□□ -1.99
Trim42Q9D2H5 Gm25644-201ENSMUST00000083209 107 ntBASIC2.62□□□□□ -1.99
Trim42Q9D2H5 Mir301-201ENSMUST00000083655 86 ntBASIC2.62□□□□□ -1.99
Trim42Q9D2H5 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Trim42Q9D2H5 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim42Q9D2H5 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Trim42Q9D2H5 Gm26080-201ENSMUST00000104069 131 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 186.9 ms