Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.07□□□□□ -2.24
Vps28Q9D1C8 Gm23130-201ENSMUST00000104252 74 ntBASIC1.06□□□□□ -2.24
Vps28Q9D1C8 Gm22145-201ENSMUST00000157396 148 ntBASIC1.06□□□□□ -2.24
Vps28Q9D1C8 Gm26090-201ENSMUST00000157897 128 ntBASIC1.06□□□□□ -2.24
Vps28Q9D1C8 Mir8119-201ENSMUST00000183371 129 ntBASIC1.06□□□□□ -2.24
Vps28Q9D1C8 Gm45471-201ENSMUST00000211270 281 ntBASIC1.06□□□□□ -2.24
Vps28Q9D1C8 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.06□□□□□ -2.24
Vps28Q9D1C8 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.06□□□□□ -2.24
Vps28Q9D1C8 Gm24929-201ENSMUST00000083403 139 ntBASIC1.06□□□□□ -2.24
Vps28Q9D1C8 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.06□□□□□ -2.24
Vps28Q9D1C8 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Gm26293-201ENSMUST00000104170 84 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Gm12771-201ENSMUST00000120246 135 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Gm24559-201ENSMUST00000157519 121 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Gm24401-201ENSMUST00000157868 91 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Mir1961-201ENSMUST00000158643 112 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Gm27332-201ENSMUST00000184893 112 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Gm6003-201ENSMUST00000187903 463 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Gm18213-201ENSMUST00000207850 178 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Mir196b-201ENSMUST00000083509 85 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Mir22-201ENSMUST00000083595 95 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Mir324-201ENSMUST00000083600 89 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Rny1-201ENSMUST00000083767 112 ntBASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Vps28Q9D1C8 Gm13922-201ENSMUST00000119505 156 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Gm25828-201ENSMUST00000157087 95 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Gm24777-201ENSMUST00000157644 107 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Gm25015-201ENSMUST00000158400 128 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Gm16404-201ENSMUST00000177739 468 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Gm14598-201ENSMUST00000180109 468 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Gm14625-201ENSMUST00000180231 468 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Mir6380-201ENSMUST00000184334 81 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Gm42533-201ENSMUST00000196247 157 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Mir468-201ENSMUST00000197332 78 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Gm44464-201ENSMUST00000198010 138 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Gm22809-201ENSMUST00000082743 156 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Snord35a-201ENSMUST00000083884 90 ntBASIC1.04□□□□□ -2.24
Vps28Q9D1C8 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Vps28Q9D1C8 Snord19-201ENSMUST00000104609 76 ntBASIC1.03□□□□□ -2.24
Vps28Q9D1C8 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.03□□□□□ -2.24
Vps28Q9D1C8 Gm22433-201ENSMUST00000158550 142 ntBASIC1.03□□□□□ -2.24
Vps28Q9D1C8 Gm25166-201ENSMUST00000158909 111 ntBASIC1.03□□□□□ -2.24
Vps28Q9D1C8 Gm20118-201ENSMUST00000187207 162 ntBASIC1.03□□□□□ -2.24
Vps28Q9D1C8 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.03□□□□□ -2.24
Vps28Q9D1C8 Gm18188-201ENSMUST00000219386 478 ntBASIC1.03□□□□□ -2.24
Vps28Q9D1C8 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.03□□□□□ -2.24
Vps28Q9D1C8 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Vps28Q9D1C8 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Vps28Q9D1C8 Gm12432-201ENSMUST00000119540 186 ntBASIC1.02□□□□□ -2.25
Vps28Q9D1C8 Gm24015-201ENSMUST00000157725 232 ntBASIC1.02□□□□□ -2.25
Vps28Q9D1C8 Gm25749-201ENSMUST00000175485 111 ntBASIC1.02□□□□□ -2.25
Vps28Q9D1C8 Gm23893-201ENSMUST00000158106 134 ntBASIC1.01□□□□□ -2.25
Vps28Q9D1C8 Gm25223-201ENSMUST00000158200 110 ntBASIC1.01□□□□□ -2.25
Vps28Q9D1C8 Gm27476-201ENSMUST00000183366 104 ntBASIC1.01□□□□□ -2.25
Vps28Q9D1C8 Gm44409-201ENSMUST00000198810 166 ntBASIC1.01□□□□□ -2.25
Vps28Q9D1C8 Gm22744-201ENSMUST00000083444 65 ntBASIC1.01□□□□□ -2.25
Vps28Q9D1C8 Gm25895-201ENSMUST00000083714 100 ntBASIC1.01□□□□□ -2.25
Vps28Q9D1C8 Gm24431-201ENSMUST00000104073 66 ntBASIC1□□□□□ -2.25
Vps28Q9D1C8 Gm24020-201ENSMUST00000180156 108 ntBASIC1□□□□□ -2.25
Vps28Q9D1C8 Gm27974-201ENSMUST00000183415 105 ntBASIC1□□□□□ -2.25
Vps28Q9D1C8 Gm44948-201ENSMUST00000209050 149 ntBASIC1□□□□□ -2.25
Vps28Q9D1C8 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.99□□□□□ -2.25
Vps28Q9D1C8 Gm26301-201ENSMUST00000104813 95 ntBASIC0.99□□□□□ -2.25
Vps28Q9D1C8 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.99□□□□□ -2.25
Vps28Q9D1C8 Gm25715-201ENSMUST00000158627 125 ntBASIC0.99□□□□□ -2.25
Vps28Q9D1C8 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Vps28Q9D1C8 Gm27672-201ENSMUST00000183751 204 ntBASIC0.99□□□□□ -2.25
Vps28Q9D1C8 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.99□□□□□ -2.25
Vps28Q9D1C8 Gm24762-201ENSMUST00000083689 104 ntBASIC0.99□□□□□ -2.25
Vps28Q9D1C8 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Vps28Q9D1C8 Gm25494-201ENSMUST00000158143 100 ntBASIC0.98□□□□□ -2.25
Vps28Q9D1C8 Gm25044-201ENSMUST00000158603 104 ntBASIC0.98□□□□□ -2.25
Vps28Q9D1C8 Mir7663-201ENSMUST00000183950 61 ntBASIC0.98□□□□□ -2.25
Vps28Q9D1C8 Mir27b-201ENSMUST00000083541 73 ntBASIC0.98□□□□□ -2.25
Vps28Q9D1C8 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.98□□□□□ -2.25
Vps28Q9D1C8 Mir669g-201ENSMUST00000116809 123 ntBASIC0.97□□□□□ -2.25
Vps28Q9D1C8 Gm38364-201ENSMUST00000191814 179 ntBASIC0.97□□□□□ -2.25
Vps28Q9D1C8 Gm19790-201ENSMUST00000214414 251 ntBASIC0.97□□□□□ -2.25
Vps28Q9D1C8 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Vps28Q9D1C8 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Vps28Q9D1C8 Gm26279-201ENSMUST00000157095 102 ntBASIC0.96□□□□□ -2.26
Vps28Q9D1C8 Gm26358-201ENSMUST00000158215 97 ntBASIC0.96□□□□□ -2.26
Vps28Q9D1C8 Gm22425-201ENSMUST00000158532 138 ntBASIC0.96□□□□□ -2.26
Vps28Q9D1C8 Gm23375-201ENSMUST00000175407 83 ntBASIC0.96□□□□□ -2.26
Vps28Q9D1C8 Gm25464-201ENSMUST00000175481 107 ntBASIC0.96□□□□□ -2.26
Vps28Q9D1C8 Mir1954-201ENSMUST00000175595 86 ntBASIC0.96□□□□□ -2.26
Vps28Q9D1C8 Mir6905-201ENSMUST00000184228 70 ntBASIC0.96□□□□□ -2.26
Vps28Q9D1C8 Mir33-201ENSMUST00000083531 69 ntBASIC0.96□□□□□ -2.26
Vps28Q9D1C8 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.96□□□□□ -2.26
Vps28Q9D1C8 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.96□□□□□ -2.26
Vps28Q9D1C8 Gm26156-201ENSMUST00000116999 123 ntBASIC0.95□□□□□ -2.26
Vps28Q9D1C8 Gm23545-201ENSMUST00000158205 104 ntBASIC0.95□□□□□ -2.26
Vps28Q9D1C8 Gm26160-201ENSMUST00000158965 63 ntBASIC0.95□□□□□ -2.26
Vps28Q9D1C8 Gm23141-201ENSMUST00000178682 94 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms