Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm26360-201ENSMUST00000158872 103 ntBASIC1.62□□□□□ -2.15
Ddx56Q9D0R4 Gm23339-201ENSMUST00000158962 139 ntBASIC1.62□□□□□ -2.15
Ddx56Q9D0R4 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.62□□□□□ -2.15
Ddx56Q9D0R4 Mir451a-201ENSMUST00000093557 72 ntBASIC1.62□□□□□ -2.15
Ddx56Q9D0R4 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.61□□□□□ -2.15
Ddx56Q9D0R4 Mir466h-201ENSMUST00000104748 81 ntBASIC1.61□□□□□ -2.15
Ddx56Q9D0R4 Gm15115-201ENSMUST00000121145 264 ntBASIC1.61□□□□□ -2.15
Ddx56Q9D0R4 Snord13-201ENSMUST00000157627 104 ntBASIC1.61□□□□□ -2.15
Ddx56Q9D0R4 Gm22989-201ENSMUST00000158313 86 ntBASIC1.61□□□□□ -2.15
Ddx56Q9D0R4 Snora24-201ENSMUST00000174989 130 ntBASIC1.61□□□□□ -2.15
Ddx56Q9D0R4 Gm22862-201ENSMUST00000178593 121 ntBASIC1.61□□□□□ -2.15
Ddx56Q9D0R4 Mir7017-201ENSMUST00000184894 62 ntBASIC1.61□□□□□ -2.15
Ddx56Q9D0R4 Gm44358-201ENSMUST00000196301 98 ntBASIC1.61□□□□□ -2.15
Ddx56Q9D0R4 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.61□□□□□ -2.15
Ddx56Q9D0R4 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.6□□□□□ -2.15
Ddx56Q9D0R4 Gm22148-201ENSMUST00000104445 107 ntBASIC1.6□□□□□ -2.15
Ddx56Q9D0R4 Gm27493-201ENSMUST00000184128 78 ntBASIC1.6□□□□□ -2.15
Ddx56Q9D0R4 Gm37997-201ENSMUST00000193515 267 ntBASIC1.6□□□□□ -2.15
Ddx56Q9D0R4 Gm26224-201ENSMUST00000082506 80 ntBASIC1.6□□□□□ -2.15
Ddx56Q9D0R4 Gm24457-201ENSMUST00000083196 105 ntBASIC1.6□□□□□ -2.15
Ddx56Q9D0R4 Gm23245-201ENSMUST00000083370 135 ntBASIC1.6□□□□□ -2.15
Ddx56Q9D0R4 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Ddx56Q9D0R4 Gm23010-201ENSMUST00000104151 126 ntBASIC1.59□□□□□ -2.15
Ddx56Q9D0R4 Gm25316-201ENSMUST00000116826 118 ntBASIC1.59□□□□□ -2.15
Ddx56Q9D0R4 Gm24808-201ENSMUST00000157993 118 ntBASIC1.59□□□□□ -2.15
Ddx56Q9D0R4 Gm25128-201ENSMUST00000083339 76 ntBASIC1.59□□□□□ -2.15
Ddx56Q9D0R4 Mir320-201ENSMUST00000083594 82 ntBASIC1.59□□□□□ -2.15
Ddx56Q9D0R4 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Ddx56Q9D0R4 Gm22999-201ENSMUST00000157082 88 ntBASIC1.58□□□□□ -2.16
Ddx56Q9D0R4 Gm25771-201ENSMUST00000158565 144 ntBASIC1.58□□□□□ -2.16
Ddx56Q9D0R4 Gm23864-201ENSMUST00000177607 107 ntBASIC1.58□□□□□ -2.16
Ddx56Q9D0R4 Gm27711-201ENSMUST00000183802 118 ntBASIC1.58□□□□□ -2.16
Ddx56Q9D0R4 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.58□□□□□ -2.16
Ddx56Q9D0R4 Gm23951-201ENSMUST00000104029 132 ntBASIC1.57□□□□□ -2.16
Ddx56Q9D0R4 Gm23048-201ENSMUST00000157237 129 ntBASIC1.57□□□□□ -2.16
Ddx56Q9D0R4 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.57□□□□□ -2.16
Ddx56Q9D0R4 Gm22129-201ENSMUST00000179034 107 ntBASIC1.57□□□□□ -2.16
Ddx56Q9D0R4 Gm27365-201ENSMUST00000184041 177 ntBASIC1.57□□□□□ -2.16
Ddx56Q9D0R4 Gm44962-201ENSMUST00000206460 279 ntBASIC1.57□□□□□ -2.16
Ddx56Q9D0R4 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.57□□□□□ -2.16
Ddx56Q9D0R4 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Ddx56Q9D0R4 Gm25992-201ENSMUST00000102437 109 ntBASIC1.56□□□□□ -2.16
Ddx56Q9D0R4 Gm16539-201ENSMUST00000160086 327 ntBASIC1.56□□□□□ -2.16
Ddx56Q9D0R4 Gm23567-201ENSMUST00000178005 107 ntBASIC1.56□□□□□ -2.16
Ddx56Q9D0R4 Gm11857-201ENSMUST00000119817 324 ntBASIC1.55□□□□□ -2.16
Ddx56Q9D0R4 Gm23558-201ENSMUST00000157823 80 ntBASIC1.55□□□□□ -2.16
Ddx56Q9D0R4 Gm27265-201ENSMUST00000183559 77 ntBASIC1.55□□□□□ -2.16
Ddx56Q9D0R4 Gm28256-201ENSMUST00000188953 139 ntBASIC1.55□□□□□ -2.16
Ddx56Q9D0R4 Gm28559-201ENSMUST00000190532 139 ntBASIC1.55□□□□□ -2.16
Ddx56Q9D0R4 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.55□□□□□ -2.16
Ddx56Q9D0R4 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.55□□□□□ -2.16
Ddx56Q9D0R4 Gm26225-201ENSMUST00000082508 135 ntBASIC1.55□□□□□ -2.16
Ddx56Q9D0R4 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Ddx56Q9D0R4 Gm22750-201ENSMUST00000102076 103 ntBASIC1.54□□□□□ -2.16
Ddx56Q9D0R4 Gm22559-201ENSMUST00000157329 134 ntBASIC1.54□□□□□ -2.16
Ddx56Q9D0R4 Gm23114-201ENSMUST00000158478 117 ntBASIC1.54□□□□□ -2.16
Ddx56Q9D0R4 Snord47-201ENSMUST00000083034 77 ntBASIC1.54□□□□□ -2.16
Ddx56Q9D0R4 Gm22482-201ENSMUST00000122563 359 ntBASIC1.53□□□□□ -2.16
Ddx56Q9D0R4 Gm22963-201ENSMUST00000157960 91 ntBASIC1.53□□□□□ -2.16
Ddx56Q9D0R4 Gm23221-201ENSMUST00000158118 93 ntBASIC1.53□□□□□ -2.16
Ddx56Q9D0R4 Gm22944-201ENSMUST00000158662 133 ntBASIC1.53□□□□□ -2.16
Ddx56Q9D0R4 Gm44483-201ENSMUST00000197203 97 ntBASIC1.53□□□□□ -2.16
Ddx56Q9D0R4 Gm42988-201ENSMUST00000198116 225 ntBASIC1.53□□□□□ -2.16
Ddx56Q9D0R4 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ddx56Q9D0R4 Mir467g-201ENSMUST00000116906 120 ntBASIC1.52□□□□□ -2.17
Ddx56Q9D0R4 Gm22233-201ENSMUST00000157464 114 ntBASIC1.52□□□□□ -2.17
Ddx56Q9D0R4 Gm25868-201ENSMUST00000158253 114 ntBASIC1.52□□□□□ -2.17
Ddx56Q9D0R4 Gm25011-201ENSMUST00000158398 126 ntBASIC1.52□□□□□ -2.17
Ddx56Q9D0R4 Gm22663-201ENSMUST00000158721 102 ntBASIC1.52□□□□□ -2.17
Ddx56Q9D0R4 Gm25241-201ENSMUST00000174909 84 ntBASIC1.52□□□□□ -2.17
Ddx56Q9D0R4 Gm26217-201ENSMUST00000175212 84 ntBASIC1.52□□□□□ -2.17
Ddx56Q9D0R4 Mir7118-201ENSMUST00000197760 61 ntBASIC1.52□□□□□ -2.17
Ddx56Q9D0R4 Gm25410-201ENSMUST00000083758 137 ntBASIC1.52□□□□□ -2.17
Ddx56Q9D0R4 Gm24271-201ENSMUST00000102327 111 ntBASIC1.51□□□□□ -2.17
Ddx56Q9D0R4 Gm22612-201ENSMUST00000158293 101 ntBASIC1.51□□□□□ -2.17
Ddx56Q9D0R4 Gm23375-201ENSMUST00000175407 83 ntBASIC1.51□□□□□ -2.17
Ddx56Q9D0R4 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Ddx56Q9D0R4 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.51□□□□□ -2.17
Ddx56Q9D0R4 Mir324-201ENSMUST00000083600 89 ntBASIC1.51□□□□□ -2.17
Ddx56Q9D0R4 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ddx56Q9D0R4 Gm24895-201ENSMUST00000122742 74 ntBASIC1.5□□□□□ -2.17
Ddx56Q9D0R4 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.5□□□□□ -2.17
Ddx56Q9D0R4 Gm25769-201ENSMUST00000158569 127 ntBASIC1.5□□□□□ -2.17
Ddx56Q9D0R4 Gm25044-201ENSMUST00000158603 104 ntBASIC1.5□□□□□ -2.17
Ddx56Q9D0R4 Gm25958-201ENSMUST00000175114 71 ntBASIC1.5□□□□□ -2.17
Ddx56Q9D0R4 Mir7225-201ENSMUST00000184178 54 ntBASIC1.5□□□□□ -2.17
Ddx56Q9D0R4 Gm5002-201ENSMUST00000207145 223 ntBASIC1.5□□□□□ -2.17
Ddx56Q9D0R4 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Ddx56Q9D0R4 Gm14882-201ENSMUST00000117216 218 ntBASIC1.49□□□□□ -2.17
Ddx56Q9D0R4 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.49□□□□□ -2.17
Ddx56Q9D0R4 Gm23080-201ENSMUST00000157846 103 ntBASIC1.49□□□□□ -2.17
Ddx56Q9D0R4 Gm22973-201ENSMUST00000083298 191 ntBASIC1.49□□□□□ -2.17
Ddx56Q9D0R4 Gm23772-201ENSMUST00000104433 102 ntBASIC1.48□□□□□ -2.17
Ddx56Q9D0R4 Gm23670-201ENSMUST00000157469 119 ntBASIC1.48□□□□□ -2.17
Ddx56Q9D0R4 Gm44976-201ENSMUST00000205543 261 ntBASIC1.48□□□□□ -2.17
Ddx56Q9D0R4 Gm25588-201ENSMUST00000082501 140 ntBASIC1.48□□□□□ -2.17
Ddx56Q9D0R4 Gm26326-201ENSMUST00000083070 129 ntBASIC1.48□□□□□ -2.17
Ddx56Q9D0R4 Mir489-201ENSMUST00000093599 107 ntBASIC1.48□□□□□ -2.17
Ddx56Q9D0R4 Gm12309-201ENSMUST00000119889 182 ntBASIC1.47□□□□□ -2.17
Ddx56Q9D0R4 Gm22815-201ENSMUST00000157451 62 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 305.1 ms