Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm28579-201ENSMUST00000186143 369 ntBASIC0.56□□□□□ -2.32
Ccdc43Q9CR29 Gm7240-201ENSMUST00000220769 664 ntBASIC0.56□□□□□ -2.32
Ccdc43Q9CR29 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.55□□□□□ -2.32
Ccdc43Q9CR29 Gm23375-201ENSMUST00000175407 83 ntBASIC0.55□□□□□ -2.32
Ccdc43Q9CR29 Mir6389-201ENSMUST00000183661 102 ntBASIC0.55□□□□□ -2.32
Ccdc43Q9CR29 Gm43432-201ENSMUST00000196352 121 ntBASIC0.55□□□□□ -2.32
Ccdc43Q9CR29 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 Gm22003-201ENSMUST00000101885 107 ntBASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 Gm12797-201ENSMUST00000118645 273 ntBASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 Gm17919-201ENSMUST00000173344 312 ntBASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 Gm23410-201ENSMUST00000179967 107 ntBASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 Gm22756-201ENSMUST00000180118 107 ntBASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 Gm8219-201ENSMUST00000218309 242 ntBASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 Gm24527-201ENSMUST00000082920 107 ntBASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 Gm22505-201ENSMUST00000082956 108 ntBASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 Gm22363-201ENSMUST00000083100 108 ntBASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 Gm23814-201ENSMUST00000083230 102 ntBASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 Gm23095-201ENSMUST00000083446 107 ntBASIC0.54□□□□□ -2.32
Ccdc43Q9CR29 Mir547-201ENSMUST00000102051 78 ntBASIC0.53□□□□□ -2.32
Ccdc43Q9CR29 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.53□□□□□ -2.32
Ccdc43Q9CR29 Mir448-201ENSMUST00000083516 112 ntBASIC0.53□□□□□ -2.32
Ccdc43Q9CR29 Mir10b-201ENSMUST00000083566 68 ntBASIC0.53□□□□□ -2.32
Ccdc43Q9CR29 Gm13797-201ENSMUST00000121792 120 ntBASIC0.52□□□□□ -2.33
Ccdc43Q9CR29 Gm23605-201ENSMUST00000157255 127 ntBASIC0.52□□□□□ -2.33
Ccdc43Q9CR29 Gm28016-201ENSMUST00000184594 196 ntBASIC0.52□□□□□ -2.33
Ccdc43Q9CR29 Gm44055-201ENSMUST00000204376 247 ntBASIC0.52□□□□□ -2.33
Ccdc43Q9CR29 Gm22571-201ENSMUST00000082984 70 ntBASIC0.52□□□□□ -2.33
Ccdc43Q9CR29 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Ccdc43Q9CR29 Gm24423-201ENSMUST00000101982 106 ntBASIC0.51□□□□□ -2.33
Ccdc43Q9CR29 Gm11904-201ENSMUST00000120562 248 ntBASIC0.51□□□□□ -2.33
Ccdc43Q9CR29 Gm6985-201ENSMUST00000121255 271 ntBASIC0.51□□□□□ -2.33
Ccdc43Q9CR29 Gm6272-201ENSMUST00000121256 171 ntBASIC0.51□□□□□ -2.33
Ccdc43Q9CR29 Gm23219-201ENSMUST00000158123 87 ntBASIC0.51□□□□□ -2.33
Ccdc43Q9CR29 Mir6394-201ENSMUST00000184738 99 ntBASIC0.51□□□□□ -2.33
Ccdc43Q9CR29 Gm29107-201ENSMUST00000190910 347 ntBASIC0.51□□□□□ -2.33
Ccdc43Q9CR29 Gm42506-201ENSMUST00000202009 150 ntBASIC0.51□□□□□ -2.33
Ccdc43Q9CR29 Gm44211-201ENSMUST00000204867 145 ntBASIC0.51□□□□□ -2.33
Ccdc43Q9CR29 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.51□□□□□ -2.33
Ccdc43Q9CR29 Gm25634-201ENSMUST00000082667 105 ntBASIC0.51□□□□□ -2.33
Ccdc43Q9CR29 Mir30a-201ENSMUST00000083471 71 ntBASIC0.51□□□□□ -2.33
Ccdc43Q9CR29 Gm13922-201ENSMUST00000119505 156 ntBASIC0.5□□□□□ -2.33
Ccdc43Q9CR29 Gm25882-201ENSMUST00000157784 85 ntBASIC0.5□□□□□ -2.33
Ccdc43Q9CR29 Gm23416-201ENSMUST00000175520 95 ntBASIC0.5□□□□□ -2.33
Ccdc43Q9CR29 Gm25235-201ENSMUST00000179933 107 ntBASIC0.5□□□□□ -2.33
Ccdc43Q9CR29 Gm44458-201ENSMUST00000196594 143 ntBASIC0.5□□□□□ -2.33
Ccdc43Q9CR29 Gm44464-201ENSMUST00000198010 138 ntBASIC0.5□□□□□ -2.33
Ccdc43Q9CR29 Gm14884-201ENSMUST00000120456 196 ntBASIC0.49□□□□□ -2.33
Ccdc43Q9CR29 Gm23655-201ENSMUST00000122627 105 ntBASIC0.49□□□□□ -2.33
Ccdc43Q9CR29 Gm24635-201ENSMUST00000122712 128 ntBASIC0.49□□□□□ -2.33
Ccdc43Q9CR29 Gm44308-201ENSMUST00000197080 99 ntBASIC0.49□□□□□ -2.33
Ccdc43Q9CR29 Gm44977-201ENSMUST00000205283 420 ntBASIC0.49□□□□□ -2.33
Ccdc43Q9CR29 Gm24258-201ENSMUST00000083739 133 ntBASIC0.49□□□□□ -2.33
Ccdc43Q9CR29 Gm22051-201ENSMUST00000117002 127 ntBASIC0.48□□□□□ -2.33
Ccdc43Q9CR29 Gm24559-201ENSMUST00000157519 121 ntBASIC0.48□□□□□ -2.33
Ccdc43Q9CR29 Gm24963-201ENSMUST00000157916 144 ntBASIC0.48□□□□□ -2.33
Ccdc43Q9CR29 Gm24547-201ENSMUST00000158649 149 ntBASIC0.48□□□□□ -2.33
Ccdc43Q9CR29 Gm23008-201ENSMUST00000158946 80 ntBASIC0.48□□□□□ -2.33
Ccdc43Q9CR29 Gm25512-201ENSMUST00000083863 107 ntBASIC0.48□□□□□ -2.33
Ccdc43Q9CR29 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Ccdc43Q9CR29 Gm25110-201ENSMUST00000116684 121 ntBASIC0.47□□□□□ -2.33
Ccdc43Q9CR29 Gm25775-201ENSMUST00000116716 121 ntBASIC0.47□□□□□ -2.33
Ccdc43Q9CR29 Gm24795-201ENSMUST00000116737 121 ntBASIC0.47□□□□□ -2.33
Ccdc43Q9CR29 Gm25171-201ENSMUST00000116926 121 ntBASIC0.47□□□□□ -2.33
Ccdc43Q9CR29 Gm23991-201ENSMUST00000117033 93 ntBASIC0.47□□□□□ -2.33
Ccdc43Q9CR29 Gm22479-201ENSMUST00000122566 81 ntBASIC0.47□□□□□ -2.33
Ccdc43Q9CR29 Gm25393-201ENSMUST00000157336 285 ntBASIC0.47□□□□□ -2.33
Ccdc43Q9CR29 Mir6985-201ENSMUST00000184641 61 ntBASIC0.47□□□□□ -2.33
Ccdc43Q9CR29 Gm27747-201ENSMUST00000184707 85 ntBASIC0.47□□□□□ -2.33
Ccdc43Q9CR29 Gm24764-201ENSMUST00000083686 199 ntBASIC0.47□□□□□ -2.33
Ccdc43Q9CR29 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Ccdc43Q9CR29 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.46□□□□□ -2.34
Ccdc43Q9CR29 Gm22216-201ENSMUST00000157557 114 ntBASIC0.46□□□□□ -2.34
Ccdc43Q9CR29 Gm22767-201ENSMUST00000158365 165 ntBASIC0.46□□□□□ -2.34
Ccdc43Q9CR29 Mir669k-201ENSMUST00000177742 127 ntBASIC0.46□□□□□ -2.34
Ccdc43Q9CR29 Gm25673-201ENSMUST00000179957 127 ntBASIC0.46□□□□□ -2.34
Ccdc43Q9CR29 Gm22469-201ENSMUST00000104118 133 ntBASIC0.45□□□□□ -2.34
Ccdc43Q9CR29 Gm23763-201ENSMUST00000158345 60 ntBASIC0.45□□□□□ -2.34
Ccdc43Q9CR29 Gm26402-201ENSMUST00000158499 113 ntBASIC0.45□□□□□ -2.34
Ccdc43Q9CR29 Gm25241-201ENSMUST00000174909 84 ntBASIC0.45□□□□□ -2.34
Ccdc43Q9CR29 Gm26217-201ENSMUST00000175212 84 ntBASIC0.45□□□□□ -2.34
Ccdc43Q9CR29 Gm22887-201ENSMUST00000178586 107 ntBASIC0.45□□□□□ -2.34
Ccdc43Q9CR29 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.45□□□□□ -2.34
Ccdc43Q9CR29 Mir6377-201ENSMUST00000183760 114 ntBASIC0.45□□□□□ -2.34
Ccdc43Q9CR29 Gm22686-201ENSMUST00000082847 100 ntBASIC0.45□□□□□ -2.34
Ccdc43Q9CR29 Gm26326-201ENSMUST00000083070 129 ntBASIC0.45□□□□□ -2.34
Ccdc43Q9CR29 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.45□□□□□ -2.34
Ccdc43Q9CR29 Gm22759-201ENSMUST00000102276 96 ntBASIC0.44□□□□□ -2.34
Ccdc43Q9CR29 Gm25111-201ENSMUST00000116686 147 ntBASIC0.44□□□□□ -2.34
Ccdc43Q9CR29 Gm11248-201ENSMUST00000119568 201 ntBASIC0.44□□□□□ -2.34
Ccdc43Q9CR29 Gm25323-201ENSMUST00000122555 103 ntBASIC0.44□□□□□ -2.34
Ccdc43Q9CR29 Gm23672-201ENSMUST00000157471 107 ntBASIC0.44□□□□□ -2.34
Ccdc43Q9CR29 Gm24006-201ENSMUST00000158462 132 ntBASIC0.44□□□□□ -2.34
Ccdc43Q9CR29 Gm44462-201ENSMUST00000199696 129 ntBASIC0.44□□□□□ -2.34
Ccdc43Q9CR29 Gm25814-201ENSMUST00000082754 107 ntBASIC0.44□□□□□ -2.34
Ccdc43Q9CR29 Gm11204-201ENSMUST00000122438 147 ntBASIC0.43□□□□□ -2.34
Ccdc43Q9CR29 Gm23214-201ENSMUST00000122716 157 ntBASIC0.43□□□□□ -2.34
Ccdc43Q9CR29 Gm25828-201ENSMUST00000157087 95 ntBASIC0.43□□□□□ -2.34
Ccdc43Q9CR29 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Ccdc43Q9CR29 Snord69-201ENSMUST00000104024 80 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 161.9 ms