Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm24238-201ENSMUST00000157792 98 ntBASIC2.86□□□□□ -1.95
Trim11Q99PQ2 Rnu7-201ENSMUST00000158458 62 ntBASIC2.86□□□□□ -1.95
Trim11Q99PQ2 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.86□□□□□ -1.95
Trim11Q99PQ2 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.86□□□□□ -1.95
Trim11Q99PQ2 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.85□□□□□ -1.95
Trim11Q99PQ2 Gm23838-201ENSMUST00000158067 162 ntBASIC2.85□□□□□ -1.95
Trim11Q99PQ2 Gm27505-201ENSMUST00000185071 110 ntBASIC2.85□□□□□ -1.95
Trim11Q99PQ2 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.85□□□□□ -1.95
Trim11Q99PQ2 Gm44555-201ENSMUST00000209008 148 ntBASIC2.85□□□□□ -1.95
Trim11Q99PQ2 Gm45544-201ENSMUST00000211130 88 ntBASIC2.85□□□□□ -1.95
Trim11Q99PQ2 Gm22249-201ENSMUST00000082485 136 ntBASIC2.85□□□□□ -1.95
Trim11Q99PQ2 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.85□□□□□ -1.95
Trim11Q99PQ2 Gm24536-201ENSMUST00000083144 107 ntBASIC2.85□□□□□ -1.95
Trim11Q99PQ2 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Trim11Q99PQ2 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
Trim11Q99PQ2 Mir293-201ENSMUST00000104841 80 ntBASIC2.84□□□□□ -1.95
Trim11Q99PQ2 Gm23090-201ENSMUST00000177331 78 ntBASIC2.84□□□□□ -1.95
Trim11Q99PQ2 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.84□□□□□ -1.95
Trim11Q99PQ2 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trim11Q99PQ2 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.83□□□□□ -1.96
Trim11Q99PQ2 Gm24958-201ENSMUST00000158009 97 ntBASIC2.83□□□□□ -1.96
Trim11Q99PQ2 Gm25373-201ENSMUST00000158156 115 ntBASIC2.83□□□□□ -1.96
Trim11Q99PQ2 Mir7013-201ENSMUST00000183540 72 ntBASIC2.83□□□□□ -1.96
Trim11Q99PQ2 Gm45268-201ENSMUST00000210046 370 ntBASIC2.83□□□□□ -1.96
Trim11Q99PQ2 Gm45522-201ENSMUST00000210784 166 ntBASIC2.83□□□□□ -1.96
Trim11Q99PQ2 Snord104-201ENSMUST00000083192 70 ntBASIC2.83□□□□□ -1.96
Trim11Q99PQ2 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim11Q99PQ2 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trim11Q99PQ2 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.83□□□□□ -1.96
Trim11Q99PQ2 Mir682-201ENSMUST00000102281 96 ntBASIC2.82□□□□□ -1.96
Trim11Q99PQ2 Gm25485-201ENSMUST00000104120 132 ntBASIC2.82□□□□□ -1.96
Trim11Q99PQ2 Mir669d-201ENSMUST00000104644 121 ntBASIC2.82□□□□□ -1.96
Trim11Q99PQ2 Gm25370-201ENSMUST00000158159 94 ntBASIC2.82□□□□□ -1.96
Trim11Q99PQ2 Gm24801-201ENSMUST00000178503 105 ntBASIC2.82□□□□□ -1.96
Trim11Q99PQ2 Gm27991-201ENSMUST00000184804 137 ntBASIC2.82□□□□□ -1.96
Trim11Q99PQ2 Mir411-201ENSMUST00000083543 82 ntBASIC2.82□□□□□ -1.96
Trim11Q99PQ2 Snora33-201ENSMUST00000093556 129 ntBASIC2.82□□□□□ -1.96
Trim11Q99PQ2 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.82□□□□□ -1.96
Trim11Q99PQ2 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trim11Q99PQ2 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.82□□□□□ -1.96
Trim11Q99PQ2 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.81□□□□□ -1.96
Trim11Q99PQ2 Gm22672-201ENSMUST00000104414 134 ntBASIC2.81□□□□□ -1.96
Trim11Q99PQ2 Mir466k-201ENSMUST00000116774 122 ntBASIC2.81□□□□□ -1.96
Trim11Q99PQ2 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.81□□□□□ -1.96
Trim11Q99PQ2 Gm24212-201ENSMUST00000158258 132 ntBASIC2.81□□□□□ -1.96
Trim11Q99PQ2 Gm8031-201ENSMUST00000213430 626 ntBASIC2.81□□□□□ -1.96
Trim11Q99PQ2 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.81□□□□□ -1.96
Trim11Q99PQ2 Gm23293-201ENSMUST00000082552 104 ntBASIC2.81□□□□□ -1.96
Trim11Q99PQ2 Snord118-201ENSMUST00000082965 135 ntBASIC2.81□□□□□ -1.96
Trim11Q99PQ2 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.81□□□□□ -1.96
Trim11Q99PQ2 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.81□□□□□ -1.96
Trim11Q99PQ2 Gm16021-201ENSMUST00000121176 219 ntBASIC2.8□□□□□ -1.96
Trim11Q99PQ2 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trim11Q99PQ2 Gm25153-201ENSMUST00000157118 156 ntBASIC2.8□□□□□ -1.96
Trim11Q99PQ2 Gm23980-201ENSMUST00000157135 158 ntBASIC2.8□□□□□ -1.96
Trim11Q99PQ2 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.8□□□□□ -1.96
Trim11Q99PQ2 Mir7215-201ENSMUST00000200383 51 ntBASIC2.8□□□□□ -1.96
Trim11Q99PQ2 Gm45452-201ENSMUST00000210905 177 ntBASIC2.8□□□□□ -1.96
Trim11Q99PQ2 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.8□□□□□ -1.96
Trim11Q99PQ2 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trim11Q99PQ2 Gm24670-201ENSMUST00000104154 132 ntBASIC2.79□□□□□ -1.96
Trim11Q99PQ2 Gm24982-201ENSMUST00000104456 132 ntBASIC2.79□□□□□ -1.96
Trim11Q99PQ2 Gm23351-201ENSMUST00000158427 125 ntBASIC2.79□□□□□ -1.96
Trim11Q99PQ2 Gm3852-201ENSMUST00000182781 264 ntBASIC2.79□□□□□ -1.96
Trim11Q99PQ2 Gm26441-201ENSMUST00000082590 104 ntBASIC2.79□□□□□ -1.96
Trim11Q99PQ2 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.79□□□□□ -1.96
Trim11Q99PQ2 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.79□□□□□ -1.96
Trim11Q99PQ2 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trim11Q99PQ2 Gm25884-201ENSMUST00000157782 62 ntBASIC2.78□□□□□ -1.96
Trim11Q99PQ2 Gm24771-201ENSMUST00000158508 137 ntBASIC2.78□□□□□ -1.96
Trim11Q99PQ2 Gm22622-201ENSMUST00000082870 129 ntBASIC2.78□□□□□ -1.96
Trim11Q99PQ2 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trim11Q99PQ2 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.77□□□□□ -1.97
Trim11Q99PQ2 Gm23033-201ENSMUST00000157996 134 ntBASIC2.77□□□□□ -1.97
Trim11Q99PQ2 Gm22535-201ENSMUST00000158174 119 ntBASIC2.77□□□□□ -1.97
Trim11Q99PQ2 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trim11Q99PQ2 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.77□□□□□ -1.97
Trim11Q99PQ2 Gm20108-201ENSMUST00000219977 153 ntBASIC2.77□□□□□ -1.97
Trim11Q99PQ2 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.77□□□□□ -1.97
Trim11Q99PQ2 Gm25337-201ENSMUST00000083723 104 ntBASIC2.77□□□□□ -1.97
Trim11Q99PQ2 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trim11Q99PQ2 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trim11Q99PQ2 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trim11Q99PQ2 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.76□□□□□ -1.97
Trim11Q99PQ2 Gm26247-201ENSMUST00000116702 91 ntBASIC2.76□□□□□ -1.97
Trim11Q99PQ2 Gm13433-201ENSMUST00000121701 240 ntBASIC2.76□□□□□ -1.97
Trim11Q99PQ2 Gm25371-201ENSMUST00000158162 101 ntBASIC2.76□□□□□ -1.97
Trim11Q99PQ2 Gm24345-201ENSMUST00000158706 124 ntBASIC2.76□□□□□ -1.97
Trim11Q99PQ2 Mir6376-201ENSMUST00000185149 131 ntBASIC2.76□□□□□ -1.97
Trim11Q99PQ2 Gm44393-201ENSMUST00000197418 138 ntBASIC2.76□□□□□ -1.97
Trim11Q99PQ2 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.76□□□□□ -1.97
Trim11Q99PQ2 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.76□□□□□ -1.97
Trim11Q99PQ2 Gm24038-201ENSMUST00000082872 159 ntBASIC2.76□□□□□ -1.97
Trim11Q99PQ2 Snord80-201ENSMUST00000083801 81 ntBASIC2.76□□□□□ -1.97
Trim11Q99PQ2 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.76□□□□□ -1.97
Trim11Q99PQ2 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Trim11Q99PQ2 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trim11Q99PQ2 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trim11Q99PQ2 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Trim11Q99PQ2 Gm25061-201ENSMUST00000104665 107 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms