Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm24449-201ENSMUST00000083985 106 ntBASIC1.84□□□□□ -2.11
Pcdha3Q91Y16 Gm25878-201ENSMUST00000104327 93 ntBASIC1.83□□□□□ -2.12
Pcdha3Q91Y16 Gm24572-201ENSMUST00000175505 88 ntBASIC1.83□□□□□ -2.12
Pcdha3Q91Y16 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.83□□□□□ -2.12
Pcdha3Q91Y16 Gm25797-201ENSMUST00000082640 107 ntBASIC1.83□□□□□ -2.12
Pcdha3Q91Y16 Snora3-201ENSMUST00000083082 132 ntBASIC1.83□□□□□ -2.12
Pcdha3Q91Y16 Gm23138-201ENSMUST00000083365 103 ntBASIC1.83□□□□□ -2.12
Pcdha3Q91Y16 Gm25409-201ENSMUST00000083764 131 ntBASIC1.83□□□□□ -2.12
Pcdha3Q91Y16 Gm22681-201ENSMUST00000083853 106 ntBASIC1.83□□□□□ -2.12
Pcdha3Q91Y16 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.82□□□□□ -2.12
Pcdha3Q91Y16 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Pcdha3Q91Y16 Gm24586-201ENSMUST00000116695 89 ntBASIC1.82□□□□□ -2.12
Pcdha3Q91Y16 Gm15067-201ENSMUST00000119534 156 ntBASIC1.82□□□□□ -2.12
Pcdha3Q91Y16 Gm11644-201ENSMUST00000119735 150 ntBASIC1.82□□□□□ -2.12
Pcdha3Q91Y16 Gm14671-201ENSMUST00000121790 262 ntBASIC1.82□□□□□ -2.12
Pcdha3Q91Y16 Gm27511-201ENSMUST00000183502 127 ntBASIC1.82□□□□□ -2.12
Pcdha3Q91Y16 Gm43602-201ENSMUST00000196772 300 ntBASIC1.82□□□□□ -2.12
Pcdha3Q91Y16 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.82□□□□□ -2.12
Pcdha3Q91Y16 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.81□□□□□ -2.12
Pcdha3Q91Y16 Gm22603-201ENSMUST00000157603 96 ntBASIC1.81□□□□□ -2.12
Pcdha3Q91Y16 Gm26415-201ENSMUST00000157673 292 ntBASIC1.81□□□□□ -2.12
Pcdha3Q91Y16 Gm24747-201ENSMUST00000157835 87 ntBASIC1.81□□□□□ -2.12
Pcdha3Q91Y16 Mir7679-201ENSMUST00000183379 63 ntBASIC1.81□□□□□ -2.12
Pcdha3Q91Y16 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.81□□□□□ -2.12
Pcdha3Q91Y16 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.81□□□□□ -2.12
Pcdha3Q91Y16 Gm23303-201ENSMUST00000082714 152 ntBASIC1.81□□□□□ -2.12
Pcdha3Q91Y16 Gm23445-201ENSMUST00000082800 107 ntBASIC1.81□□□□□ -2.12
Pcdha3Q91Y16 Mir489-201ENSMUST00000093599 107 ntBASIC1.81□□□□□ -2.12
Pcdha3Q91Y16 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Pcdha3Q91Y16 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.81□□□□□ -2.12
Pcdha3Q91Y16 Gm23010-201ENSMUST00000104151 126 ntBASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 Gm14626-201ENSMUST00000117619 216 ntBASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 Gm14502-201ENSMUST00000118154 113 ntBASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 Gm23048-201ENSMUST00000157237 129 ntBASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 Gm23044-201ENSMUST00000157891 100 ntBASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 Gm22387-201ENSMUST00000158191 131 ntBASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 Gm45754-201ENSMUST00000212380 279 ntBASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 Gm24805-201ENSMUST00000082931 104 ntBASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 Mir490-201ENSMUST00000093567 84 ntBASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Pcdha3Q91Y16 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Gm26011-201ENSMUST00000104410 104 ntBASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Gm22228-201ENSMUST00000157364 101 ntBASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Gm25060-201ENSMUST00000157374 130 ntBASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Gm22386-201ENSMUST00000158192 129 ntBASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Gm25771-201ENSMUST00000158565 144 ntBASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Gm26004-201ENSMUST00000158804 116 ntBASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Gm25364-201ENSMUST00000158851 107 ntBASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Gm23504-201ENSMUST00000158988 95 ntBASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Gm25730-201ENSMUST00000178753 165 ntBASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Mir6419-201ENSMUST00000184784 113 ntBASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Gm45544-201ENSMUST00000211130 88 ntBASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.79□□□□□ -2.12
Pcdha3Q91Y16 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Pcdha3Q91Y16 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Pcdha3Q91Y16 Gm14674-201ENSMUST00000117816 342 ntBASIC1.78□□□□□ -2.12
Pcdha3Q91Y16 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.78□□□□□ -2.12
Pcdha3Q91Y16 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.78□□□□□ -2.12
Pcdha3Q91Y16 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.78□□□□□ -2.12
Pcdha3Q91Y16 Gm24616-201ENSMUST00000083274 139 ntBASIC1.78□□□□□ -2.12
Pcdha3Q91Y16 Gm22743-201ENSMUST00000083445 133 ntBASIC1.78□□□□□ -2.12
Pcdha3Q91Y16 Gm23100-201ENSMUST00000083455 141 ntBASIC1.78□□□□□ -2.12
Pcdha3Q91Y16 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.78□□□□□ -2.12
Pcdha3Q91Y16 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.78□□□□□ -2.12
Pcdha3Q91Y16 Gm22828-201ENSMUST00000083768 107 ntBASIC1.78□□□□□ -2.12
Pcdha3Q91Y16 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Pcdha3Q91Y16 Mir223-201ENSMUST00000102112 110 ntBASIC1.77□□□□□ -2.13
Pcdha3Q91Y16 Gm22545-201ENSMUST00000104350 132 ntBASIC1.77□□□□□ -2.13
Pcdha3Q91Y16 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.77□□□□□ -2.13
Pcdha3Q91Y16 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.77□□□□□ -2.13
Pcdha3Q91Y16 Gm24394-201ENSMUST00000158141 123 ntBASIC1.77□□□□□ -2.13
Pcdha3Q91Y16 Gm22665-201ENSMUST00000158720 275 ntBASIC1.77□□□□□ -2.13
Pcdha3Q91Y16 Gm25035-201ENSMUST00000175414 77 ntBASIC1.77□□□□□ -2.13
Pcdha3Q91Y16 Gm43898-201ENSMUST00000204456 424 ntBASIC1.77□□□□□ -2.13
Pcdha3Q91Y16 Gm22283-201ENSMUST00000082556 161 ntBASIC1.77□□□□□ -2.13
Pcdha3Q91Y16 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Pcdha3Q91Y16 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Pcdha3Q91Y16 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Pcdha3Q91Y16 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Pcdha3Q91Y16 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.76□□□□□ -2.13
Pcdha3Q91Y16 Gm23670-201ENSMUST00000157469 119 ntBASIC1.76□□□□□ -2.13
Pcdha3Q91Y16 Gm24345-201ENSMUST00000158706 124 ntBASIC1.76□□□□□ -2.13
Pcdha3Q91Y16 Mir3057-201ENSMUST00000175040 91 ntBASIC1.76□□□□□ -2.13
Pcdha3Q91Y16 Gm26326-201ENSMUST00000083070 129 ntBASIC1.76□□□□□ -2.13
Pcdha3Q91Y16 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Pcdha3Q91Y16 Gm25279-201ENSMUST00000122608 133 ntBASIC1.75□□□□□ -2.13
Pcdha3Q91Y16 Gm24000-201ENSMUST00000158063 89 ntBASIC1.75□□□□□ -2.13
Pcdha3Q91Y16 Gm23859-201ENSMUST00000158383 64 ntBASIC1.75□□□□□ -2.13
Pcdha3Q91Y16 Gm22888-201ENSMUST00000158640 77 ntBASIC1.75□□□□□ -2.13
Pcdha3Q91Y16 Gm27792-201ENSMUST00000184031 115 ntBASIC1.75□□□□□ -2.13
Pcdha3Q91Y16 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.75□□□□□ -2.13
Pcdha3Q91Y16 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC1.75□□□□□ -2.13
Pcdha3Q91Y16 Gm22576-201ENSMUST00000083733 104 ntBASIC1.75□□□□□ -2.13
Pcdha3Q91Y16 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Pcdha3Q91Y16 Mir873a-201ENSMUST00000104863 77 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 1280.5 ms