Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 AC116589.3-202ENSMUST00000221770 649 ntBASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 AC116589.6-201ENSMUST00000222252 649 ntBASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 Gm23625-201ENSMUST00000082457 100 ntBASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 Mir377-201ENSMUST00000083504 68 ntBASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 Mir532-201ENSMUST00000093630 96 ntBASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.5□□□□□ -2.49
Nup35Q8R4R6 Gm23708-201ENSMUST00000104367 123 ntBASIC-0.51□□□□□ -2.49
Nup35Q8R4R6 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.51□□□□□ -2.49
Nup35Q8R4R6 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.51□□□□□ -2.49
Nup35Q8R4R6 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.51□□□□□ -2.49
Nup35Q8R4R6 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.51□□□□□ -2.49
Nup35Q8R4R6 Gm23191-201ENSMUST00000179147 107 ntBASIC-0.51□□□□□ -2.49
Nup35Q8R4R6 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.51□□□□□ -2.49
Nup35Q8R4R6 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.51□□□□□ -2.49
Nup35Q8R4R6 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.51□□□□□ -2.49
Nup35Q8R4R6 Gm26329-201ENSMUST00000093723 110 ntBASIC-0.51□□□□□ -2.49
Nup35Q8R4R6 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-0.52□□□□□ -2.49
Nup35Q8R4R6 Gm13059-201ENSMUST00000119881 398 ntBASIC-0.52□□□□□ -2.49
Nup35Q8R4R6 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.52□□□□□ -2.49
Nup35Q8R4R6 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.52□□□□□ -2.49
Nup35Q8R4R6 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.52□□□□□ -2.49
Nup35Q8R4R6 AC153541.1-201ENSMUST00000213786 294 ntBASIC-0.52□□□□□ -2.49
Nup35Q8R4R6 AC102369.1-201ENSMUST00000218415 373 ntBASIC-0.52□□□□□ -2.49
Nup35Q8R4R6 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.53□□□□□ -2.49
Nup35Q8R4R6 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.53□□□□□ -2.49
Nup35Q8R4R6 Gm23536-201ENSMUST00000157541 134 ntBASIC-0.53□□□□□ -2.49
Nup35Q8R4R6 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.53□□□□□ -2.49
Nup35Q8R4R6 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.53□□□□□ -2.49
Nup35Q8R4R6 Gm27919-201ENSMUST00000185163 107 ntBASIC-0.53□□□□□ -2.49
Nup35Q8R4R6 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.53□□□□□ -2.49
Nup35Q8R4R6 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
Nup35Q8R4R6 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.54□□□□□ -2.5
Nup35Q8R4R6 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.54□□□□□ -2.5
Nup35Q8R4R6 Gm12785-201ENSMUST00000122052 172 ntBASIC-0.54□□□□□ -2.5
Nup35Q8R4R6 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.54□□□□□ -2.5
Nup35Q8R4R6 Mir376a-201ENSMUST00000197584 68 ntBASIC-0.54□□□□□ -2.5
Nup35Q8R4R6 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.54□□□□□ -2.5
Nup35Q8R4R6 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.54□□□□□ -2.5
Nup35Q8R4R6 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.54□□□□□ -2.5
Nup35Q8R4R6 Mir496a-201ENSMUST00000093627 79 ntBASIC-0.54□□□□□ -2.5
Nup35Q8R4R6 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.55□□□□□ -2.5
Nup35Q8R4R6 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.55□□□□□ -2.5
Nup35Q8R4R6 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.55□□□□□ -2.5
Nup35Q8R4R6 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.55□□□□□ -2.5
Nup35Q8R4R6 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.55□□□□□ -2.5
Nup35Q8R4R6 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.55□□□□□ -2.5
Nup35Q8R4R6 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.55□□□□□ -2.5
Nup35Q8R4R6 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.55□□□□□ -2.5
Nup35Q8R4R6 Gm26107-201ENSMUST00000083972 107 ntBASIC-0.55□□□□□ -2.5
Nup35Q8R4R6 Gm24438-201ENSMUST00000157893 115 ntBASIC-0.56□□□□□ -2.5
Nup35Q8R4R6 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.56□□□□□ -2.5
Nup35Q8R4R6 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.56□□□□□ -2.5
Nup35Q8R4R6 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.56□□□□□ -2.5
Nup35Q8R4R6 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.56□□□□□ -2.5
Nup35Q8R4R6 Mir465d-201ENSMUST00000196314 58 ntBASIC-0.56□□□□□ -2.5
Nup35Q8R4R6 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.56□□□□□ -2.5
Nup35Q8R4R6 AC154484.1-201ENSMUST00000227311 771 ntBASIC-0.56□□□□□ -2.5
Nup35Q8R4R6 AC132918.1-201ENSMUST00000227877 925 ntBASIC-0.56□□□□□ -2.5
Nup35Q8R4R6 Gm24037-201ENSMUST00000082871 180 ntBASIC-0.56□□□□□ -2.5
Nup35Q8R4R6 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.56□□□□□ -2.5
Nup35Q8R4R6 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
Nup35Q8R4R6 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.57□□□□□ -2.5
Nup35Q8R4R6 Gm23571-201ENSMUST00000180073 127 ntBASIC-0.57□□□□□ -2.5
Nup35Q8R4R6 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.57□□□□□ -2.5
Nup35Q8R4R6 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.57□□□□□ -2.5
Nup35Q8R4R6 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.57□□□□□ -2.5
Nup35Q8R4R6 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.57□□□□□ -2.5
Nup35Q8R4R6 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.58□□□□□ -2.5
Nup35Q8R4R6 Gm14293-201ENSMUST00000118528 577 ntBASIC-0.58□□□□□ -2.5
Nup35Q8R4R6 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.58□□□□□ -2.5
Nup35Q8R4R6 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.58□□□□□ -2.5
Nup35Q8R4R6 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.58□□□□□ -2.5
Nup35Q8R4R6 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
Nup35Q8R4R6 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
Nup35Q8R4R6 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.58□□□□□ -2.5
Nup35Q8R4R6 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.58□□□□□ -2.5
Nup35Q8R4R6 Gm14574-201ENSMUST00000120644 279 ntBASIC-0.59□□□□□ -2.5
Nup35Q8R4R6 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.59□□□□□ -2.5
Nup35Q8R4R6 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.59□□□□□ -2.5
Nup35Q8R4R6 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.59□□□□□ -2.5
Nup35Q8R4R6 Gm38183-201ENSMUST00000193189 205 ntBASIC-0.59□□□□□ -2.5
Nup35Q8R4R6 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.59□□□□□ -2.5
Nup35Q8R4R6 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.59□□□□□ -2.5
Nup35Q8R4R6 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.59□□□□□ -2.5
Nup35Q8R4R6 Gm11407-201ENSMUST00000120362 1058 ntBASIC-0.6□□□□□ -2.51
Nup35Q8R4R6 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.6□□□□□ -2.51
Nup35Q8R4R6 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.6□□□□□ -2.51
Nup35Q8R4R6 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.6□□□□□ -2.51
Nup35Q8R4R6 Gm23474-201ENSMUST00000158884 75 ntBASIC-0.6□□□□□ -2.51
Nup35Q8R4R6 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.6□□□□□ -2.51
Nup35Q8R4R6 AC166358.7-201ENSMUST00000221132 108 ntBASIC-0.6□□□□□ -2.51
Nup35Q8R4R6 AC125543.5-201ENSMUST00000222799 108 ntBASIC-0.6□□□□□ -2.51
Nup35Q8R4R6 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms