Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm24808-201ENSMUST00000157993 118 ntBASIC1.19□□□□□ -2.22
Nup88Q8CEC0 Gm24221-201ENSMUST00000158833 313 ntBASIC1.19□□□□□ -2.22
Nup88Q8CEC0 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.19□□□□□ -2.22
Nup88Q8CEC0 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Nup88Q8CEC0 Gm22686-201ENSMUST00000082847 100 ntBASIC1.19□□□□□ -2.22
Nup88Q8CEC0 Gm22704-201ENSMUST00000083027 137 ntBASIC1.19□□□□□ -2.22
Nup88Q8CEC0 Mir384-201ENSMUST00000083565 88 ntBASIC1.19□□□□□ -2.22
Nup88Q8CEC0 Mir22-201ENSMUST00000083595 95 ntBASIC1.19□□□□□ -2.22
Nup88Q8CEC0 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.18□□□□□ -2.22
Nup88Q8CEC0 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.18□□□□□ -2.22
Nup88Q8CEC0 Gm22433-201ENSMUST00000158550 142 ntBASIC1.18□□□□□ -2.22
Nup88Q8CEC0 Gm22914-201ENSMUST00000175195 77 ntBASIC1.18□□□□□ -2.22
Nup88Q8CEC0 Gm27332-201ENSMUST00000184893 112 ntBASIC1.18□□□□□ -2.22
Nup88Q8CEC0 Gm28344-201ENSMUST00000185704 279 ntBASIC1.18□□□□□ -2.22
Nup88Q8CEC0 Gm44396-201ENSMUST00000199843 114 ntBASIC1.18□□□□□ -2.22
Nup88Q8CEC0 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Nup88Q8CEC0 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Nup88Q8CEC0 Gm26293-201ENSMUST00000104170 84 ntBASIC1.17□□□□□ -2.22
Nup88Q8CEC0 Gm25011-201ENSMUST00000158398 126 ntBASIC1.17□□□□□ -2.22
Nup88Q8CEC0 Gm24345-201ENSMUST00000158706 124 ntBASIC1.17□□□□□ -2.22
Nup88Q8CEC0 Gm25949-201ENSMUST00000175333 114 ntBASIC1.17□□□□□ -2.22
Nup88Q8CEC0 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.17□□□□□ -2.22
Nup88Q8CEC0 Gm44989-201ENSMUST00000204749 217 ntBASIC1.17□□□□□ -2.22
Nup88Q8CEC0 Gm23140-201ENSMUST00000082487 107 ntBASIC1.17□□□□□ -2.22
Nup88Q8CEC0 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Nup88Q8CEC0 Gm25878-201ENSMUST00000104327 93 ntBASIC1.16□□□□□ -2.22
Nup88Q8CEC0 Gm6897-201ENSMUST00000117714 138 ntBASIC1.16□□□□□ -2.22
Nup88Q8CEC0 Gm14758-201ENSMUST00000119104 138 ntBASIC1.16□□□□□ -2.22
Nup88Q8CEC0 Gm24777-201ENSMUST00000157644 107 ntBASIC1.16□□□□□ -2.22
Nup88Q8CEC0 Gm23584-201ENSMUST00000157655 129 ntBASIC1.16□□□□□ -2.22
Nup88Q8CEC0 Mir7091-201ENSMUST00000184075 79 ntBASIC1.16□□□□□ -2.22
Nup88Q8CEC0 Gm43199-201ENSMUST00000200019 307 ntBASIC1.16□□□□□ -2.22
Nup88Q8CEC0 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.16□□□□□ -2.22
Nup88Q8CEC0 Gm24171-201ENSMUST00000104126 131 ntBASIC1.15□□□□□ -2.23
Nup88Q8CEC0 Gm14568-201ENSMUST00000119321 294 ntBASIC1.15□□□□□ -2.23
Nup88Q8CEC0 Gm13246-201ENSMUST00000120994 315 ntBASIC1.15□□□□□ -2.23
Nup88Q8CEC0 Gm12815-201ENSMUST00000121737 135 ntBASIC1.15□□□□□ -2.23
Nup88Q8CEC0 Gm23047-201ENSMUST00000177661 94 ntBASIC1.15□□□□□ -2.23
Nup88Q8CEC0 Gm26073-201ENSMUST00000179906 127 ntBASIC1.15□□□□□ -2.23
Nup88Q8CEC0 Gm22283-201ENSMUST00000082556 161 ntBASIC1.15□□□□□ -2.23
Nup88Q8CEC0 Gm22387-201ENSMUST00000158191 131 ntBASIC1.14□□□□□ -2.23
Nup88Q8CEC0 Gm25851-201ENSMUST00000082794 107 ntBASIC1.14□□□□□ -2.23
Nup88Q8CEC0 Mir10b-201ENSMUST00000083566 68 ntBASIC1.14□□□□□ -2.23
Nup88Q8CEC0 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Nup88Q8CEC0 Mir654-201ENSMUST00000104787 84 ntBASIC1.13□□□□□ -2.23
Nup88Q8CEC0 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Nup88Q8CEC0 Mir669g-201ENSMUST00000116809 123 ntBASIC1.13□□□□□ -2.23
Nup88Q8CEC0 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.13□□□□□ -2.23
Nup88Q8CEC0 Gm22145-201ENSMUST00000157396 148 ntBASIC1.13□□□□□ -2.23
Nup88Q8CEC0 Gm24015-201ENSMUST00000157725 232 ntBASIC1.13□□□□□ -2.23
Nup88Q8CEC0 Gm23892-201ENSMUST00000158105 130 ntBASIC1.13□□□□□ -2.23
Nup88Q8CEC0 Gm20630-201ENSMUST00000177387 551 ntBASIC1.13□□□□□ -2.23
Nup88Q8CEC0 Gm45544-201ENSMUST00000211130 88 ntBASIC1.13□□□□□ -2.23
Nup88Q8CEC0 Snora20-201ENSMUST00000082703 128 ntBASIC1.13□□□□□ -2.23
Nup88Q8CEC0 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC1.12□□□□□ -2.23
Nup88Q8CEC0 Gm27579-201ENSMUST00000158113 63 ntBASIC1.12□□□□□ -2.23
Nup88Q8CEC0 Gm22767-201ENSMUST00000158365 165 ntBASIC1.12□□□□□ -2.23
Nup88Q8CEC0 Gm25838-201ENSMUST00000158920 120 ntBASIC1.12□□□□□ -2.23
Nup88Q8CEC0 Mir6380-201ENSMUST00000184334 81 ntBASIC1.12□□□□□ -2.23
Nup88Q8CEC0 Gm42988-201ENSMUST00000198116 225 ntBASIC1.12□□□□□ -2.23
Nup88Q8CEC0 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.12□□□□□ -2.23
Nup88Q8CEC0 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Nup88Q8CEC0 Gm25323-201ENSMUST00000122555 103 ntBASIC1.11□□□□□ -2.23
Nup88Q8CEC0 Gm24401-201ENSMUST00000157868 91 ntBASIC1.11□□□□□ -2.23
Nup88Q8CEC0 Gm22200-201ENSMUST00000158614 67 ntBASIC1.11□□□□□ -2.23
Nup88Q8CEC0 Gm23141-201ENSMUST00000178682 94 ntBASIC1.11□□□□□ -2.23
Nup88Q8CEC0 Gm28724-201ENSMUST00000186149 625 ntBASIC1.11□□□□□ -2.23
Nup88Q8CEC0 Gm28256-201ENSMUST00000188953 139 ntBASIC1.11□□□□□ -2.23
Nup88Q8CEC0 Gm28559-201ENSMUST00000190532 139 ntBASIC1.11□□□□□ -2.23
Nup88Q8CEC0 Mir27b-201ENSMUST00000083541 73 ntBASIC1.11□□□□□ -2.23
Nup88Q8CEC0 Gm24762-201ENSMUST00000083689 104 ntBASIC1.11□□□□□ -2.23
Nup88Q8CEC0 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.1□□□□□ -2.23
Nup88Q8CEC0 Gm24121-201ENSMUST00000102029 106 ntBASIC1.1□□□□□ -2.23
Nup88Q8CEC0 Gm26415-201ENSMUST00000157673 292 ntBASIC1.1□□□□□ -2.23
Nup88Q8CEC0 Gm25015-201ENSMUST00000158400 128 ntBASIC1.1□□□□□ -2.23
Nup88Q8CEC0 Gm24880-201ENSMUST00000158776 85 ntBASIC1.1□□□□□ -2.23
Nup88Q8CEC0 Gm24020-201ENSMUST00000180156 108 ntBASIC1.1□□□□□ -2.23
Nup88Q8CEC0 Gm6003-201ENSMUST00000187903 463 ntBASIC1.1□□□□□ -2.23
Nup88Q8CEC0 Mir6375-201ENSMUST00000197176 95 ntBASIC1.1□□□□□ -2.23
Nup88Q8CEC0 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Nup88Q8CEC0 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Nup88Q8CEC0 Gm22469-201ENSMUST00000104118 133 ntBASIC1.09□□□□□ -2.23
Nup88Q8CEC0 Gm23130-201ENSMUST00000104252 74 ntBASIC1.09□□□□□ -2.23
Nup88Q8CEC0 Gm26156-201ENSMUST00000116999 123 ntBASIC1.09□□□□□ -2.23
Nup88Q8CEC0 Gm13922-201ENSMUST00000119505 156 ntBASIC1.09□□□□□ -2.23
Nup88Q8CEC0 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.09□□□□□ -2.23
Nup88Q8CEC0 Gm24559-201ENSMUST00000157519 121 ntBASIC1.09□□□□□ -2.23
Nup88Q8CEC0 Gm22515-201ENSMUST00000158273 305 ntBASIC1.09□□□□□ -2.23
Nup88Q8CEC0 Gm23977-201ENSMUST00000177871 74 ntBASIC1.09□□□□□ -2.23
Nup88Q8CEC0 Gm27402-201ENSMUST00000183890 120 ntBASIC1.09□□□□□ -2.23
Nup88Q8CEC0 Gm27365-201ENSMUST00000184041 177 ntBASIC1.09□□□□□ -2.23
Nup88Q8CEC0 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Nup88Q8CEC0 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Nup88Q8CEC0 Gm12771-201ENSMUST00000120246 135 ntBASIC1.08□□□□□ -2.24
Nup88Q8CEC0 Gm25654-201ENSMUST00000158467 88 ntBASIC1.08□□□□□ -2.24
Nup88Q8CEC0 Gm25267-201ENSMUST00000158522 63 ntBASIC1.08□□□□□ -2.24
Nup88Q8CEC0 Gm25464-201ENSMUST00000175481 107 ntBASIC1.08□□□□□ -2.24
Nup88Q8CEC0 Gm25749-201ENSMUST00000175485 111 ntBASIC1.08□□□□□ -2.24
Nup88Q8CEC0 Gm43898-201ENSMUST00000204456 424 ntBASIC1.08□□□□□ -2.24
Nup88Q8CEC0 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 151.9 ms