Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm14671-201ENSMUST00000121790 262 ntBASIC1.39□□□□□ -2.19
Atg4aQ8C9S8 Gm24000-201ENSMUST00000158063 89 ntBASIC1.39□□□□□ -2.19
Atg4aQ8C9S8 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.39□□□□□ -2.19
Atg4aQ8C9S8 Gm16404-201ENSMUST00000177739 468 ntBASIC1.39□□□□□ -2.19
Atg4aQ8C9S8 Gm14598-201ENSMUST00000180109 468 ntBASIC1.39□□□□□ -2.19
Atg4aQ8C9S8 Gm14625-201ENSMUST00000180231 468 ntBASIC1.39□□□□□ -2.19
Atg4aQ8C9S8 Gm45544-201ENSMUST00000211130 88 ntBASIC1.39□□□□□ -2.19
Atg4aQ8C9S8 Gm25855-201ENSMUST00000082787 72 ntBASIC1.39□□□□□ -2.19
Atg4aQ8C9S8 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 Mir880-201ENSMUST00000104809 78 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 Gm24262-201ENSMUST00000157431 144 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 Gm22082-201ENSMUST00000157587 161 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 Gm24345-201ENSMUST00000158706 124 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 Gm26363-201ENSMUST00000158866 83 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 Gm27699-201ENSMUST00000183553 180 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 Mir7675-201ENSMUST00000184262 58 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 Gm44922-201ENSMUST00000206690 90 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 Gm25038-201ENSMUST00000082928 130 ntBASIC1.38□□□□□ -2.19
Atg4aQ8C9S8 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.37□□□□□ -2.19
Atg4aQ8C9S8 Gm26074-201ENSMUST00000104063 129 ntBASIC1.37□□□□□ -2.19
Atg4aQ8C9S8 Gm23083-201ENSMUST00000157851 116 ntBASIC1.37□□□□□ -2.19
Atg4aQ8C9S8 Gm26213-201ENSMUST00000158582 110 ntBASIC1.37□□□□□ -2.19
Atg4aQ8C9S8 Gm26360-201ENSMUST00000158872 103 ntBASIC1.37□□□□□ -2.19
Atg4aQ8C9S8 Gm23967-201ENSMUST00000175062 78 ntBASIC1.37□□□□□ -2.19
Atg4aQ8C9S8 Mir3061-201ENSMUST00000175129 91 ntBASIC1.37□□□□□ -2.19
Atg4aQ8C9S8 Mir5104-201ENSMUST00000175319 94 ntBASIC1.37□□□□□ -2.19
Atg4aQ8C9S8 Gm22911-201ENSMUST00000177920 107 ntBASIC1.37□□□□□ -2.19
Atg4aQ8C9S8 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.37□□□□□ -2.19
Atg4aQ8C9S8 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.37□□□□□ -2.19
Atg4aQ8C9S8 Gm24683-201ENSMUST00000104840 88 ntBASIC1.36□□□□□ -2.19
Atg4aQ8C9S8 Gm14567-201ENSMUST00000117155 174 ntBASIC1.36□□□□□ -2.19
Atg4aQ8C9S8 Gm26073-201ENSMUST00000179906 127 ntBASIC1.36□□□□□ -2.19
Atg4aQ8C9S8 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.36□□□□□ -2.19
Atg4aQ8C9S8 Gm24523-201ENSMUST00000083965 132 ntBASIC1.36□□□□□ -2.19
Atg4aQ8C9S8 Mir544-201ENSMUST00000103813 78 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Gm23990-201ENSMUST00000117031 117 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Gm25599-201ENSMUST00000157816 103 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Gm23277-201ENSMUST00000157914 136 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Gm22099-201ENSMUST00000157925 123 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Gm22387-201ENSMUST00000158191 131 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Gm24131-201ENSMUST00000158539 107 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Gm22011-201ENSMUST00000158790 123 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Gm22403-201ENSMUST00000174919 84 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Mir6381-201ENSMUST00000183426 87 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Gm27928-201ENSMUST00000183747 256 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Gm37116-201ENSMUST00000195161 147 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Gm22283-201ENSMUST00000082556 161 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Gm24252-201ENSMUST00000083700 132 ntBASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.35□□□□□ -2.19
Atg4aQ8C9S8 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Atg4aQ8C9S8 Mir343-201ENSMUST00000102360 75 ntBASIC1.34□□□□□ -2.19
Atg4aQ8C9S8 Gm22780-201ENSMUST00000104084 132 ntBASIC1.34□□□□□ -2.19
Atg4aQ8C9S8 Gm25541-201ENSMUST00000116888 126 ntBASIC1.34□□□□□ -2.19
Atg4aQ8C9S8 Gm13922-201ENSMUST00000119505 156 ntBASIC1.34□□□□□ -2.19
Atg4aQ8C9S8 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.34□□□□□ -2.19
Atg4aQ8C9S8 Gm22606-201ENSMUST00000158290 103 ntBASIC1.34□□□□□ -2.19
Atg4aQ8C9S8 Gm26097-201ENSMUST00000179642 93 ntBASIC1.34□□□□□ -2.19
Atg4aQ8C9S8 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.34□□□□□ -2.19
Atg4aQ8C9S8 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.34□□□□□ -2.19
Atg4aQ8C9S8 Mir488-201ENSMUST00000093595 109 ntBASIC1.34□□□□□ -2.19
Atg4aQ8C9S8 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.34□□□□□ -2.2
Atg4aQ8C9S8 Gm22612-201ENSMUST00000158293 101 ntBASIC1.33□□□□□ -2.2
Atg4aQ8C9S8 Gm16546-201ENSMUST00000159442 355 ntBASIC1.33□□□□□ -2.2
Atg4aQ8C9S8 Gm20391-201ENSMUST00000174722 106 ntBASIC1.33□□□□□ -2.2
Atg4aQ8C9S8 Gm23636-201ENSMUST00000175070 95 ntBASIC1.33□□□□□ -2.2
Atg4aQ8C9S8 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.33□□□□□ -2.2
Atg4aQ8C9S8 Gm22738-201ENSMUST00000083440 147 ntBASIC1.33□□□□□ -2.2
Atg4aQ8C9S8 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.33□□□□□ -2.2
Atg4aQ8C9S8 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.33□□□□□ -2.2
Atg4aQ8C9S8 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.33□□□□□ -2.2
Atg4aQ8C9S8 Gm13345-201ENSMUST00000121928 228 ntBASIC1.32□□□□□ -2.2
Atg4aQ8C9S8 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.32□□□□□ -2.2
Atg4aQ8C9S8 Gm24106-201ENSMUST00000175498 127 ntBASIC1.32□□□□□ -2.2
Atg4aQ8C9S8 Gm23419-201ENSMUST00000175523 84 ntBASIC1.32□□□□□ -2.2
Atg4aQ8C9S8 Mir21b-201ENSMUST00000184317 108 ntBASIC1.32□□□□□ -2.2
Atg4aQ8C9S8 Mir7665-201ENSMUST00000184907 63 ntBASIC1.32□□□□□ -2.2
Atg4aQ8C9S8 Gm42623-201ENSMUST00000197225 379 ntBASIC1.32□□□□□ -2.2
Atg4aQ8C9S8 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.32□□□□□ -2.2
Atg4aQ8C9S8 Mir22-201ENSMUST00000083595 95 ntBASIC1.32□□□□□ -2.2
Atg4aQ8C9S8 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Atg4aQ8C9S8 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
Atg4aQ8C9S8 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Atg4aQ8C9S8 Mir1298-201ENSMUST00000116681 98 ntBASIC1.31□□□□□ -2.2
Atg4aQ8C9S8 Gm25882-201ENSMUST00000157784 85 ntBASIC1.31□□□□□ -2.2
Atg4aQ8C9S8 Gm26403-201ENSMUST00000158500 105 ntBASIC1.31□□□□□ -2.2
Atg4aQ8C9S8 Gm25069-201ENSMUST00000175238 86 ntBASIC1.31□□□□□ -2.2
Atg4aQ8C9S8 Gm22348-201ENSMUST00000178674 79 ntBASIC1.31□□□□□ -2.2
Atg4aQ8C9S8 Mir8090-201ENSMUST00000185078 136 ntBASIC1.31□□□□□ -2.2
Atg4aQ8C9S8 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.31□□□□□ -2.2
Atg4aQ8C9S8 Snord1a-201ENSMUST00000083160 74 ntBASIC1.31□□□□□ -2.2
Atg4aQ8C9S8 Gm25068-201ENSMUST00000103895 110 ntBASIC1.3□□□□□ -2.2
Atg4aQ8C9S8 Gm23080-201ENSMUST00000157846 103 ntBASIC1.3□□□□□ -2.2
Atg4aQ8C9S8 Gm25716-201ENSMUST00000158628 104 ntBASIC1.3□□□□□ -2.2
Atg4aQ8C9S8 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.3□□□□□ -2.2
Atg4aQ8C9S8 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.3□□□□□ -2.2
Atg4aQ8C9S8 Gm25636-201ENSMUST00000082666 133 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms