Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm25978-201ENSMUST00000158698 90 ntBASIC2.83□□□□□ -1.96
Usp40Q8BWR4 Mir7017-201ENSMUST00000184894 62 ntBASIC2.83□□□□□ -1.96
Usp40Q8BWR4 Gm42960-201ENSMUST00000202160 241 ntBASIC2.83□□□□□ -1.96
Usp40Q8BWR4 Gm44057-201ENSMUST00000204547 96 ntBASIC2.83□□□□□ -1.96
Usp40Q8BWR4 Gm24261-201ENSMUST00000083744 104 ntBASIC2.83□□□□□ -1.96
Usp40Q8BWR4 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Usp40Q8BWR4 Gm13246-201ENSMUST00000120994 315 ntBASIC2.82□□□□□ -1.96
Usp40Q8BWR4 Gm24947-201ENSMUST00000158334 110 ntBASIC2.82□□□□□ -1.96
Usp40Q8BWR4 Gm22527-201ENSMUST00000158816 106 ntBASIC2.82□□□□□ -1.96
Usp40Q8BWR4 Gm27365-201ENSMUST00000184041 177 ntBASIC2.82□□□□□ -1.96
Usp40Q8BWR4 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.82□□□□□ -1.96
Usp40Q8BWR4 Gm44459-201ENSMUST00000203926 160 ntBASIC2.82□□□□□ -1.96
Usp40Q8BWR4 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.82□□□□□ -1.96
Usp40Q8BWR4 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.82□□□□□ -1.96
Usp40Q8BWR4 Gm24977-201ENSMUST00000083106 163 ntBASIC2.82□□□□□ -1.96
Usp40Q8BWR4 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Usp40Q8BWR4 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.81□□□□□ -1.96
Usp40Q8BWR4 Gm26076-201ENSMUST00000104065 105 ntBASIC2.81□□□□□ -1.96
Usp40Q8BWR4 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.81□□□□□ -1.96
Usp40Q8BWR4 Gm25112-201ENSMUST00000122680 104 ntBASIC2.81□□□□□ -1.96
Usp40Q8BWR4 Mir3569-201ENSMUST00000185080 58 ntBASIC2.81□□□□□ -1.96
Usp40Q8BWR4 Gm29658-201ENSMUST00000185404 230 ntBASIC2.81□□□□□ -1.96
Usp40Q8BWR4 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.81□□□□□ -1.96
Usp40Q8BWR4 Gm22972-201ENSMUST00000083297 131 ntBASIC2.81□□□□□ -1.96
Usp40Q8BWR4 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Usp40Q8BWR4 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.81□□□□□ -1.96
Usp40Q8BWR4 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Usp40Q8BWR4 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Usp40Q8BWR4 Gm22545-201ENSMUST00000104350 132 ntBASIC2.8□□□□□ -1.96
Usp40Q8BWR4 Mir878-201ENSMUST00000104680 78 ntBASIC2.8□□□□□ -1.96
Usp40Q8BWR4 Gm26099-201ENSMUST00000157248 109 ntBASIC2.8□□□□□ -1.96
Usp40Q8BWR4 Gm22083-201ENSMUST00000157586 102 ntBASIC2.8□□□□□ -1.96
Usp40Q8BWR4 Gm25771-201ENSMUST00000158565 144 ntBASIC2.8□□□□□ -1.96
Usp40Q8BWR4 Gm22858-201ENSMUST00000174972 76 ntBASIC2.8□□□□□ -1.96
Usp40Q8BWR4 Gm24573-201ENSMUST00000175499 112 ntBASIC2.8□□□□□ -1.96
Usp40Q8BWR4 Gm25933-201ENSMUST00000178943 108 ntBASIC2.8□□□□□ -1.96
Usp40Q8BWR4 Gm44666-201ENSMUST00000208544 391 ntBASIC2.8□□□□□ -1.96
Usp40Q8BWR4 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.8□□□□□ -1.96
Usp40Q8BWR4 Gm26126-201ENSMUST00000083188 164 ntBASIC2.8□□□□□ -1.96
Usp40Q8BWR4 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.8□□□□□ -1.96
Usp40Q8BWR4 Gm23010-201ENSMUST00000104151 126 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 Gm6954-201ENSMUST00000117416 225 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 Gm22319-201ENSMUST00000157147 122 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 Gm23670-201ENSMUST00000157469 119 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 Gm23113-201ENSMUST00000158477 99 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 Gm23342-201ENSMUST00000158958 115 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 Gm7258-201ENSMUST00000179317 300 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 Gm24390-201ENSMUST00000179578 62 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 Mir7016-201ENSMUST00000184308 72 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.79□□□□□ -1.96
Usp40Q8BWR4 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 Gm26326-201ENSMUST00000083070 129 ntBASIC2.79□□□□□ -1.96
Usp40Q8BWR4 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Usp40Q8BWR4 Gm26420-201ENSMUST00000104273 103 ntBASIC2.78□□□□□ -1.96
Usp40Q8BWR4 Gm23470-201ENSMUST00000157129 120 ntBASIC2.78□□□□□ -1.96
Usp40Q8BWR4 Gm24478-201ENSMUST00000157439 158 ntBASIC2.78□□□□□ -1.96
Usp40Q8BWR4 Gm22163-201ENSMUST00000158408 135 ntBASIC2.78□□□□□ -1.96
Usp40Q8BWR4 Gm23349-201ENSMUST00000158432 98 ntBASIC2.78□□□□□ -1.96
Usp40Q8BWR4 Gm37579-201ENSMUST00000194291 142 ntBASIC2.78□□□□□ -1.96
Usp40Q8BWR4 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Usp40Q8BWR4 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Usp40Q8BWR4 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Gm23015-201ENSMUST00000104145 128 ntBASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Gm15281-201ENSMUST00000125181 351 ntBASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Gm24911-201ENSMUST00000157292 136 ntBASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Mir1927-201ENSMUST00000158579 109 ntBASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Snora69-201ENSMUST00000083708 131 ntBASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Usp40Q8BWR4 Gm22099-201ENSMUST00000157925 123 ntBASIC2.76□□□□□ -1.97
Usp40Q8BWR4 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.76□□□□□ -1.97
Usp40Q8BWR4 Snora41-201ENSMUST00000082668 132 ntBASIC2.76□□□□□ -1.97
Usp40Q8BWR4 Gm24615-201ENSMUST00000083268 113 ntBASIC2.76□□□□□ -1.97
Usp40Q8BWR4 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Usp40Q8BWR4 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.75□□□□□ -1.97
Usp40Q8BWR4 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Usp40Q8BWR4 Gm23237-201ENSMUST00000104639 92 ntBASIC2.75□□□□□ -1.97
Usp40Q8BWR4 Gm24510-201ENSMUST00000174965 94 ntBASIC2.75□□□□□ -1.97
Usp40Q8BWR4 Mir6353-201ENSMUST00000183596 113 ntBASIC2.75□□□□□ -1.97
Usp40Q8BWR4 Mir6928-201ENSMUST00000185166 70 ntBASIC2.75□□□□□ -1.97
Usp40Q8BWR4 Gm9156-201ENSMUST00000189660 463 ntBASIC2.75□□□□□ -1.97
Usp40Q8BWR4 Gm44482-201ENSMUST00000199232 103 ntBASIC2.75□□□□□ -1.97
Usp40Q8BWR4 Gm35736-201ENSMUST00000203681 313 ntBASIC2.75□□□□□ -1.97
Usp40Q8BWR4 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.75□□□□□ -1.97
Usp40Q8BWR4 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Usp40Q8BWR4 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.74□□□□□ -1.97
Usp40Q8BWR4 Gm25888-201ENSMUST00000157778 302 ntBASIC2.74□□□□□ -1.97
Usp40Q8BWR4 Gm22727-201ENSMUST00000158090 116 ntBASIC2.74□□□□□ -1.97
Usp40Q8BWR4 Gm24394-201ENSMUST00000158141 123 ntBASIC2.74□□□□□ -1.97
Usp40Q8BWR4 Gm25836-201ENSMUST00000158918 123 ntBASIC2.74□□□□□ -1.97
Usp40Q8BWR4 Gm24813-201ENSMUST00000175310 84 ntBASIC2.74□□□□□ -1.97
Usp40Q8BWR4 Mir7009-201ENSMUST00000184519 64 ntBASIC2.74□□□□□ -1.97
Usp40Q8BWR4 Gm45654-201ENSMUST00000210980 123 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 135.2 ms