Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.3□□□□□ -2.36
Ccdc40Q8BI79 Mir448-201ENSMUST00000083516 112 ntBASIC0.3□□□□□ -2.36
Ccdc40Q8BI79 Gm22032-201ENSMUST00000116946 116 ntBASIC0.29□□□□□ -2.36
Ccdc40Q8BI79 Gm13922-201ENSMUST00000119505 156 ntBASIC0.29□□□□□ -2.36
Ccdc40Q8BI79 Gm24476-201ENSMUST00000157437 131 ntBASIC0.29□□□□□ -2.36
Ccdc40Q8BI79 Gm25241-201ENSMUST00000174909 84 ntBASIC0.29□□□□□ -2.36
Ccdc40Q8BI79 Gm26217-201ENSMUST00000175212 84 ntBASIC0.29□□□□□ -2.36
Ccdc40Q8BI79 Gm28211-201ENSMUST00000190920 315 ntBASIC0.29□□□□□ -2.36
Ccdc40Q8BI79 Gm23969-201ENSMUST00000083324 74 ntBASIC0.29□□□□□ -2.36
Ccdc40Q8BI79 Gm22450-201ENSMUST00000179641 107 ntBASIC0.28□□□□□ -2.36
Ccdc40Q8BI79 Gm25473-201ENSMUST00000180191 107 ntBASIC0.28□□□□□ -2.36
Ccdc40Q8BI79 Gm45616-201ENSMUST00000211711 319 ntBASIC0.28□□□□□ -2.36
Ccdc40Q8BI79 Gm24856-201ENSMUST00000082809 107 ntBASIC0.28□□□□□ -2.36
Ccdc40Q8BI79 Gm26497-201ENSMUST00000083146 107 ntBASIC0.28□□□□□ -2.36
Ccdc40Q8BI79 Gm26071-201ENSMUST00000083261 107 ntBASIC0.28□□□□□ -2.36
Ccdc40Q8BI79 Gm24521-201ENSMUST00000083958 107 ntBASIC0.28□□□□□ -2.36
Ccdc40Q8BI79 Gm22003-201ENSMUST00000101885 107 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Gm24379-201ENSMUST00000122695 86 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Gm23410-201ENSMUST00000179967 107 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Gm22756-201ENSMUST00000180118 107 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Gm27475-201ENSMUST00000183420 61 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Mir7065-201ENSMUST00000185110 61 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Gm25142-201ENSMUST00000082698 107 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Gm22505-201ENSMUST00000082956 108 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Gm22363-201ENSMUST00000083100 108 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Gm23814-201ENSMUST00000083230 102 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Gm23095-201ENSMUST00000083446 107 ntBASIC0.27□□□□□ -2.37
Ccdc40Q8BI79 Gm25318-201ENSMUST00000122554 314 ntBASIC0.26□□□□□ -2.37
Ccdc40Q8BI79 Gm24737-201ENSMUST00000158861 100 ntBASIC0.26□□□□□ -2.37
Ccdc40Q8BI79 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.26□□□□□ -2.37
Ccdc40Q8BI79 Gm28579-201ENSMUST00000186143 369 ntBASIC0.26□□□□□ -2.37
Ccdc40Q8BI79 Gm3702-201ENSMUST00000211754 346 ntBASIC0.26□□□□□ -2.37
Ccdc40Q8BI79 Gm19572-201ENSMUST00000214326 338 ntBASIC0.26□□□□□ -2.37
Ccdc40Q8BI79 Gm23941-201ENSMUST00000101953 107 ntBASIC0.25□□□□□ -2.37
Ccdc40Q8BI79 Snord69-201ENSMUST00000104024 80 ntBASIC0.25□□□□□ -2.37
Ccdc40Q8BI79 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.25□□□□□ -2.37
Ccdc40Q8BI79 Gm28418-201ENSMUST00000186179 423 ntBASIC0.25□□□□□ -2.37
Ccdc40Q8BI79 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.25□□□□□ -2.37
Ccdc40Q8BI79 Gm23321-201ENSMUST00000104465 126 ntBASIC0.24□□□□□ -2.37
Ccdc40Q8BI79 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.24□□□□□ -2.37
Ccdc40Q8BI79 Gm25424-201ENSMUST00000157612 58 ntBASIC0.24□□□□□ -2.37
Ccdc40Q8BI79 Gm22887-201ENSMUST00000178586 107 ntBASIC0.24□□□□□ -2.37
Ccdc40Q8BI79 Mir6985-201ENSMUST00000184641 61 ntBASIC0.24□□□□□ -2.37
Ccdc40Q8BI79 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.24□□□□□ -2.37
Ccdc40Q8BI79 Gm7240-201ENSMUST00000220769 664 ntBASIC0.24□□□□□ -2.37
Ccdc40Q8BI79 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Ccdc40Q8BI79 Gm22586-201ENSMUST00000157507 122 ntBASIC0.23□□□□□ -2.37
Ccdc40Q8BI79 Gm16546-201ENSMUST00000159442 355 ntBASIC0.23□□□□□ -2.37
Ccdc40Q8BI79 Mir6377-201ENSMUST00000183760 114 ntBASIC0.23□□□□□ -2.37
Ccdc40Q8BI79 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.23□□□□□ -2.37
Ccdc40Q8BI79 Gm23989-201ENSMUST00000117030 66 ntBASIC0.22□□□□□ -2.37
Ccdc40Q8BI79 Gm25494-201ENSMUST00000158143 100 ntBASIC0.22□□□□□ -2.37
Ccdc40Q8BI79 Mir669k-201ENSMUST00000177742 127 ntBASIC0.22□□□□□ -2.37
Ccdc40Q8BI79 Gm25673-201ENSMUST00000179957 127 ntBASIC0.22□□□□□ -2.37
Ccdc40Q8BI79 Mir6365-201ENSMUST00000183990 101 ntBASIC0.22□□□□□ -2.37
Ccdc40Q8BI79 Mir7227-201ENSMUST00000200408 59 ntBASIC0.22□□□□□ -2.37
Ccdc40Q8BI79 Gm22576-201ENSMUST00000083733 104 ntBASIC0.22□□□□□ -2.37
Ccdc40Q8BI79 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.22□□□□□ -2.37
Ccdc40Q8BI79 Gm24833-201ENSMUST00000116775 120 ntBASIC0.21□□□□□ -2.38
Ccdc40Q8BI79 Gm22051-201ENSMUST00000117002 127 ntBASIC0.21□□□□□ -2.38
Ccdc40Q8BI79 Gm23655-201ENSMUST00000122627 105 ntBASIC0.21□□□□□ -2.38
Ccdc40Q8BI79 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.21□□□□□ -2.38
Ccdc40Q8BI79 Mir7010-201ENSMUST00000183464 63 ntBASIC0.21□□□□□ -2.38
Ccdc40Q8BI79 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.21□□□□□ -2.38
Ccdc40Q8BI79 Gm24635-201ENSMUST00000122712 128 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Gm22999-201ENSMUST00000157082 88 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Gm24559-201ENSMUST00000157519 121 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Scarna8-201ENSMUST00000158333 131 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Gm23763-201ENSMUST00000158345 60 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Gm22448-201ENSMUST00000179254 107 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Gm25024-201ENSMUST00000179667 104 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Gm27717-201ENSMUST00000183933 151 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Gm37997-201ENSMUST00000193515 267 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Gm44464-201ENSMUST00000198010 138 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Gm42594-201ENSMUST00000199511 246 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Gm44563-201ENSMUST00000207958 178 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Gm26123-201ENSMUST00000083363 135 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Mir200a-201ENSMUST00000083466 90 ntBASIC0.2□□□□□ -2.38
Ccdc40Q8BI79 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Ccdc40Q8BI79 Gm22767-201ENSMUST00000158365 165 ntBASIC0.19□□□□□ -2.38
Ccdc40Q8BI79 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Ccdc40Q8BI79 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.19□□□□□ -2.38
Ccdc40Q8BI79 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Ccdc40Q8BI79 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Ccdc40Q8BI79 Mir710-201ENSMUST00000102088 110 ntBASIC0.18□□□□□ -2.38
Ccdc40Q8BI79 Gm26482-201ENSMUST00000158015 62 ntBASIC0.18□□□□□ -2.38
Ccdc40Q8BI79 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.18□□□□□ -2.38
Ccdc40Q8BI79 Gm22239-201ENSMUST00000175220 103 ntBASIC0.18□□□□□ -2.38
Ccdc40Q8BI79 Gm26447-201ENSMUST00000082448 129 ntBASIC0.18□□□□□ -2.38
Ccdc40Q8BI79 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Ccdc40Q8BI79 Gm13797-201ENSMUST00000121792 120 ntBASIC0.17□□□□□ -2.38
Ccdc40Q8BI79 Gm25323-201ENSMUST00000122555 103 ntBASIC0.17□□□□□ -2.38
Ccdc40Q8BI79 Gm24509-201ENSMUST00000157086 101 ntBASIC0.17□□□□□ -2.38
Ccdc40Q8BI79 Gm25358-201ENSMUST00000157189 101 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 163.1 ms