Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm44419-201ENSMUST00000203338 229 ntBASIC0.1□□□□□ -2.39
Clrn3Q8BHH8 Gm44959-201ENSMUST00000209127 231 ntBASIC0.1□□□□□ -2.39
Clrn3Q8BHH8 Mir200a-201ENSMUST00000083466 90 ntBASIC0.1□□□□□ -2.39
Clrn3Q8BHH8 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.09□□□□□ -2.4
Clrn3Q8BHH8 Gm13246-201ENSMUST00000120994 315 ntBASIC0.09□□□□□ -2.4
Clrn3Q8BHH8 Gm24501-201ENSMUST00000158452 62 ntBASIC0.09□□□□□ -2.4
Clrn3Q8BHH8 Mir7079-201ENSMUST00000184697 69 ntBASIC0.09□□□□□ -2.4
Clrn3Q8BHH8 Gm29665-201ENSMUST00000191457 528 ntBASIC0.09□□□□□ -2.4
Clrn3Q8BHH8 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.09□□□□□ -2.4
Clrn3Q8BHH8 Gm36189-201ENSMUST00000204113 523 ntBASIC0.09□□□□□ -2.4
Clrn3Q8BHH8 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.09□□□□□ -2.4
Clrn3Q8BHH8 Gm45616-201ENSMUST00000211711 319 ntBASIC0.09□□□□□ -2.4
Clrn3Q8BHH8 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.09□□□□□ -2.4
Clrn3Q8BHH8 Gm24555-201ENSMUST00000104548 124 ntBASIC0.08□□□□□ -2.4
Clrn3Q8BHH8 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.08□□□□□ -2.4
Clrn3Q8BHH8 Gm15069-201ENSMUST00000117792 192 ntBASIC0.08□□□□□ -2.4
Clrn3Q8BHH8 Gm15068-201ENSMUST00000119796 192 ntBASIC0.08□□□□□ -2.4
Clrn3Q8BHH8 Gm11835-201ENSMUST00000120635 663 ntBASIC0.08□□□□□ -2.4
Clrn3Q8BHH8 Gm25718-201ENSMUST00000158632 118 ntBASIC0.08□□□□□ -2.4
Clrn3Q8BHH8 Gm43563-201ENSMUST00000196761 198 ntBASIC0.08□□□□□ -2.4
Clrn3Q8BHH8 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.08□□□□□ -2.4
Clrn3Q8BHH8 Mir1197-201ENSMUST00000117037 120 ntBASIC0.07□□□□□ -2.4
Clrn3Q8BHH8 Gm22097-201ENSMUST00000157929 278 ntBASIC0.07□□□□□ -2.4
Clrn3Q8BHH8 Gm22118-201ENSMUST00000175593 171 ntBASIC0.07□□□□□ -2.4
Clrn3Q8BHH8 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.07□□□□□ -2.4
Clrn3Q8BHH8 Gm43976-201ENSMUST00000203637 235 ntBASIC0.07□□□□□ -2.4
Clrn3Q8BHH8 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.07□□□□□ -2.4
Clrn3Q8BHH8 Gm44687-201ENSMUST00000204975 235 ntBASIC0.07□□□□□ -2.4
Clrn3Q8BHH8 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.07□□□□□ -2.4
Clrn3Q8BHH8 Gm26479-201ENSMUST00000122620 106 ntBASIC0.06□□□□□ -2.4
Clrn3Q8BHH8 Gm23761-201ENSMUST00000158347 104 ntBASIC0.06□□□□□ -2.4
Clrn3Q8BHH8 Gm24772-201ENSMUST00000158507 110 ntBASIC0.06□□□□□ -2.4
Clrn3Q8BHH8 Gm25633-201ENSMUST00000178565 107 ntBASIC0.06□□□□□ -2.4
Clrn3Q8BHH8 Gm29512-201ENSMUST00000185544 315 ntBASIC0.06□□□□□ -2.4
Clrn3Q8BHH8 Mir219b-201ENSMUST00000198317 65 ntBASIC0.06□□□□□ -2.4
Clrn3Q8BHH8 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.06□□□□□ -2.4
Clrn3Q8BHH8 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.06□□□□□ -2.4
Clrn3Q8BHH8 Gm24204-201ENSMUST00000082950 107 ntBASIC0.06□□□□□ -2.4
Clrn3Q8BHH8 Gm37313-201ENSMUST00000191673 290 ntBASIC0.05□□□□□ -2.4
Clrn3Q8BHH8 Gm24208-201ENSMUST00000082783 135 ntBASIC0.05□□□□□ -2.4
Clrn3Q8BHH8 Mir547-201ENSMUST00000102051 78 ntBASIC0.04□□□□□ -2.4
Clrn3Q8BHH8 Gm25494-201ENSMUST00000158143 100 ntBASIC0.04□□□□□ -2.4
Clrn3Q8BHH8 Gm22431-201ENSMUST00000158545 107 ntBASIC0.04□□□□□ -2.4
Clrn3Q8BHH8 Gm27402-201ENSMUST00000183890 120 ntBASIC0.04□□□□□ -2.4
Clrn3Q8BHH8 Mir8107-201ENSMUST00000184024 117 ntBASIC0.04□□□□□ -2.4
Clrn3Q8BHH8 Snord82-201ENSMUST00000082889 70 ntBASIC0.04□□□□□ -2.4
Clrn3Q8BHH8 Gm23242-201ENSMUST00000083055 107 ntBASIC0.04□□□□□ -2.4
Clrn3Q8BHH8 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.04□□□□□ -2.4
Clrn3Q8BHH8 Gm26255-201ENSMUST00000122492 103 ntBASIC0.03□□□□□ -2.4
Clrn3Q8BHH8 Gm22984-201ENSMUST00000122751 122 ntBASIC0.03□□□□□ -2.4
Clrn3Q8BHH8 Gm27723-201ENSMUST00000157398 63 ntBASIC0.03□□□□□ -2.4
Clrn3Q8BHH8 Gm24728-201ENSMUST00000158226 125 ntBASIC0.03□□□□□ -2.4
Clrn3Q8BHH8 Gm24500-201ENSMUST00000158447 124 ntBASIC0.03□□□□□ -2.4
Clrn3Q8BHH8 Gm44457-201ENSMUST00000198109 76 ntBASIC0.03□□□□□ -2.4
Clrn3Q8BHH8 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.03□□□□□ -2.4
Clrn3Q8BHH8 Gm25142-201ENSMUST00000082698 107 ntBASIC0.03□□□□□ -2.4
Clrn3Q8BHH8 Gm13922-201ENSMUST00000119505 156 ntBASIC0.02□□□□□ -2.41
Clrn3Q8BHH8 Mir6377-201ENSMUST00000183760 114 ntBASIC0.02□□□□□ -2.41
Clrn3Q8BHH8 Gm27980-201ENSMUST00000184094 169 ntBASIC0.02□□□□□ -2.41
Clrn3Q8BHH8 Gm44464-201ENSMUST00000198010 138 ntBASIC0.02□□□□□ -2.41
Clrn3Q8BHH8 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.02□□□□□ -2.41
Clrn3Q8BHH8 Gm22576-201ENSMUST00000083733 104 ntBASIC0.02□□□□□ -2.41
Clrn3Q8BHH8 Gm11904-201ENSMUST00000120562 248 ntBASIC0.01□□□□□ -2.41
Clrn3Q8BHH8 Gm24509-201ENSMUST00000157086 101 ntBASIC0.01□□□□□ -2.41
Clrn3Q8BHH8 Gm25358-201ENSMUST00000157189 101 ntBASIC0.01□□□□□ -2.41
Clrn3Q8BHH8 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.01□□□□□ -2.41
Clrn3Q8BHH8 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.01□□□□□ -2.41
Clrn3Q8BHH8 Mir670-201ENSMUST00000102380 100 ntBASIC0□□□□□ -2.41
Clrn3Q8BHH8 Gm25496-201ENSMUST00000104430 120 ntBASIC0□□□□□ -2.41
Clrn3Q8BHH8 Gm22999-201ENSMUST00000157082 88 ntBASIC0□□□□□ -2.41
Clrn3Q8BHH8 Gm23783-201ENSMUST00000157941 102 ntBASIC0□□□□□ -2.41
Clrn3Q8BHH8 Gm27943-201ENSMUST00000184844 116 ntBASIC0□□□□□ -2.41
Clrn3Q8BHH8 AC166341.3-201ENSMUST00000221861 114 ntBASIC0□□□□□ -2.41
Clrn3Q8BHH8 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Clrn3Q8BHH8 Gm26123-201ENSMUST00000083363 135 ntBASIC0□□□□□ -2.41
Clrn3Q8BHH8 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0□□□□□ -2.41
Clrn3Q8BHH8 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.01□□□□□ -2.41
Clrn3Q8BHH8 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Clrn3Q8BHH8 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.01□□□□□ -2.41
Clrn3Q8BHH8 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.01□□□□□ -2.41
Clrn3Q8BHH8 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.01□□□□□ -2.41
Clrn3Q8BHH8 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.01□□□□□ -2.41
Clrn3Q8BHH8 AC116319.1-201ENSMUST00000227765 222 ntBASIC-0.01□□□□□ -2.41
Clrn3Q8BHH8 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.01□□□□□ -2.41
Clrn3Q8BHH8 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.02□□□□□ -2.41
Clrn3Q8BHH8 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.02□□□□□ -2.41
Clrn3Q8BHH8 Gm24211-201ENSMUST00000158264 107 ntBASIC-0.02□□□□□ -2.41
Clrn3Q8BHH8 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.02□□□□□ -2.41
Clrn3Q8BHH8 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-0.02□□□□□ -2.41
Clrn3Q8BHH8 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.02□□□□□ -2.41
Clrn3Q8BHH8 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.02□□□□□ -2.41
Clrn3Q8BHH8 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Clrn3Q8BHH8 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.03□□□□□ -2.41
Clrn3Q8BHH8 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.03□□□□□ -2.41
Clrn3Q8BHH8 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.03□□□□□ -2.41
Clrn3Q8BHH8 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.03□□□□□ -2.41
Clrn3Q8BHH8 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.03□□□□□ -2.41
Clrn3Q8BHH8 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Clrn3Q8BHH8 Mir6390-201ENSMUST00000184405 129 ntBASIC-0.03□□□□□ -2.41
Clrn3Q8BHH8 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms