Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm13725-201ENSMUST00000122139 207 ntBASIC0.41□□□□□ -2.34
Ush1gQ80T11 Gm26090-201ENSMUST00000157897 128 ntBASIC0.41□□□□□ -2.34
Ush1gQ80T11 Gm22097-201ENSMUST00000157929 278 ntBASIC0.41□□□□□ -2.34
Ush1gQ80T11 Gm24547-201ENSMUST00000158649 149 ntBASIC0.41□□□□□ -2.34
Ush1gQ80T11 Gm22118-201ENSMUST00000175593 171 ntBASIC0.41□□□□□ -2.34
Ush1gQ80T11 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.41□□□□□ -2.34
Ush1gQ80T11 Gm23969-201ENSMUST00000083324 74 ntBASIC0.41□□□□□ -2.34
Ush1gQ80T11 Gm22553-201ENSMUST00000157797 295 ntBASIC0.4□□□□□ -2.35
Ush1gQ80T11 Gm23278-201ENSMUST00000157911 143 ntBASIC0.4□□□□□ -2.35
Ush1gQ80T11 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.4□□□□□ -2.35
Ush1gQ80T11 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.4□□□□□ -2.35
Ush1gQ80T11 Gm44858-201ENSMUST00000207360 154 ntBASIC0.4□□□□□ -2.35
Ush1gQ80T11 Gm24453-201ENSMUST00000083346 76 ntBASIC0.4□□□□□ -2.35
Ush1gQ80T11 Mir710-201ENSMUST00000102088 110 ntBASIC0.39□□□□□ -2.35
Ush1gQ80T11 Gm22786-201ENSMUST00000104086 122 ntBASIC0.39□□□□□ -2.35
Ush1gQ80T11 Gm26303-201ENSMUST00000116845 119 ntBASIC0.39□□□□□ -2.35
Ush1gQ80T11 Gm23853-201ENSMUST00000158375 104 ntBASIC0.39□□□□□ -2.35
Ush1gQ80T11 Gm25718-201ENSMUST00000158632 118 ntBASIC0.39□□□□□ -2.35
Ush1gQ80T11 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.39□□□□□ -2.35
Ush1gQ80T11 Gm38183-201ENSMUST00000193189 205 ntBASIC0.39□□□□□ -2.35
Ush1gQ80T11 Gm37404-201ENSMUST00000195726 359 ntBASIC0.39□□□□□ -2.35
Ush1gQ80T11 Mir6896-201ENSMUST00000198033 73 ntBASIC0.39□□□□□ -2.35
Ush1gQ80T11 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.39□□□□□ -2.35
Ush1gQ80T11 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.39□□□□□ -2.35
Ush1gQ80T11 Gm25878-201ENSMUST00000104327 93 ntBASIC0.38□□□□□ -2.35
Ush1gQ80T11 Mir1933-201ENSMUST00000158930 88 ntBASIC0.38□□□□□ -2.35
Ush1gQ80T11 Gm22887-201ENSMUST00000178586 107 ntBASIC0.38□□□□□ -2.35
Ush1gQ80T11 Mir6350-201ENSMUST00000183639 105 ntBASIC0.38□□□□□ -2.35
Ush1gQ80T11 Gm28418-201ENSMUST00000186179 423 ntBASIC0.38□□□□□ -2.35
Ush1gQ80T11 Gm25138-201ENSMUST00000083248 136 ntBASIC0.38□□□□□ -2.35
Ush1gQ80T11 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Ush1gQ80T11 Gm14919-201ENSMUST00000120839 390 ntBASIC0.37□□□□□ -2.35
Ush1gQ80T11 Gm14671-201ENSMUST00000121790 262 ntBASIC0.37□□□□□ -2.35
Ush1gQ80T11 Snora20-201ENSMUST00000082703 128 ntBASIC0.37□□□□□ -2.35
Ush1gQ80T11 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Ush1gQ80T11 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.37□□□□□ -2.35
Ush1gQ80T11 Gm24171-201ENSMUST00000104126 131 ntBASIC0.36□□□□□ -2.35
Ush1gQ80T11 Gm22801-201ENSMUST00000175624 84 ntBASIC0.36□□□□□ -2.35
Ush1gQ80T11 Mir5624-201ENSMUST00000176635 61 ntBASIC0.36□□□□□ -2.35
Ush1gQ80T11 Gm43944-201ENSMUST00000205220 120 ntBASIC0.36□□□□□ -2.35
Ush1gQ80T11 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.36□□□□□ -2.35
Ush1gQ80T11 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.36□□□□□ -2.35
Ush1gQ80T11 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
Ush1gQ80T11 Gm15213-201ENSMUST00000122098 216 ntBASIC0.35□□□□□ -2.35
Ush1gQ80T11 Gm22387-201ENSMUST00000158191 131 ntBASIC0.35□□□□□ -2.35
Ush1gQ80T11 Gm22448-201ENSMUST00000179254 107 ntBASIC0.35□□□□□ -2.35
Ush1gQ80T11 Gm36189-201ENSMUST00000204113 523 ntBASIC0.35□□□□□ -2.35
Ush1gQ80T11 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.35□□□□□ -2.35
Ush1gQ80T11 Gm24316-201ENSMUST00000083041 107 ntBASIC0.35□□□□□ -2.35
Ush1gQ80T11 Gm45005-201ENSMUST00000206640 157 ntBASIC0.34□□□□□ -2.36
Ush1gQ80T11 Gm45673-201ENSMUST00000210293 358 ntBASIC0.34□□□□□ -2.36
Ush1gQ80T11 Gm45471-201ENSMUST00000211270 281 ntBASIC0.34□□□□□ -2.36
Ush1gQ80T11 Gm25142-201ENSMUST00000082698 107 ntBASIC0.34□□□□□ -2.36
Ush1gQ80T11 Snord69-201ENSMUST00000104024 80 ntBASIC0.33□□□□□ -2.36
Ush1gQ80T11 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.33□□□□□ -2.36
Ush1gQ80T11 Gm12771-201ENSMUST00000120246 135 ntBASIC0.33□□□□□ -2.36
Ush1gQ80T11 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.33□□□□□ -2.36
Ush1gQ80T11 Gm25393-201ENSMUST00000157336 285 ntBASIC0.33□□□□□ -2.36
Ush1gQ80T11 Gm23375-201ENSMUST00000175407 83 ntBASIC0.33□□□□□ -2.36
Ush1gQ80T11 Gm26326-201ENSMUST00000083070 129 ntBASIC0.33□□□□□ -2.36
Ush1gQ80T11 Gm25875-201ENSMUST00000104323 107 ntBASIC0.32□□□□□ -2.36
Ush1gQ80T11 Gm14039-201ENSMUST00000118705 101 ntBASIC0.32□□□□□ -2.36
Ush1gQ80T11 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Ush1gQ80T11 Gm22080-201ENSMUST00000157591 106 ntBASIC0.32□□□□□ -2.36
Ush1gQ80T11 Gm44464-201ENSMUST00000198010 138 ntBASIC0.32□□□□□ -2.36
Ush1gQ80T11 Gm44211-201ENSMUST00000204867 145 ntBASIC0.32□□□□□ -2.36
Ush1gQ80T11 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.32□□□□□ -2.36
Ush1gQ80T11 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.32□□□□□ -2.36
Ush1gQ80T11 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.31□□□□□ -2.36
Ush1gQ80T11 Gm13246-201ENSMUST00000120994 315 ntBASIC0.31□□□□□ -2.36
Ush1gQ80T11 Gm26482-201ENSMUST00000158015 62 ntBASIC0.31□□□□□ -2.36
Ush1gQ80T11 Gm22450-201ENSMUST00000179641 107 ntBASIC0.31□□□□□ -2.36
Ush1gQ80T11 Gm25473-201ENSMUST00000180191 107 ntBASIC0.31□□□□□ -2.36
Ush1gQ80T11 Mir7227-201ENSMUST00000200408 59 ntBASIC0.31□□□□□ -2.36
Ush1gQ80T11 Gm25814-201ENSMUST00000082754 107 ntBASIC0.31□□□□□ -2.36
Ush1gQ80T11 Gm24856-201ENSMUST00000082809 107 ntBASIC0.31□□□□□ -2.36
Ush1gQ80T11 Gm26497-201ENSMUST00000083146 107 ntBASIC0.31□□□□□ -2.36
Ush1gQ80T11 Gm26071-201ENSMUST00000083261 107 ntBASIC0.31□□□□□ -2.36
Ush1gQ80T11 Mir30a-201ENSMUST00000083471 71 ntBASIC0.31□□□□□ -2.36
Ush1gQ80T11 Gm24521-201ENSMUST00000083958 107 ntBASIC0.31□□□□□ -2.36
Ush1gQ80T11 Gm22048-201ENSMUST00000104721 89 ntBASIC0.3□□□□□ -2.36
Ush1gQ80T11 Gm15289-201ENSMUST00000117793 244 ntBASIC0.3□□□□□ -2.36
Ush1gQ80T11 Gm12837-201ENSMUST00000120131 373 ntBASIC0.3□□□□□ -2.36
Ush1gQ80T11 Gm25318-201ENSMUST00000122554 314 ntBASIC0.3□□□□□ -2.36
Ush1gQ80T11 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Ush1gQ80T11 Gm22586-201ENSMUST00000157507 122 ntBASIC0.3□□□□□ -2.36
Ush1gQ80T11 Gm22706-201ENSMUST00000157907 112 ntBASIC0.3□□□□□ -2.36
Ush1gQ80T11 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.3□□□□□ -2.36
Ush1gQ80T11 Gm15069-201ENSMUST00000117792 192 ntBASIC0.29□□□□□ -2.36
Ush1gQ80T11 Gm15068-201ENSMUST00000119796 192 ntBASIC0.29□□□□□ -2.36
Ush1gQ80T11 Gm24015-201ENSMUST00000157725 232 ntBASIC0.29□□□□□ -2.36
Ush1gQ80T11 Gm44563-201ENSMUST00000207958 178 ntBASIC0.29□□□□□ -2.36
Ush1gQ80T11 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.29□□□□□ -2.36
Ush1gQ80T11 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.29□□□□□ -2.36
Ush1gQ80T11 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.28□□□□□ -2.36
Ush1gQ80T11 Gm23838-201ENSMUST00000158067 162 ntBASIC0.28□□□□□ -2.36
Ush1gQ80T11 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.28□□□□□ -2.36
Ush1gQ80T11 Gm16307-201ENSMUST00000161269 210 ntBASIC0.28□□□□□ -2.36
Ush1gQ80T11 Gm25241-201ENSMUST00000174909 84 ntBASIC0.28□□□□□ -2.36
Ush1gQ80T11 Gm26217-201ENSMUST00000175212 84 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 157.9 ms