Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm23990-201ENSMUST00000117031 117 ntBASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Gm25599-201ENSMUST00000157816 103 ntBASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Gm23277-201ENSMUST00000157914 136 ntBASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Gm16546-201ENSMUST00000159442 355 ntBASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Gm22911-201ENSMUST00000177920 107 ntBASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Gm26097-201ENSMUST00000179642 93 ntBASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Gm18433-201ENSMUST00000192747 197 ntBASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Gm37116-201ENSMUST00000195161 147 ntBASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Gm24165-201ENSMUST00000082718 128 ntBASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Gm22738-201ENSMUST00000083440 147 ntBASIC1.6□□□□□ -2.15
Ubfd1Q78JW9 Gm24683-201ENSMUST00000104840 88 ntBASIC1.59□□□□□ -2.15
Ubfd1Q78JW9 Gm20391-201ENSMUST00000174722 106 ntBASIC1.59□□□□□ -2.15
Ubfd1Q78JW9 Gm23267-201ENSMUST00000178490 132 ntBASIC1.59□□□□□ -2.15
Ubfd1Q78JW9 Gm27928-201ENSMUST00000183747 256 ntBASIC1.59□□□□□ -2.15
Ubfd1Q78JW9 Gm24406-201ENSMUST00000083026 128 ntBASIC1.59□□□□□ -2.15
Ubfd1Q78JW9 Mir488-201ENSMUST00000093595 109 ntBASIC1.59□□□□□ -2.15
Ubfd1Q78JW9 Gm25068-201ENSMUST00000103895 110 ntBASIC1.58□□□□□ -2.16
Ubfd1Q78JW9 Gm25832-201ENSMUST00000104140 130 ntBASIC1.58□□□□□ -2.16
Ubfd1Q78JW9 Gm25541-201ENSMUST00000116888 126 ntBASIC1.58□□□□□ -2.16
Ubfd1Q78JW9 Gm22386-201ENSMUST00000158192 129 ntBASIC1.58□□□□□ -2.16
Ubfd1Q78JW9 Gm22612-201ENSMUST00000158293 101 ntBASIC1.58□□□□□ -2.16
Ubfd1Q78JW9 Gm24131-201ENSMUST00000158539 107 ntBASIC1.58□□□□□ -2.16
Ubfd1Q78JW9 Gm24106-201ENSMUST00000175498 127 ntBASIC1.58□□□□□ -2.16
Ubfd1Q78JW9 Mir21b-201ENSMUST00000184317 108 ntBASIC1.58□□□□□ -2.16
Ubfd1Q78JW9 Gm14882-201ENSMUST00000117216 218 ntBASIC1.57□□□□□ -2.16
Ubfd1Q78JW9 Gm26403-201ENSMUST00000158500 105 ntBASIC1.57□□□□□ -2.16
Ubfd1Q78JW9 Gm24222-201ENSMUST00000158834 93 ntBASIC1.57□□□□□ -2.16
Ubfd1Q78JW9 Gm25936-201ENSMUST00000179952 114 ntBASIC1.57□□□□□ -2.16
Ubfd1Q78JW9 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.57□□□□□ -2.16
Ubfd1Q78JW9 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Ubfd1Q78JW9 Gm25771-201ENSMUST00000158565 144 ntBASIC1.56□□□□□ -2.16
Ubfd1Q78JW9 Gm22348-201ENSMUST00000178674 79 ntBASIC1.56□□□□□ -2.16
Ubfd1Q78JW9 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.56□□□□□ -2.16
Ubfd1Q78JW9 Gm23299-201ENSMUST00000082708 79 ntBASIC1.56□□□□□ -2.16
Ubfd1Q78JW9 Snord1a-201ENSMUST00000083160 74 ntBASIC1.56□□□□□ -2.16
Ubfd1Q78JW9 Mir1298-201ENSMUST00000116681 98 ntBASIC1.55□□□□□ -2.16
Ubfd1Q78JW9 Gm13345-201ENSMUST00000121928 228 ntBASIC1.55□□□□□ -2.16
Ubfd1Q78JW9 Gm26038-201ENSMUST00000158151 106 ntBASIC1.55□□□□□ -2.16
Ubfd1Q78JW9 Gm22946-201ENSMUST00000158558 82 ntBASIC1.55□□□□□ -2.16
Ubfd1Q78JW9 Gm23419-201ENSMUST00000175523 84 ntBASIC1.55□□□□□ -2.16
Ubfd1Q78JW9 Gm23714-201ENSMUST00000179259 105 ntBASIC1.55□□□□□ -2.16
Ubfd1Q78JW9 Mir320-201ENSMUST00000083594 82 ntBASIC1.55□□□□□ -2.16
Ubfd1Q78JW9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.55□□□□□ -2.16
Ubfd1Q78JW9 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Ubfd1Q78JW9 Gm23772-201ENSMUST00000104433 102 ntBASIC1.54□□□□□ -2.16
Ubfd1Q78JW9 Gm25716-201ENSMUST00000158628 104 ntBASIC1.54□□□□□ -2.16
Ubfd1Q78JW9 Gm23567-201ENSMUST00000178005 107 ntBASIC1.54□□□□□ -2.16
Ubfd1Q78JW9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.54□□□□□ -2.16
Ubfd1Q78JW9 Gm42623-201ENSMUST00000197225 379 ntBASIC1.54□□□□□ -2.16
Ubfd1Q78JW9 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.54□□□□□ -2.16
Ubfd1Q78JW9 Snora20-201ENSMUST00000082703 128 ntBASIC1.54□□□□□ -2.16
Ubfd1Q78JW9 Gm22704-201ENSMUST00000083027 137 ntBASIC1.54□□□□□ -2.16
Ubfd1Q78JW9 Gm23080-201ENSMUST00000157846 103 ntBASIC1.53□□□□□ -2.16
Ubfd1Q78JW9 Gm22929-201ENSMUST00000175517 107 ntBASIC1.53□□□□□ -2.16
Ubfd1Q78JW9 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.53□□□□□ -2.16
Ubfd1Q78JW9 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.52□□□□□ -2.17
Ubfd1Q78JW9 Mir653-201ENSMUST00000102402 85 ntBASIC1.52□□□□□ -2.17
Ubfd1Q78JW9 Gm22603-201ENSMUST00000157603 96 ntBASIC1.52□□□□□ -2.17
Ubfd1Q78JW9 Gm25364-201ENSMUST00000158851 107 ntBASIC1.52□□□□□ -2.17
Ubfd1Q78JW9 Gm25949-201ENSMUST00000175333 114 ntBASIC1.52□□□□□ -2.17
Ubfd1Q78JW9 Mir7241-201ENSMUST00000184532 64 ntBASIC1.52□□□□□ -2.17
Ubfd1Q78JW9 Gm45471-201ENSMUST00000211270 281 ntBASIC1.52□□□□□ -2.17
Ubfd1Q78JW9 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Ubfd1Q78JW9 Gm23106-201ENSMUST00000157554 101 ntBASIC1.51□□□□□ -2.17
Ubfd1Q78JW9 Gm25882-201ENSMUST00000157784 85 ntBASIC1.51□□□□□ -2.17
Ubfd1Q78JW9 Gm26090-201ENSMUST00000157897 128 ntBASIC1.51□□□□□ -2.17
Ubfd1Q78JW9 Gm24902-201ENSMUST00000158126 123 ntBASIC1.51□□□□□ -2.17
Ubfd1Q78JW9 Gm22164-201ENSMUST00000158413 106 ntBASIC1.51□□□□□ -2.17
Ubfd1Q78JW9 Mir1966-201ENSMUST00000158807 108 ntBASIC1.51□□□□□ -2.17
Ubfd1Q78JW9 Mir7039-201ENSMUST00000183852 85 ntBASIC1.51□□□□□ -2.17
Ubfd1Q78JW9 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.51□□□□□ -2.17
Ubfd1Q78JW9 BC022960-201ENSMUST00000119987 1815 ntBASIC1.51□□□□□ -2.17
Ubfd1Q78JW9 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ubfd1Q78JW9 Gm26080-201ENSMUST00000104069 131 ntBASIC1.5□□□□□ -2.17
Ubfd1Q78JW9 Gm22149-201ENSMUST00000104442 136 ntBASIC1.5□□□□□ -2.17
Ubfd1Q78JW9 Gm22790-201ENSMUST00000157229 129 ntBASIC1.5□□□□□ -2.17
Ubfd1Q78JW9 Gm27934-201ENSMUST00000158795 63 ntBASIC1.5□□□□□ -2.17
Ubfd1Q78JW9 Gm25831-201ENSMUST00000158924 163 ntBASIC1.5□□□□□ -2.17
Ubfd1Q78JW9 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.5□□□□□ -2.17
Ubfd1Q78JW9 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.5□□□□□ -2.17
Ubfd1Q78JW9 Gm25588-201ENSMUST00000082501 140 ntBASIC1.5□□□□□ -2.17
Ubfd1Q78JW9 Gm26326-201ENSMUST00000083070 129 ntBASIC1.5□□□□□ -2.17
Ubfd1Q78JW9 Mir451a-201ENSMUST00000093557 72 ntBASIC1.5□□□□□ -2.17
Ubfd1Q78JW9 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.5□□□□□ -2.17
Ubfd1Q78JW9 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ubfd1Q78JW9 Mir654-201ENSMUST00000104787 84 ntBASIC1.49□□□□□ -2.17
Ubfd1Q78JW9 Gm22967-201ENSMUST00000157956 239 ntBASIC1.49□□□□□ -2.17
Ubfd1Q78JW9 Gm25958-201ENSMUST00000175114 71 ntBASIC1.49□□□□□ -2.17
Ubfd1Q78JW9 Mir201-201ENSMUST00000083470 66 ntBASIC1.49□□□□□ -2.17
Ubfd1Q78JW9 Gm24494-201ENSMUST00000083804 81 ntBASIC1.49□□□□□ -2.17
Ubfd1Q78JW9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Ubfd1Q78JW9 Gm14923-201ENSMUST00000118270 155 ntBASIC1.48□□□□□ -2.17
Ubfd1Q78JW9 Gm22139-201ENSMUST00000158747 105 ntBASIC1.48□□□□□ -2.17
Ubfd1Q78JW9 Gm23967-201ENSMUST00000175062 78 ntBASIC1.48□□□□□ -2.17
Ubfd1Q78JW9 Gm22699-201ENSMUST00000175376 105 ntBASIC1.48□□□□□ -2.17
Ubfd1Q78JW9 Gm22802-201ENSMUST00000175621 89 ntBASIC1.48□□□□□ -2.17
Ubfd1Q78JW9 Mir6351-201ENSMUST00000183826 99 ntBASIC1.48□□□□□ -2.17
Ubfd1Q78JW9 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.48□□□□□ -2.17
Ubfd1Q78JW9 Gm42988-201ENSMUST00000198116 225 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms