Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm22163-201ENSMUST00000158408 135 ntBASIC1.41□□□□□ -2.18
Smarca1Q6PGB8 Gm28862-201ENSMUST00000188246 163 ntBASIC1.41□□□□□ -2.18
Smarca1Q6PGB8 Gm44483-201ENSMUST00000197203 97 ntBASIC1.41□□□□□ -2.18
Smarca1Q6PGB8 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.41□□□□□ -2.18
Smarca1Q6PGB8 Mir211-201ENSMUST00000083651 106 ntBASIC1.41□□□□□ -2.18
Smarca1Q6PGB8 Gm25895-201ENSMUST00000083714 100 ntBASIC1.41□□□□□ -2.18
Smarca1Q6PGB8 Gm25409-201ENSMUST00000083764 131 ntBASIC1.41□□□□□ -2.18
Smarca1Q6PGB8 Gm14671-201ENSMUST00000121790 262 ntBASIC1.4□□□□□ -2.19
Smarca1Q6PGB8 Gm25323-201ENSMUST00000122555 103 ntBASIC1.4□□□□□ -2.19
Smarca1Q6PGB8 Gm26415-201ENSMUST00000157673 292 ntBASIC1.4□□□□□ -2.19
Smarca1Q6PGB8 Gm25494-201ENSMUST00000158143 100 ntBASIC1.4□□□□□ -2.19
Smarca1Q6PGB8 Gm22387-201ENSMUST00000158191 131 ntBASIC1.4□□□□□ -2.19
Smarca1Q6PGB8 Gm23258-201ENSMUST00000158319 106 ntBASIC1.4□□□□□ -2.19
Smarca1Q6PGB8 Gm23636-201ENSMUST00000175070 95 ntBASIC1.4□□□□□ -2.19
Smarca1Q6PGB8 Gm25949-201ENSMUST00000175333 114 ntBASIC1.4□□□□□ -2.19
Smarca1Q6PGB8 Gm22283-201ENSMUST00000082556 161 ntBASIC1.4□□□□□ -2.19
Smarca1Q6PGB8 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Smarca1Q6PGB8 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.39□□□□□ -2.19
Smarca1Q6PGB8 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.39□□□□□ -2.19
Smarca1Q6PGB8 Gm24865-201ENSMUST00000103246 96 ntBASIC1.39□□□□□ -2.19
Smarca1Q6PGB8 Gm26293-201ENSMUST00000104170 84 ntBASIC1.39□□□□□ -2.19
Smarca1Q6PGB8 Mir654-201ENSMUST00000104787 84 ntBASIC1.39□□□□□ -2.19
Smarca1Q6PGB8 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.39□□□□□ -2.19
Smarca1Q6PGB8 Gm24729-201ENSMUST00000158225 137 ntBASIC1.39□□□□□ -2.19
Smarca1Q6PGB8 Gm27656-201ENSMUST00000185055 80 ntBASIC1.39□□□□□ -2.19
Smarca1Q6PGB8 Gm23245-201ENSMUST00000083370 135 ntBASIC1.39□□□□□ -2.19
Smarca1Q6PGB8 Gm24762-201ENSMUST00000083689 104 ntBASIC1.39□□□□□ -2.19
Smarca1Q6PGB8 Gm24252-201ENSMUST00000083700 132 ntBASIC1.39□□□□□ -2.19
Smarca1Q6PGB8 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Smarca1Q6PGB8 Gm14838-201ENSMUST00000118913 248 ntBASIC1.38□□□□□ -2.19
Smarca1Q6PGB8 Gm22559-201ENSMUST00000157329 134 ntBASIC1.38□□□□□ -2.19
Smarca1Q6PGB8 Gm25390-201ENSMUST00000157341 103 ntBASIC1.38□□□□□ -2.19
Smarca1Q6PGB8 Gm22663-201ENSMUST00000158721 102 ntBASIC1.38□□□□□ -2.19
Smarca1Q6PGB8 Gm26073-201ENSMUST00000179906 127 ntBASIC1.38□□□□□ -2.19
Smarca1Q6PGB8 Gm44358-201ENSMUST00000196301 98 ntBASIC1.38□□□□□ -2.19
Smarca1Q6PGB8 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Smarca1Q6PGB8 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Smarca1Q6PGB8 Gm25828-201ENSMUST00000157087 95 ntBASIC1.37□□□□□ -2.19
Smarca1Q6PGB8 Gm22485-201ENSMUST00000157990 109 ntBASIC1.37□□□□□ -2.19
Smarca1Q6PGB8 Gm24808-201ENSMUST00000157993 118 ntBASIC1.37□□□□□ -2.19
Smarca1Q6PGB8 Gm26029-201ENSMUST00000158659 132 ntBASIC1.37□□□□□ -2.19
Smarca1Q6PGB8 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.37□□□□□ -2.19
Smarca1Q6PGB8 Gm44464-201ENSMUST00000198010 138 ntBASIC1.37□□□□□ -2.19
Smarca1Q6PGB8 Gm26224-201ENSMUST00000082506 80 ntBASIC1.37□□□□□ -2.19
Smarca1Q6PGB8 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.37□□□□□ -2.19
Smarca1Q6PGB8 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.36□□□□□ -2.19
Smarca1Q6PGB8 Mir466p-201ENSMUST00000103925 89 ntBASIC1.36□□□□□ -2.19
Smarca1Q6PGB8 Gm27711-201ENSMUST00000183802 118 ntBASIC1.36□□□□□ -2.19
Smarca1Q6PGB8 Gm27420-201ENSMUST00000183823 79 ntBASIC1.36□□□□□ -2.19
Smarca1Q6PGB8 Mir7063-201ENSMUST00000184158 91 ntBASIC1.36□□□□□ -2.19
Smarca1Q6PGB8 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.36□□□□□ -2.19
Smarca1Q6PGB8 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Smarca1Q6PGB8 Snord71-201ENSMUST00000104361 85 ntBASIC1.35□□□□□ -2.19
Smarca1Q6PGB8 Gm14568-201ENSMUST00000119321 294 ntBASIC1.35□□□□□ -2.19
Smarca1Q6PGB8 Gm23901-201ENSMUST00000157570 107 ntBASIC1.35□□□□□ -2.19
Smarca1Q6PGB8 Gm25838-201ENSMUST00000158920 120 ntBASIC1.35□□□□□ -2.19
Smarca1Q6PGB8 Gm44490-201ENSMUST00000198566 127 ntBASIC1.35□□□□□ -2.19
Smarca1Q6PGB8 Gm25128-201ENSMUST00000083339 76 ntBASIC1.35□□□□□ -2.19
Smarca1Q6PGB8 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.35□□□□□ -2.19
Smarca1Q6PGB8 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Smarca1Q6PGB8 Gm22944-201ENSMUST00000158662 133 ntBASIC1.34□□□□□ -2.19
Smarca1Q6PGB8 Gm25834-201ENSMUST00000158916 101 ntBASIC1.34□□□□□ -2.19
Smarca1Q6PGB8 Gm23340-201ENSMUST00000158955 123 ntBASIC1.34□□□□□ -2.19
Smarca1Q6PGB8 Mir1954-201ENSMUST00000175595 86 ntBASIC1.34□□□□□ -2.19
Smarca1Q6PGB8 Gm18188-201ENSMUST00000219386 478 ntBASIC1.34□□□□□ -2.19
Smarca1Q6PGB8 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Gm13922-201ENSMUST00000119505 156 ntBASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Gm24559-201ENSMUST00000157519 121 ntBASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Gm22200-201ENSMUST00000158614 67 ntBASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Gm26160-201ENSMUST00000158965 63 ntBASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Gm25464-201ENSMUST00000175481 107 ntBASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Mir6394-201ENSMUST00000184738 99 ntBASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Gm19790-201ENSMUST00000214414 251 ntBASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Snora20-201ENSMUST00000082703 128 ntBASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Snord82-201ENSMUST00000082889 70 ntBASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Mir196b-201ENSMUST00000083509 85 ntBASIC1.33□□□□□ -2.2
Smarca1Q6PGB8 Gm25768-201ENSMUST00000158570 98 ntBASIC1.32□□□□□ -2.2
Smarca1Q6PGB8 Gm25482-201ENSMUST00000083225 107 ntBASIC1.32□□□□□ -2.2
Smarca1Q6PGB8 Mir451a-201ENSMUST00000093557 72 ntBASIC1.32□□□□□ -2.2
Smarca1Q6PGB8 Gm24640-201ENSMUST00000116949 126 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm22626-201ENSMUST00000116990 126 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm22233-201ENSMUST00000157464 114 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm25868-201ENSMUST00000158253 114 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm23114-201ENSMUST00000158478 117 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Snora24-201ENSMUST00000174989 130 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm26426-201ENSMUST00000177866 123 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm24761-201ENSMUST00000179589 127 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm24488-201ENSMUST00000179934 127 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm25701-201ENSMUST00000179988 127 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm26060-201ENSMUST00000180094 123 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm26431-201ENSMUST00000180199 127 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm27365-201ENSMUST00000184041 177 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm38364-201ENSMUST00000191814 179 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.31□□□□□ -2.2
Smarca1Q6PGB8 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Smarca1Q6PGB8 Gm26468-201ENSMUST00000158644 106 ntBASIC1.3□□□□□ -2.2
Smarca1Q6PGB8 Gm24880-201ENSMUST00000158776 85 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 158 ms