Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm20734-201ENSMUST00000216939 193 ntBASIC1.66□□□□□ -2.14
Ift88Q61371 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ift88Q61371 Gm24895-201ENSMUST00000122742 74 ntBASIC1.65□□□□□ -2.15
Ift88Q61371 Gm22139-201ENSMUST00000158747 105 ntBASIC1.65□□□□□ -2.15
Ift88Q61371 Gm24677-201ENSMUST00000158755 150 ntBASIC1.65□□□□□ -2.15
Ift88Q61371 Gm17020-201ENSMUST00000172274 274 ntBASIC1.65□□□□□ -2.15
Ift88Q61371 Gm27265-201ENSMUST00000183559 77 ntBASIC1.65□□□□□ -2.15
Ift88Q61371 Gm18433-201ENSMUST00000192747 197 ntBASIC1.65□□□□□ -2.15
Ift88Q61371 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.65□□□□□ -2.15
Ift88Q61371 Gm25588-201ENSMUST00000082501 140 ntBASIC1.65□□□□□ -2.15
Ift88Q61371 Mir148b-201ENSMUST00000083626 97 ntBASIC1.65□□□□□ -2.15
Ift88Q61371 Gm22761-201ENSMUST00000102278 96 ntBASIC1.64□□□□□ -2.15
Ift88Q61371 Mir758-201ENSMUST00000103260 81 ntBASIC1.64□□□□□ -2.15
Ift88Q61371 Gm26018-201ENSMUST00000104406 128 ntBASIC1.64□□□□□ -2.15
Ift88Q61371 Mir873a-201ENSMUST00000104863 77 ntBASIC1.64□□□□□ -2.15
Ift88Q61371 Gm26049-201ENSMUST00000157313 108 ntBASIC1.64□□□□□ -2.15
Ift88Q61371 Gm22336-201ENSMUST00000157719 107 ntBASIC1.64□□□□□ -2.15
Ift88Q61371 Gm24054-201ENSMUST00000158619 105 ntBASIC1.64□□□□□ -2.15
Ift88Q61371 Mir201-201ENSMUST00000083470 66 ntBASIC1.64□□□□□ -2.15
Ift88Q61371 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.64□□□□□ -2.15
Ift88Q61371 Gm23221-201ENSMUST00000158118 93 ntBASIC1.63□□□□□ -2.15
Ift88Q61371 Gm17528-201ENSMUST00000171026 239 ntBASIC1.63□□□□□ -2.15
Ift88Q61371 Mir7226-201ENSMUST00000184953 60 ntBASIC1.63□□□□□ -2.15
Ift88Q61371 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Ift88Q61371 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.63□□□□□ -2.15
Ift88Q61371 Snora20-201ENSMUST00000082703 128 ntBASIC1.63□□□□□ -2.15
Ift88Q61371 Gm26326-201ENSMUST00000083070 129 ntBASIC1.63□□□□□ -2.15
Ift88Q61371 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.63□□□□□ -2.15
Ift88Q61371 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.63□□□□□ -2.15
Ift88Q61371 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Ift88Q61371 Gm22099-201ENSMUST00000157925 123 ntBASIC1.62□□□□□ -2.15
Ift88Q61371 Gm27934-201ENSMUST00000158795 63 ntBASIC1.62□□□□□ -2.15
Ift88Q61371 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.62□□□□□ -2.15
Ift88Q61371 Gm26922-201ENSMUST00000082687 72 ntBASIC1.62□□□□□ -2.15
Ift88Q61371 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.62□□□□□ -2.15
Ift88Q61371 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Ift88Q61371 Gm24262-201ENSMUST00000157431 144 ntBASIC1.61□□□□□ -2.15
Ift88Q61371 Gm26412-201ENSMUST00000157666 55 ntBASIC1.61□□□□□ -2.15
Ift88Q61371 Gm23558-201ENSMUST00000157823 80 ntBASIC1.61□□□□□ -2.15
Ift88Q61371 Gm7258-201ENSMUST00000179317 300 ntBASIC1.61□□□□□ -2.15
Ift88Q61371 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Ift88Q61371 Gm44976-201ENSMUST00000205543 261 ntBASIC1.61□□□□□ -2.15
Ift88Q61371 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.61□□□□□ -2.15
Ift88Q61371 Gm23299-201ENSMUST00000082708 79 ntBASIC1.61□□□□□ -2.15
Ift88Q61371 Gm25136-201ENSMUST00000083253 115 ntBASIC1.61□□□□□ -2.15
Ift88Q61371 Mir320-201ENSMUST00000083594 82 ntBASIC1.61□□□□□ -2.15
Ift88Q61371 Mir451a-201ENSMUST00000093557 72 ntBASIC1.61□□□□□ -2.15
Ift88Q61371 Gm23951-201ENSMUST00000104029 132 ntBASIC1.6□□□□□ -2.15
Ift88Q61371 Gm22373-201ENSMUST00000104584 89 ntBASIC1.6□□□□□ -2.15
Ift88Q61371 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.6□□□□□ -2.15
Ift88Q61371 Gm8219-201ENSMUST00000218309 242 ntBASIC1.6□□□□□ -2.15
Ift88Q61371 Gm25081-201ENSMUST00000082534 108 ntBASIC1.6□□□□□ -2.15
Ift88Q61371 Snord1a-201ENSMUST00000083160 74 ntBASIC1.6□□□□□ -2.15
Ift88Q61371 Gm23011-201ENSMUST00000104148 132 ntBASIC1.59□□□□□ -2.15
Ift88Q61371 Gm24232-201ENSMUST00000104314 132 ntBASIC1.59□□□□□ -2.15
Ift88Q61371 Gm25541-201ENSMUST00000116888 126 ntBASIC1.59□□□□□ -2.15
Ift88Q61371 Gm22842-201ENSMUST00000157709 118 ntBASIC1.59□□□□□ -2.15
Ift88Q61371 Gm26090-201ENSMUST00000157897 128 ntBASIC1.59□□□□□ -2.15
Ift88Q61371 Gm23337-201ENSMUST00000158959 118 ntBASIC1.59□□□□□ -2.15
Ift88Q61371 Gm25936-201ENSMUST00000179952 114 ntBASIC1.59□□□□□ -2.15
Ift88Q61371 Mir7017-201ENSMUST00000184894 62 ntBASIC1.59□□□□□ -2.15
Ift88Q61371 Gm25068-201ENSMUST00000103895 110 ntBASIC1.58□□□□□ -2.16
Ift88Q61371 Gm23320-201ENSMUST00000104462 127 ntBASIC1.58□□□□□ -2.16
Ift88Q61371 Mir654-201ENSMUST00000104787 84 ntBASIC1.58□□□□□ -2.16
Ift88Q61371 Gm22803-201ENSMUST00000158049 283 ntBASIC1.58□□□□□ -2.16
Ift88Q61371 Gm25364-201ENSMUST00000158851 107 ntBASIC1.58□□□□□ -2.16
Ift88Q61371 Gm25949-201ENSMUST00000175333 114 ntBASIC1.58□□□□□ -2.16
Ift88Q61371 Gm23419-201ENSMUST00000175523 84 ntBASIC1.58□□□□□ -2.16
Ift88Q61371 Gm18213-201ENSMUST00000207850 178 ntBASIC1.58□□□□□ -2.16
Ift88Q61371 Gm45471-201ENSMUST00000211270 281 ntBASIC1.58□□□□□ -2.16
Ift88Q61371 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.58□□□□□ -2.16
Ift88Q61371 Gm22723-201ENSMUST00000083820 129 ntBASIC1.58□□□□□ -2.16
Ift88Q61371 Gm23950-201ENSMUST00000104026 129 ntBASIC1.57□□□□□ -2.16
Ift88Q61371 Gm25980-201ENSMUST00000157176 218 ntBASIC1.57□□□□□ -2.16
Ift88Q61371 Gm22929-201ENSMUST00000175517 107 ntBASIC1.57□□□□□ -2.16
Ift88Q61371 Mir6406-201ENSMUST00000183592 120 ntBASIC1.57□□□□□ -2.16
Ift88Q61371 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Ift88Q61371 Gm18502-201ENSMUST00000218679 199 ntBASIC1.57□□□□□ -2.16
Ift88Q61371 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.57□□□□□ -2.16
Ift88Q61371 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.57□□□□□ -2.16
Ift88Q61371 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.57□□□□□ -2.16
Ift88Q61371 Mir489-201ENSMUST00000093599 107 ntBASIC1.57□□□□□ -2.16
Ift88Q61371 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Ift88Q61371 Gm26038-201ENSMUST00000158151 106 ntBASIC1.56□□□□□ -2.16
Ift88Q61371 Mir7241-201ENSMUST00000184532 64 ntBASIC1.56□□□□□ -2.16
Ift88Q61371 Gm43381-201ENSMUST00000198553 165 ntBASIC1.56□□□□□ -2.16
Ift88Q61371 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Ift88Q61371 Snord61-201ENSMUST00000083176 71 ntBASIC1.56□□□□□ -2.16
Ift88Q61371 BC022960-201ENSMUST00000119987 1815 ntBASIC1.56□□□□□ -2.16
Ift88Q61371 Gm25992-201ENSMUST00000102437 109 ntBASIC1.55□□□□□ -2.16
Ift88Q61371 Gm23106-201ENSMUST00000157554 101 ntBASIC1.55□□□□□ -2.16
Ift88Q61371 Gm22164-201ENSMUST00000158413 106 ntBASIC1.55□□□□□ -2.16
Ift88Q61371 Gm24001-201ENSMUST00000158463 85 ntBASIC1.55□□□□□ -2.16
Ift88Q61371 Mir7009-201ENSMUST00000184519 64 ntBASIC1.55□□□□□ -2.16
Ift88Q61371 Gm44358-201ENSMUST00000196301 98 ntBASIC1.55□□□□□ -2.16
Ift88Q61371 Gm43512-201ENSMUST00000198495 176 ntBASIC1.55□□□□□ -2.16
Ift88Q61371 Gm22576-201ENSMUST00000083733 104 ntBASIC1.55□□□□□ -2.16
Ift88Q61371 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Ift88Q61371 Gm14923-201ENSMUST00000118270 155 ntBASIC1.54□□□□□ -2.16
Ift88Q61371 Gm25769-201ENSMUST00000158569 127 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms