Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CtcfQ61164 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.86□□□□□ -2.11
CtcfQ61164 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CtcfQ61164 Gm26082-201ENSMUST00000104070 127 ntBASIC1.85□□□□□ -2.11
CtcfQ61164 Gm24632-201ENSMUST00000122770 323 ntBASIC1.85□□□□□ -2.11
CtcfQ61164 Gm24141-201ENSMUST00000122776 115 ntBASIC1.85□□□□□ -2.11
CtcfQ61164 Gm25882-201ENSMUST00000157784 85 ntBASIC1.85□□□□□ -2.11
CtcfQ61164 Mir6350-201ENSMUST00000183639 105 ntBASIC1.85□□□□□ -2.11
CtcfQ61164 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.85□□□□□ -2.11
CtcfQ61164 Gm24410-201ENSMUST00000083433 107 ntBASIC1.85□□□□□ -2.11
CtcfQ61164 Gm24449-201ENSMUST00000083985 106 ntBASIC1.85□□□□□ -2.11
CtcfQ61164 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CtcfQ61164 Gm25274-201ENSMUST00000104296 135 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Snord90-201ENSMUST00000104568 111 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm23109-201ENSMUST00000116867 126 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm25828-201ENSMUST00000157087 95 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm23044-201ENSMUST00000157891 100 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm24394-201ENSMUST00000158141 123 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm24634-201ENSMUST00000158672 107 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm22775-201ENSMUST00000177630 120 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm23569-201ENSMUST00000180120 120 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm38364-201ENSMUST00000191814 179 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm44481-201ENSMUST00000197288 84 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm44339-201ENSMUST00000200598 84 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm44921-201ENSMUST00000205290 301 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm45492-201ENSMUST00000211611 288 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm24461-201ENSMUST00000082735 103 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm24705-201ENSMUST00000082808 107 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Gm24616-201ENSMUST00000083274 139 ntBASIC1.84□□□□□ -2.11
CtcfQ61164 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CtcfQ61164 Mir669n-201ENSMUST00000158636 54 ntBASIC1.83□□□□□ -2.12
CtcfQ61164 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.83□□□□□ -2.12
CtcfQ61164 Gm27326-201ENSMUST00000183504 95 ntBASIC1.83□□□□□ -2.12
CtcfQ61164 Mir7678-201ENSMUST00000185076 71 ntBASIC1.83□□□□□ -2.12
CtcfQ61164 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.83□□□□□ -2.12
CtcfQ61164 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.83□□□□□ -2.12
CtcfQ61164 Gm23138-201ENSMUST00000083365 103 ntBASIC1.83□□□□□ -2.12
CtcfQ61164 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Mir758-201ENSMUST00000103260 81 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Gm24342-201ENSMUST00000103907 104 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Gm24375-201ENSMUST00000104397 132 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Gm24717-201ENSMUST00000157522 124 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Mir3968-201ENSMUST00000175355 100 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Gm24572-201ENSMUST00000175505 88 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Gm29613-201ENSMUST00000185846 313 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Gm37545-201ENSMUST00000186512 148 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Gm29544-201ENSMUST00000188860 313 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Gm28808-201ENSMUST00000190978 313 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CtcfQ61164 Gm37116-201ENSMUST00000195161 147 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.82□□□□□ -2.12
CtcfQ61164 Gm24148-201ENSMUST00000082762 80 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Gm24805-201ENSMUST00000082931 104 ntBASIC1.82□□□□□ -2.12
CtcfQ61164 Gm15115-201ENSMUST00000121145 264 ntBASIC1.81□□□□□ -2.12
CtcfQ61164 Gm25323-201ENSMUST00000122555 103 ntBASIC1.81□□□□□ -2.12
CtcfQ61164 Gm23260-201ENSMUST00000158317 172 ntBASIC1.81□□□□□ -2.12
CtcfQ61164 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.81□□□□□ -2.12
CtcfQ61164 Snord61-201ENSMUST00000083176 71 ntBASIC1.81□□□□□ -2.12
CtcfQ61164 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.81□□□□□ -2.12
CtcfQ61164 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
CtcfQ61164 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CtcfQ61164 Gm22966-201ENSMUST00000157957 129 ntBASIC1.8□□□□□ -2.12
CtcfQ61164 Gm24668-201ENSMUST00000158935 104 ntBASIC1.8□□□□□ -2.12
CtcfQ61164 Mir7021-201ENSMUST00000197026 63 ntBASIC1.8□□□□□ -2.12
CtcfQ61164 Mir3969-201ENSMUST00000197106 92 ntBASIC1.8□□□□□ -2.12
CtcfQ61164 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.79□□□□□ -2.12
CtcfQ61164 Gm24232-201ENSMUST00000104314 132 ntBASIC1.79□□□□□ -2.12
CtcfQ61164 Gm14937-201ENSMUST00000119709 208 ntBASIC1.79□□□□□ -2.12
CtcfQ61164 Gm25060-201ENSMUST00000157374 130 ntBASIC1.79□□□□□ -2.12
CtcfQ61164 Gm44384-201ENSMUST00000200208 114 ntBASIC1.79□□□□□ -2.12
CtcfQ61164 Gm44057-201ENSMUST00000204547 96 ntBASIC1.79□□□□□ -2.12
CtcfQ61164 Gm22681-201ENSMUST00000083853 106 ntBASIC1.79□□□□□ -2.12
CtcfQ61164 Gm26339-201ENSMUST00000102368 99 ntBASIC1.78□□□□□ -2.12
CtcfQ61164 Gm22105-201ENSMUST00000116734 116 ntBASIC1.78□□□□□ -2.12
CtcfQ61164 Gm22603-201ENSMUST00000157603 96 ntBASIC1.78□□□□□ -2.12
CtcfQ61164 Gm26181-201ENSMUST00000157687 106 ntBASIC1.78□□□□□ -2.12
CtcfQ61164 Mir6351-201ENSMUST00000183826 99 ntBASIC1.78□□□□□ -2.12
CtcfQ61164 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.78□□□□□ -2.12
CtcfQ61164 Gm25797-201ENSMUST00000082640 107 ntBASIC1.78□□□□□ -2.12
CtcfQ61164 Gm23445-201ENSMUST00000082800 107 ntBASIC1.78□□□□□ -2.12
CtcfQ61164 Mir201-201ENSMUST00000083470 66 ntBASIC1.78□□□□□ -2.12
CtcfQ61164 Mir344-201ENSMUST00000083634 95 ntBASIC1.78□□□□□ -2.12
CtcfQ61164 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.78□□□□□ -2.12
CtcfQ61164 Gm26080-201ENSMUST00000104069 131 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Snord100-201ENSMUST00000116836 74 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Gm12432-201ENSMUST00000119540 186 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Gm22279-201ENSMUST00000157200 93 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Gm23390-201ENSMUST00000157393 106 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Gm25371-201ENSMUST00000158162 101 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Gm23113-201ENSMUST00000158477 99 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Gm22946-201ENSMUST00000158558 82 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Gm27934-201ENSMUST00000158795 63 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Gm24174-201ENSMUST00000158933 111 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Mir7241-201ENSMUST00000184532 64 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Mir6394-201ENSMUST00000184738 99 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Gm42719-201ENSMUST00000197393 355 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Gm44976-201ENSMUST00000205543 261 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Gm22738-201ENSMUST00000083440 147 ntBASIC1.77□□□□□ -2.13
CtcfQ61164 Gm22790-201ENSMUST00000157229 129 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms