Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Mir362-201ENSMUST00000093592 65 ntBASIC0.62□□□□□ -2.31
Usf1Q61069 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Usf1Q61069 Gm16265-201ENSMUST00000134558 108 ntBASIC0.61□□□□□ -2.31
Usf1Q61069 Gm24392-201ENSMUST00000158136 103 ntBASIC0.61□□□□□ -2.31
Usf1Q61069 Gm24667-201ENSMUST00000158938 103 ntBASIC0.61□□□□□ -2.31
Usf1Q61069 Gm16539-201ENSMUST00000160086 327 ntBASIC0.61□□□□□ -2.31
Usf1Q61069 Mir6951-201ENSMUST00000183910 75 ntBASIC0.61□□□□□ -2.31
Usf1Q61069 Gm44563-201ENSMUST00000207958 178 ntBASIC0.61□□□□□ -2.31
Usf1Q61069 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.61□□□□□ -2.31
Usf1Q61069 Gm24764-201ENSMUST00000083686 199 ntBASIC0.61□□□□□ -2.31
Usf1Q61069 Mir451a-201ENSMUST00000093557 72 ntBASIC0.61□□□□□ -2.31
Usf1Q61069 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.61□□□□□ -2.31
Usf1Q61069 Gm26421-201ENSMUST00000104279 132 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Gm14671-201ENSMUST00000121790 262 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Gm25424-201ENSMUST00000157612 58 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Gm26415-201ENSMUST00000157673 292 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Mir669a-7-201ENSMUST00000180364 87 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Usf1Q61069 Mir669a-6-201ENSMUST00000196127 87 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Mir669a-12-201ENSMUST00000197274 87 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Mir669a-5-201ENSMUST00000197439 87 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Mir669a-10-201ENSMUST00000197745 87 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Mir669a-11-201ENSMUST00000197952 87 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Mir669a-4-201ENSMUST00000198665 87 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Mir669a-9-201ENSMUST00000200087 87 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Mir669a-8-201ENSMUST00000200268 87 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Gm45471-201ENSMUST00000211270 281 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Usf1Q61069 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.6□□□□□ -2.31
Usf1Q61069 Gm24423-201ENSMUST00000101982 106 ntBASIC0.59□□□□□ -2.31
Usf1Q61069 Gm24171-201ENSMUST00000104126 131 ntBASIC0.59□□□□□ -2.31
Usf1Q61069 Gm25878-201ENSMUST00000104327 93 ntBASIC0.59□□□□□ -2.31
Usf1Q61069 Gm12797-201ENSMUST00000118645 273 ntBASIC0.59□□□□□ -2.31
Usf1Q61069 Gm23214-201ENSMUST00000122716 157 ntBASIC0.59□□□□□ -2.31
Usf1Q61069 Gm23605-201ENSMUST00000157255 127 ntBASIC0.59□□□□□ -2.31
Usf1Q61069 Gm26482-201ENSMUST00000158015 62 ntBASIC0.59□□□□□ -2.31
Usf1Q61069 Gm22163-201ENSMUST00000158408 135 ntBASIC0.59□□□□□ -2.31
Usf1Q61069 Mir3079-201ENSMUST00000175428 90 ntBASIC0.59□□□□□ -2.31
Usf1Q61069 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.59□□□□□ -2.31
Usf1Q61069 Gm44977-201ENSMUST00000205283 420 ntBASIC0.59□□□□□ -2.31
Usf1Q61069 Snora20-201ENSMUST00000082703 128 ntBASIC0.59□□□□□ -2.31
Usf1Q61069 Gm23345-201ENSMUST00000083817 150 ntBASIC0.59□□□□□ -2.31
Usf1Q61069 Gm25968-201ENSMUST00000157167 100 ntBASIC0.58□□□□□ -2.32
Usf1Q61069 Gm22586-201ENSMUST00000157507 122 ntBASIC0.58□□□□□ -2.32
Usf1Q61069 Gm25375-201ENSMUST00000158157 135 ntBASIC0.58□□□□□ -2.32
Usf1Q61069 Gm22387-201ENSMUST00000158191 131 ntBASIC0.58□□□□□ -2.32
Usf1Q61069 Gm16546-201ENSMUST00000159442 355 ntBASIC0.58□□□□□ -2.32
Usf1Q61069 AL603630.1-201ENSMUST00000214781 147 ntBASIC0.58□□□□□ -2.32
Usf1Q61069 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Usf1Q61069 Mir709-201ENSMUST00000102190 88 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Gm23203-201ENSMUST00000104374 107 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Gm25111-201ENSMUST00000116686 147 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Gm24747-201ENSMUST00000157835 87 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Gm26090-201ENSMUST00000157897 128 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Gm23219-201ENSMUST00000158123 87 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Gm24634-201ENSMUST00000158672 107 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Gm24678-201ENSMUST00000158756 104 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Mir6364-201ENSMUST00000183396 86 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Gm27747-201ENSMUST00000184707 85 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Gm27607-201ENSMUST00000185162 122 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Mir101a-201ENSMUST00000083517 83 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Snord33-201ENSMUST00000083694 84 ntBASIC0.57□□□□□ -2.32
Usf1Q61069 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Usf1Q61069 Gm13339-201ENSMUST00000120651 510 ntBASIC0.56□□□□□ -2.32
Usf1Q61069 Gm13246-201ENSMUST00000120994 315 ntBASIC0.56□□□□□ -2.32
Usf1Q61069 Gm22482-201ENSMUST00000122563 359 ntBASIC0.56□□□□□ -2.32
Usf1Q61069 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.56□□□□□ -2.32
Usf1Q61069 Gm16404-201ENSMUST00000177739 468 ntBASIC0.56□□□□□ -2.32
Usf1Q61069 Gm25235-201ENSMUST00000179933 107 ntBASIC0.56□□□□□ -2.32
Usf1Q61069 Gm14598-201ENSMUST00000180109 468 ntBASIC0.56□□□□□ -2.32
Usf1Q61069 Gm14625-201ENSMUST00000180231 468 ntBASIC0.56□□□□□ -2.32
Usf1Q61069 Gm44055-201ENSMUST00000204376 247 ntBASIC0.56□□□□□ -2.32
Usf1Q61069 Gm8219-201ENSMUST00000218309 242 ntBASIC0.56□□□□□ -2.32
Usf1Q61069 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.56□□□□□ -2.32
Usf1Q61069 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.56□□□□□ -2.32
Usf1Q61069 Snord89-201ENSMUST00000104516 110 ntBASIC0.55□□□□□ -2.32
Usf1Q61069 Gm6985-201ENSMUST00000121255 271 ntBASIC0.55□□□□□ -2.32
Usf1Q61069 Gm13797-201ENSMUST00000121792 120 ntBASIC0.55□□□□□ -2.32
Usf1Q61069 Gm45673-201ENSMUST00000210293 358 ntBASIC0.55□□□□□ -2.32
Usf1Q61069 Gm25634-201ENSMUST00000082667 105 ntBASIC0.55□□□□□ -2.32
Usf1Q61069 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.55□□□□□ -2.32
Usf1Q61069 Gm15069-201ENSMUST00000117792 192 ntBASIC0.54□□□□□ -2.32
Usf1Q61069 Gm15068-201ENSMUST00000119796 192 ntBASIC0.54□□□□□ -2.32
Usf1Q61069 Gm22796-201ENSMUST00000157234 106 ntBASIC0.54□□□□□ -2.32
Usf1Q61069 Gm26236-201ENSMUST00000175536 137 ntBASIC0.54□□□□□ -2.32
Usf1Q61069 Gm28435-201ENSMUST00000185496 108 ntBASIC0.54□□□□□ -2.32
Usf1Q61069 Gm36956-201ENSMUST00000193830 214 ntBASIC0.54□□□□□ -2.32
Usf1Q61069 Gm44373-201ENSMUST00000196112 169 ntBASIC0.54□□□□□ -2.32
Usf1Q61069 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.54□□□□□ -2.32
Usf1Q61069 Gm24616-201ENSMUST00000083274 139 ntBASIC0.54□□□□□ -2.32
Usf1Q61069 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.54□□□□□ -2.32
Usf1Q61069 Gm25378-201ENSMUST00000104333 129 ntBASIC0.53□□□□□ -2.32
Usf1Q61069 Mir669i-201ENSMUST00000117007 127 ntBASIC0.53□□□□□ -2.32
Usf1Q61069 Gm12771-201ENSMUST00000120246 135 ntBASIC0.53□□□□□ -2.32
Usf1Q61069 Gm26274-201ENSMUST00000157103 321 ntBASIC0.53□□□□□ -2.32
Usf1Q61069 Gm24006-201ENSMUST00000158462 132 ntBASIC0.53□□□□□ -2.32
Usf1Q61069 AC158981.3-202ENSMUST00000228906 523 ntBASIC0.53□□□□□ -2.32
Usf1Q61069 Mir875-201ENSMUST00000104698 78 ntBASIC0.52□□□□□ -2.33
Usf1Q61069 Gm25848-201ENSMUST00000116790 144 ntBASIC0.52□□□□□ -2.33
Usf1Q61069 Gm22051-201ENSMUST00000117002 127 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 128.8 ms