Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mir377-201ENSMUST00000083504 68 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Mir141-201ENSMUST00000083540 72 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm26329-201ENSMUST00000093723 110 ntBASIC-0.49□□□□□ -2.49
Trav5d-4Q5R1F6 Gm23191-201ENSMUST00000179147 107 ntBASIC-0.5□□□□□ -2.49
Trav5d-4Q5R1F6 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.5□□□□□ -2.49
Trav5d-4Q5R1F6 Gm27919-201ENSMUST00000185163 107 ntBASIC-0.5□□□□□ -2.49
Trav5d-4Q5R1F6 Mir721-201ENSMUST00000200230 88 ntBASIC-0.5□□□□□ -2.49
Trav5d-4Q5R1F6 AC153541.1-201ENSMUST00000213786 294 ntBASIC-0.5□□□□□ -2.49
Trav5d-4Q5R1F6 AC102369.1-201ENSMUST00000218415 373 ntBASIC-0.5□□□□□ -2.49
Trav5d-4Q5R1F6 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.51□□□□□ -2.49
Trav5d-4Q5R1F6 Gm25559-201ENSMUST00000157182 74 ntBASIC-0.51□□□□□ -2.49
Trav5d-4Q5R1F6 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.51□□□□□ -2.49
Trav5d-4Q5R1F6 Mir376a-201ENSMUST00000197584 68 ntBASIC-0.51□□□□□ -2.49
Trav5d-4Q5R1F6 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.51□□□□□ -2.49
Trav5d-4Q5R1F6 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.52□□□□□ -2.49
Trav5d-4Q5R1F6 Gm15899-201ENSMUST00000128586 238 ntBASIC-0.52□□□□□ -2.49
Trav5d-4Q5R1F6 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.52□□□□□ -2.49
Trav5d-4Q5R1F6 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.52□□□□□ -2.49
Trav5d-4Q5R1F6 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.52□□□□□ -2.49
Trav5d-4Q5R1F6 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.53□□□□□ -2.49
Trav5d-4Q5R1F6 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.53□□□□□ -2.49
Trav5d-4Q5R1F6 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.53□□□□□ -2.49
Trav5d-4Q5R1F6 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.53□□□□□ -2.49
Trav5d-4Q5R1F6 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.53□□□□□ -2.49
Trav5d-4Q5R1F6 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.53□□□□□ -2.49
Trav5d-4Q5R1F6 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.53□□□□□ -2.49
Trav5d-4Q5R1F6 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.53□□□□□ -2.49
Trav5d-4Q5R1F6 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.53□□□□□ -2.49
Trav5d-4Q5R1F6 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.53□□□□□ -2.49
Trav5d-4Q5R1F6 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.53□□□□□ -2.49
Trav5d-4Q5R1F6 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.54□□□□□ -2.5
Trav5d-4Q5R1F6 Gm23536-201ENSMUST00000157541 134 ntBASIC-0.54□□□□□ -2.5
Trav5d-4Q5R1F6 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.54□□□□□ -2.5
Trav5d-4Q5R1F6 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.54□□□□□ -2.5
Trav5d-4Q5R1F6 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.54□□□□□ -2.5
Trav5d-4Q5R1F6 AC132918.1-201ENSMUST00000227877 925 ntBASIC-0.54□□□□□ -2.5
Trav5d-4Q5R1F6 Snora75-201ENSMUST00000082903 133 ntBASIC-0.54□□□□□ -2.5
Trav5d-4Q5R1F6 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.55□□□□□ -2.5
Trav5d-4Q5R1F6 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.55□□□□□ -2.5
Trav5d-4Q5R1F6 Gm12785-201ENSMUST00000122052 172 ntBASIC-0.55□□□□□ -2.5
Trav5d-4Q5R1F6 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.55□□□□□ -2.5
Trav5d-4Q5R1F6 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.55□□□□□ -2.5
Trav5d-4Q5R1F6 Gm24037-201ENSMUST00000082871 180 ntBASIC-0.55□□□□□ -2.5
Trav5d-4Q5R1F6 Gm14293-201ENSMUST00000118528 577 ntBASIC-0.56□□□□□ -2.5
Trav5d-4Q5R1F6 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.56□□□□□ -2.5
Trav5d-4Q5R1F6 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.56□□□□□ -2.5
Trav5d-4Q5R1F6 Mir465d-201ENSMUST00000196314 58 ntBASIC-0.56□□□□□ -2.5
Trav5d-4Q5R1F6 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.56□□□□□ -2.5
Trav5d-4Q5R1F6 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.56□□□□□ -2.5
Trav5d-4Q5R1F6 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.56□□□□□ -2.5
Trav5d-4Q5R1F6 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.56□□□□□ -2.5
Trav5d-4Q5R1F6 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.56□□□□□ -2.5
Trav5d-4Q5R1F6 Mir496a-201ENSMUST00000093627 79 ntBASIC-0.56□□□□□ -2.5
Trav5d-4Q5R1F6 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
Trav5d-4Q5R1F6 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.57□□□□□ -2.5
Trav5d-4Q5R1F6 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.57□□□□□ -2.5
Trav5d-4Q5R1F6 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.57□□□□□ -2.5
Trav5d-4Q5R1F6 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.57□□□□□ -2.5
Trav5d-4Q5R1F6 Gm26107-201ENSMUST00000083972 107 ntBASIC-0.57□□□□□ -2.5
Trav5d-4Q5R1F6 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-0.57□□□□□ -2.5
Trav5d-4Q5R1F6 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.58□□□□□ -2.5
Trav5d-4Q5R1F6 Gm11407-201ENSMUST00000120362 1058 ntBASIC-0.58□□□□□ -2.5
Trav5d-4Q5R1F6 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.58□□□□□ -2.5
Trav5d-4Q5R1F6 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.58□□□□□ -2.5
Trav5d-4Q5R1F6 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
Trav5d-4Q5R1F6 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.58□□□□□ -2.5
Trav5d-4Q5R1F6 AC154484.1-201ENSMUST00000227311 771 ntBASIC-0.58□□□□□ -2.5
Trav5d-4Q5R1F6 Gm26424-201ENSMUST00000122530 104 ntBASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 Gm9227-201ENSMUST00000194733 566 ntBASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 AC166358.7-201ENSMUST00000221132 108 ntBASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 AC116589.4-201ENSMUST00000222390 216 ntBASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 AC125543.5-201ENSMUST00000222799 108 ntBASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 Gm23627-201ENSMUST00000082459 107 ntBASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 Gm22502-201ENSMUST00000082488 107 ntBASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 Gm22977-201ENSMUST00000082615 107 ntBASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 Gm24149-201ENSMUST00000082757 107 ntBASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 Gm23097-201ENSMUST00000083448 105 ntBASIC-0.59□□□□□ -2.5
Trav5d-4Q5R1F6 Gm25109-201ENSMUST00000122474 114 ntBASIC-0.6□□□□□ -2.51
Trav5d-4Q5R1F6 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.6□□□□□ -2.51
Trav5d-4Q5R1F6 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.6□□□□□ -2.51
Trav5d-4Q5R1F6 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-0.6□□□□□ -2.51
Trav5d-4Q5R1F6 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.6□□□□□ -2.51
Trav5d-4Q5R1F6 Gm23571-201ENSMUST00000180073 127 ntBASIC-0.6□□□□□ -2.51
Trav5d-4Q5R1F6 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.6□□□□□ -2.51
Trav5d-4Q5R1F6 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.6□□□□□ -2.51
Trav5d-4Q5R1F6 Gm38183-201ENSMUST00000193189 205 ntBASIC-0.6□□□□□ -2.51
Trav5d-4Q5R1F6 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.6□□□□□ -2.51
Trav5d-4Q5R1F6 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.6□□□□□ -2.51
Trav5d-4Q5R1F6 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.61□□□□□ -2.51
Trav5d-4Q5R1F6 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.61□□□□□ -2.51
Trav5d-4Q5R1F6 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.61□□□□□ -2.51
Trav5d-4Q5R1F6 Gm14574-201ENSMUST00000120644 279 ntBASIC-0.61□□□□□ -2.51
Trav5d-4Q5R1F6 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.61□□□□□ -2.51
Trav5d-4Q5R1F6 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.61□□□□□ -2.51
Trav5d-4Q5R1F6 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.61□□□□□ -2.51
Trav5d-4Q5R1F6 Gm23379-201ENSMUST00000180026 107 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms