Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm25739-201ENSMUST00000082886 107 ntBASIC-2.01□□□□□ -2.73
Ccdc88bQ4QRL3 Mup-ps22-201ENSMUST00000121611 243 ntBASIC-2.02□□□□□ -2.73
Ccdc88bQ4QRL3 Gm25559-201ENSMUST00000157182 74 ntBASIC-2.02□□□□□ -2.73
Ccdc88bQ4QRL3 AC117202.2-201ENSMUST00000226491 1101 ntBASIC-2.02□□□□□ -2.73
Ccdc88bQ4QRL3 Gm25141-201ENSMUST00000083177 107 ntBASIC-2.02□□□□□ -2.73
Ccdc88bQ4QRL3 Gm26002-201ENSMUST00000101915 107 ntBASIC-2.03□□□□□ -2.73
Ccdc88bQ4QRL3 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-2.03□□□□□ -2.73
Ccdc88bQ4QRL3 Gm12469-201ENSMUST00000117623 207 ntBASIC-2.04□□□□□ -2.74
Ccdc88bQ4QRL3 Gm15061-201ENSMUST00000121076 1046 ntBASIC-2.04□□□□□ -2.74
Ccdc88bQ4QRL3 Gm24713-201ENSMUST00000178850 107 ntBASIC-2.04□□□□□ -2.74
Ccdc88bQ4QRL3 Gm25448-201ENSMUST00000180065 107 ntBASIC-2.04□□□□□ -2.74
Ccdc88bQ4QRL3 Gm28669-201ENSMUST00000188400 100 ntBASIC-2.04□□□□□ -2.74
Ccdc88bQ4QRL3 Gm25801-201ENSMUST00000082638 106 ntBASIC-2.04□□□□□ -2.74
Ccdc88bQ4QRL3 Mir1298-201ENSMUST00000116681 98 ntBASIC-2.05□□□□□ -2.74
Ccdc88bQ4QRL3 Gm23166-201ENSMUST00000157164 101 ntBASIC-2.05□□□□□ -2.74
Ccdc88bQ4QRL3 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC-2.05□□□□□ -2.74
Ccdc88bQ4QRL3 AC158142.3-201ENSMUST00000226230 675 ntBASIC-2.05□□□□□ -2.74
Ccdc88bQ4QRL3 Scarna9-201ENSMUST00000104318 70 ntBASIC-2.06□□□□□ -2.74
Ccdc88bQ4QRL3 Gm7916-201ENSMUST00000120325 456 ntBASIC-2.06□□□□□ -2.74
Ccdc88bQ4QRL3 Gm24006-201ENSMUST00000158462 132 ntBASIC-2.06□□□□□ -2.74
Ccdc88bQ4QRL3 Gm43038-201ENSMUST00000202359 88 ntBASIC-2.06□□□□□ -2.74
Ccdc88bQ4QRL3 AC116589.9-201ENSMUST00000221462 908 ntBASIC-2.06□□□□□ -2.74
Ccdc88bQ4QRL3 Gm25789-201ENSMUST00000083294 76 ntBASIC-2.06□□□□□ -2.74
Ccdc88bQ4QRL3 Mir452-201ENSMUST00000093629 85 ntBASIC-2.06□□□□□ -2.74
Ccdc88bQ4QRL3 Gm14803-201ENSMUST00000117163 361 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm12881-201ENSMUST00000121191 203 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm26349-201ENSMUST00000157530 130 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm23754-201ENSMUST00000157576 63 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm24129-201ENSMUST00000158537 97 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm24084-201ENSMUST00000175173 137 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Mir669k-201ENSMUST00000177742 127 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm24488-201ENSMUST00000179934 127 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm25673-201ENSMUST00000179957 127 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm25701-201ENSMUST00000179988 127 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm26431-201ENSMUST00000180199 127 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm14359-201ENSMUST00000118883 424 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm13518-201ENSMUST00000120018 233 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm15279-201ENSMUST00000155593 288 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 AC153957.1-201ENSMUST00000215235 229 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 AC124569.4-201ENSMUST00000223830 1220 ntBASIC-2.07□□□□□ -2.74
Ccdc88bQ4QRL3 Gm23316-201ENSMUST00000157997 114 ntBASIC-2.08□□□□□ -2.74
Ccdc88bQ4QRL3 Gm25486-201ENSMUST00000158726 63 ntBASIC-2.08□□□□□ -2.74
Ccdc88bQ4QRL3 Gm23477-201ENSMUST00000158882 128 ntBASIC-2.08□□□□□ -2.74
Ccdc88bQ4QRL3 Gm28343-201ENSMUST00000185386 112 ntBASIC-2.08□□□□□ -2.74
Ccdc88bQ4QRL3 Gm25810-201ENSMUST00000082752 108 ntBASIC-2.08□□□□□ -2.74
Ccdc88bQ4QRL3 Gm23974-201ENSMUST00000083321 131 ntBASIC-2.08□□□□□ -2.74
Ccdc88bQ4QRL3 Gm23058-201ENSMUST00000093703 107 ntBASIC-2.08□□□□□ -2.74
Ccdc88bQ4QRL3 Gm23101-201ENSMUST00000157550 137 ntBASIC-2.09□□□□□ -2.74
Ccdc88bQ4QRL3 Gm22654-201ENSMUST00000157874 105 ntBASIC-2.09□□□□□ -2.74
Ccdc88bQ4QRL3 Gm24971-201ENSMUST00000175581 110 ntBASIC-2.09□□□□□ -2.74
Ccdc88bQ4QRL3 Gm23805-201ENSMUST00000180129 107 ntBASIC-2.09□□□□□ -2.74
Ccdc88bQ4QRL3 Gm28299-201ENSMUST00000189908 339 ntBASIC-2.09□□□□□ -2.74
Ccdc88bQ4QRL3 AC154552.4-201ENSMUST00000222171 151 ntBASIC-2.09□□□□□ -2.74
Ccdc88bQ4QRL3 AC154552.5-201ENSMUST00000222352 207 ntBASIC-2.09□□□□□ -2.74
Ccdc88bQ4QRL3 mt-Tw-201ENSMUST00000082397 67 ntBASIC-2.09□□□□□ -2.74
Ccdc88bQ4QRL3 Gm23733-201ENSMUST00000083750 106 ntBASIC-2.09□□□□□ -2.74
Ccdc88bQ4QRL3 Gm23039-201ENSMUST00000083870 161 ntBASIC-2.09□□□□□ -2.74
Ccdc88bQ4QRL3 Gm22392-201ENSMUST00000177971 107 ntBASIC-2.1□□□□□ -2.75
Ccdc88bQ4QRL3 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC-2.1□□□□□ -2.75
Ccdc88bQ4QRL3 AC122341.1-201ENSMUST00000227291 560 ntBASIC-2.1□□□□□ -2.75
Ccdc88bQ4QRL3 Gm15002-201ENSMUST00000118406 452 ntBASIC-2.11□□□□□ -2.75
Ccdc88bQ4QRL3 Gm22815-201ENSMUST00000157451 62 ntBASIC-2.11□□□□□ -2.75
Ccdc88bQ4QRL3 Gm22387-201ENSMUST00000158191 131 ntBASIC-2.11□□□□□ -2.75
Ccdc88bQ4QRL3 Gm23186-201ENSMUST00000180078 107 ntBASIC-2.11□□□□□ -2.75
Ccdc88bQ4QRL3 AC116589.1-201ENSMUST00000220634 327 ntBASIC-2.11□□□□□ -2.75
Ccdc88bQ4QRL3 AC164117.2-201ENSMUST00000222090 327 ntBASIC-2.11□□□□□ -2.75
Ccdc88bQ4QRL3 AC120553.1-201ENSMUST00000227313 260 ntBASIC-2.11□□□□□ -2.75
Ccdc88bQ4QRL3 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 Gm14638-201ENSMUST00000121338 216 ntBASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 Gm24784-201ENSMUST00000157640 62 ntBASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 Gm23770-201ENSMUST00000178009 108 ntBASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 Gm22832-201ENSMUST00000178022 108 ntBASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 Gm23863-201ENSMUST00000178265 108 ntBASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 Gm24828-201ENSMUST00000178507 108 ntBASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 Gm23052-201ENSMUST00000178633 108 ntBASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 Gm25729-201ENSMUST00000179050 108 ntBASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 Gm25359-201ENSMUST00000179315 108 ntBASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 Gm22624-201ENSMUST00000179913 108 ntBASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 AC154994.1-201ENSMUST00000217395 302 ntBASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 Gm26454-201ENSMUST00000082682 107 ntBASIC-2.12□□□□□ -2.75
Ccdc88bQ4QRL3 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-2.13□□□□□ -2.75
Ccdc88bQ4QRL3 Gm25981-201ENSMUST00000157921 295 ntBASIC-2.13□□□□□ -2.75
Ccdc88bQ4QRL3 Gm22455-201ENSMUST00000082580 71 ntBASIC-2.13□□□□□ -2.75
Ccdc88bQ4QRL3 n-R5s183-201ENSMUST00000083939 115 ntBASIC-2.13□□□□□ -2.75
Ccdc88bQ4QRL3 Mir216b-201ENSMUST00000102363 86 ntBASIC-2.14□□□□□ -2.75
Ccdc88bQ4QRL3 Mir759-201ENSMUST00000103254 98 ntBASIC-2.14□□□□□ -2.75
Ccdc88bQ4QRL3 Gm24338-201ENSMUST00000104205 127 ntBASIC-2.14□□□□□ -2.75
Ccdc88bQ4QRL3 Gm23078-201ENSMUST00000157848 148 ntBASIC-2.14□□□□□ -2.75
Ccdc88bQ4QRL3 Gm23726-201ENSMUST00000178937 67 ntBASIC-2.14□□□□□ -2.75
Ccdc88bQ4QRL3 Gm27385-201ENSMUST00000184747 104 ntBASIC-2.14□□□□□ -2.75
Ccdc88bQ4QRL3 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC-2.14□□□□□ -2.75
Ccdc88bQ4QRL3 Gm13560-201ENSMUST00000121865 329 ntBASIC-2.14□□□□□ -2.75
Ccdc88bQ4QRL3 Gm25294-201ENSMUST00000122791 104 ntBASIC-2.14□□□□□ -2.75
Ccdc88bQ4QRL3 Gm23630-201ENSMUST00000175292 104 ntBASIC-2.14□□□□□ -2.75
Ccdc88bQ4QRL3 Gm23862-201ENSMUST00000180342 94 ntBASIC-2.14□□□□□ -2.75
Ccdc88bQ4QRL3 Gm37796-201ENSMUST00000195327 134 ntBASIC-2.14□□□□□ -2.75
Ccdc88bQ4QRL3 Gm22479-201ENSMUST00000122566 81 ntBASIC-2.15□□□□□ -2.75
Retrieved 100 of 76,532 protein–RNA pairs in 146.5 ms