Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.74□□□□□ -2.29
Upf3aQ3ULJ3 Gm14568-201ENSMUST00000119321 294 ntBASIC0.74□□□□□ -2.29
Upf3aQ3ULJ3 Gm25783-201ENSMUST00000122525 190 ntBASIC0.74□□□□□ -2.29
Upf3aQ3ULJ3 Gm22586-201ENSMUST00000157507 122 ntBASIC0.74□□□□□ -2.29
Upf3aQ3ULJ3 Gm24401-201ENSMUST00000157868 91 ntBASIC0.74□□□□□ -2.29
Upf3aQ3ULJ3 Gm24634-201ENSMUST00000158672 107 ntBASIC0.74□□□□□ -2.29
Upf3aQ3ULJ3 Gm24345-201ENSMUST00000158706 124 ntBASIC0.74□□□□□ -2.29
Upf3aQ3ULJ3 Gm25634-201ENSMUST00000082667 105 ntBASIC0.74□□□□□ -2.29
Upf3aQ3ULJ3 Gm22163-201ENSMUST00000158408 135 ntBASIC0.73□□□□□ -2.29
Upf3aQ3ULJ3 Gm25362-201ENSMUST00000158854 105 ntBASIC0.73□□□□□ -2.29
Upf3aQ3ULJ3 Gm37715-201ENSMUST00000193206 235 ntBASIC0.73□□□□□ -2.29
Upf3aQ3ULJ3 Gm38113-201ENSMUST00000193704 201 ntBASIC0.73□□□□□ -2.29
Upf3aQ3ULJ3 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.73□□□□□ -2.29
Upf3aQ3ULJ3 Gm36189-201ENSMUST00000204113 523 ntBASIC0.73□□□□□ -2.29
Upf3aQ3ULJ3 Gm44921-201ENSMUST00000205290 301 ntBASIC0.73□□□□□ -2.29
Upf3aQ3ULJ3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.73□□□□□ -2.29
Upf3aQ3ULJ3 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.73□□□□□ -2.29
Upf3aQ3ULJ3 Gm11204-201ENSMUST00000122438 147 ntBASIC0.72□□□□□ -2.29
Upf3aQ3ULJ3 Gm16265-201ENSMUST00000134558 108 ntBASIC0.72□□□□□ -2.29
Upf3aQ3ULJ3 Gm23466-201ENSMUST00000157133 106 ntBASIC0.72□□□□□ -2.29
Upf3aQ3ULJ3 Gm23584-201ENSMUST00000157655 129 ntBASIC0.72□□□□□ -2.29
Upf3aQ3ULJ3 Gm22101-201ENSMUST00000157928 103 ntBASIC0.72□□□□□ -2.29
Upf3aQ3ULJ3 Gm25397-201ENSMUST00000176951 92 ntBASIC0.72□□□□□ -2.29
Upf3aQ3ULJ3 Gm27974-201ENSMUST00000183415 105 ntBASIC0.72□□□□□ -2.29
Upf3aQ3ULJ3 Gm27365-201ENSMUST00000184041 177 ntBASIC0.72□□□□□ -2.29
Upf3aQ3ULJ3 Gm42988-201ENSMUST00000198116 225 ntBASIC0.72□□□□□ -2.29
Upf3aQ3ULJ3 Gm22358-201ENSMUST00000082877 122 ntBASIC0.72□□□□□ -2.29
Upf3aQ3ULJ3 Gm25188-201ENSMUST00000083913 122 ntBASIC0.72□□□□□ -2.29
Upf3aQ3ULJ3 Gm14671-201ENSMUST00000121790 262 ntBASIC0.71□□□□□ -2.3
Upf3aQ3ULJ3 Gm26415-201ENSMUST00000157673 292 ntBASIC0.71□□□□□ -2.3
Upf3aQ3ULJ3 Gm22200-201ENSMUST00000158614 67 ntBASIC0.71□□□□□ -2.3
Upf3aQ3ULJ3 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.71□□□□□ -2.3
Upf3aQ3ULJ3 Gm22914-201ENSMUST00000175195 77 ntBASIC0.71□□□□□ -2.3
Upf3aQ3ULJ3 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.71□□□□□ -2.3
Upf3aQ3ULJ3 Gm28256-201ENSMUST00000188953 139 ntBASIC0.71□□□□□ -2.3
Upf3aQ3ULJ3 Gm28559-201ENSMUST00000190532 139 ntBASIC0.71□□□□□ -2.3
Upf3aQ3ULJ3 Gm44976-201ENSMUST00000205543 261 ntBASIC0.71□□□□□ -2.3
Upf3aQ3ULJ3 Gm45544-201ENSMUST00000211130 88 ntBASIC0.71□□□□□ -2.3
Upf3aQ3ULJ3 Gm24311-201ENSMUST00000082570 104 ntBASIC0.71□□□□□ -2.3
Upf3aQ3ULJ3 Mir669l-201ENSMUST00000103771 98 ntBASIC0.7□□□□□ -2.3
Upf3aQ3ULJ3 Gm23130-201ENSMUST00000104252 74 ntBASIC0.7□□□□□ -2.3
Upf3aQ3ULJ3 Gm23783-201ENSMUST00000157941 102 ntBASIC0.7□□□□□ -2.3
Upf3aQ3ULJ3 Gm25838-201ENSMUST00000158920 120 ntBASIC0.7□□□□□ -2.3
Upf3aQ3ULJ3 Gm18213-201ENSMUST00000207850 178 ntBASIC0.7□□□□□ -2.3
Upf3aQ3ULJ3 Gm22283-201ENSMUST00000082556 161 ntBASIC0.7□□□□□ -2.3
Upf3aQ3ULJ3 DQ267101-201ENSMUST00000082562 73 ntBASIC0.7□□□□□ -2.3
Upf3aQ3ULJ3 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Upf3aQ3ULJ3 Gm14001-201ENSMUST00000118847 247 ntBASIC0.69□□□□□ -2.3
Upf3aQ3ULJ3 Gm24015-201ENSMUST00000157725 232 ntBASIC0.69□□□□□ -2.3
Upf3aQ3ULJ3 Gm22431-201ENSMUST00000158545 107 ntBASIC0.69□□□□□ -2.3
Upf3aQ3ULJ3 Mir669k-201ENSMUST00000177742 127 ntBASIC0.69□□□□□ -2.3
Upf3aQ3ULJ3 Gm25673-201ENSMUST00000179957 127 ntBASIC0.69□□□□□ -2.3
Upf3aQ3ULJ3 Mir6364-201ENSMUST00000183396 86 ntBASIC0.69□□□□□ -2.3
Upf3aQ3ULJ3 Mir468-201ENSMUST00000197332 78 ntBASIC0.69□□□□□ -2.3
Upf3aQ3ULJ3 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.69□□□□□ -2.3
Upf3aQ3ULJ3 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
Upf3aQ3ULJ3 Gm25878-201ENSMUST00000104327 93 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Snord89-201ENSMUST00000104516 110 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Gm22051-201ENSMUST00000117002 127 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Gm24594-201ENSMUST00000122502 99 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Gm23655-201ENSMUST00000122627 105 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Mir1961-201ENSMUST00000158643 112 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Gm24880-201ENSMUST00000158776 85 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Gm25643-201ENSMUST00000158874 103 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Gm23003-201ENSMUST00000179948 107 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Gm27585-201ENSMUST00000183717 199 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Mir7079-201ENSMUST00000184697 69 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Mir33-201ENSMUST00000083531 69 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Mir451a-201ENSMUST00000093557 72 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Mir362-201ENSMUST00000093592 65 ntBASIC0.68□□□□□ -2.3
Upf3aQ3ULJ3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Gm23203-201ENSMUST00000104374 107 ntBASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Mir881-201ENSMUST00000104844 78 ntBASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Gm15069-201ENSMUST00000117792 192 ntBASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Gm15068-201ENSMUST00000119796 192 ntBASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Gm16539-201ENSMUST00000160086 327 ntBASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Gm37997-201ENSMUST00000193515 267 ntBASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Gm44462-201ENSMUST00000199696 129 ntBASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Gm45471-201ENSMUST00000211270 281 ntBASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Snord32a-201ENSMUST00000083285 83 ntBASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Gm24258-201ENSMUST00000083739 133 ntBASIC0.67□□□□□ -2.3
Upf3aQ3ULJ3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Upf3aQ3ULJ3 Gm26338-201ENSMUST00000102372 110 ntBASIC0.66□□□□□ -2.3
Upf3aQ3ULJ3 Gm13246-201ENSMUST00000120994 315 ntBASIC0.66□□□□□ -2.3
Upf3aQ3ULJ3 Gm25544-201ENSMUST00000122676 120 ntBASIC0.66□□□□□ -2.3
Upf3aQ3ULJ3 Gm23605-201ENSMUST00000157255 127 ntBASIC0.66□□□□□ -2.3
Upf3aQ3ULJ3 Gm25720-201ENSMUST00000157503 105 ntBASIC0.66□□□□□ -2.3
Upf3aQ3ULJ3 Gm24225-201ENSMUST00000158825 98 ntBASIC0.66□□□□□ -2.3
Upf3aQ3ULJ3 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.66□□□□□ -2.3
Upf3aQ3ULJ3 Gm45859-201ENSMUST00000212794 214 ntBASIC0.66□□□□□ -2.3
Upf3aQ3ULJ3 Snora20-201ENSMUST00000082703 128 ntBASIC0.66□□□□□ -2.3
Upf3aQ3ULJ3 Gm22809-201ENSMUST00000082743 156 ntBASIC0.66□□□□□ -2.3
Upf3aQ3ULJ3 Gm24171-201ENSMUST00000104126 131 ntBASIC0.65□□□□□ -2.31
Upf3aQ3ULJ3 Gm26293-201ENSMUST00000104170 84 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms