Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm22051-201ENSMUST00000117002 127 ntBASIC1.04□□□□□ -2.24
Trafd1Q3UDK1 Gm23106-201ENSMUST00000157554 101 ntBASIC1.04□□□□□ -2.24
Trafd1Q3UDK1 Gm22163-201ENSMUST00000158408 135 ntBASIC1.04□□□□□ -2.24
Trafd1Q3UDK1 Mir669k-201ENSMUST00000177742 127 ntBASIC1.04□□□□□ -2.24
Trafd1Q3UDK1 Gm25673-201ENSMUST00000179957 127 ntBASIC1.04□□□□□ -2.24
Trafd1Q3UDK1 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.04□□□□□ -2.24
Trafd1Q3UDK1 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.04□□□□□ -2.24
Trafd1Q3UDK1 Snord96a-201ENSMUST00000082791 81 ntBASIC1.04□□□□□ -2.24
Trafd1Q3UDK1 Mir448-201ENSMUST00000083516 112 ntBASIC1.04□□□□□ -2.24
Trafd1Q3UDK1 Gm25538-201ENSMUST00000101943 107 ntBASIC1.03□□□□□ -2.24
Trafd1Q3UDK1 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.03□□□□□ -2.24
Trafd1Q3UDK1 Gm26468-201ENSMUST00000158644 106 ntBASIC1.03□□□□□ -2.24
Trafd1Q3UDK1 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.03□□□□□ -2.24
Trafd1Q3UDK1 Gm26073-201ENSMUST00000179906 127 ntBASIC1.03□□□□□ -2.24
Trafd1Q3UDK1 Mir6380-201ENSMUST00000184334 81 ntBASIC1.03□□□□□ -2.24
Trafd1Q3UDK1 Gm25895-201ENSMUST00000083714 100 ntBASIC1.03□□□□□ -2.24
Trafd1Q3UDK1 Gm24494-201ENSMUST00000083804 81 ntBASIC1.03□□□□□ -2.24
Trafd1Q3UDK1 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.03□□□□□ -2.25
Trafd1Q3UDK1 Gm22003-201ENSMUST00000101885 107 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm24015-201ENSMUST00000157725 232 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm25494-201ENSMUST00000158143 100 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm26038-201ENSMUST00000158151 106 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm23545-201ENSMUST00000158205 104 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm22129-201ENSMUST00000179034 107 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm23410-201ENSMUST00000179967 107 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm22756-201ENSMUST00000180118 107 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Mir7091-201ENSMUST00000184075 79 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm42506-201ENSMUST00000202009 150 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm22505-201ENSMUST00000082956 108 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm22363-201ENSMUST00000083100 108 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm25482-201ENSMUST00000083225 107 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm23814-201ENSMUST00000083230 102 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm24929-201ENSMUST00000083403 139 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm23095-201ENSMUST00000083446 107 ntBASIC1.02□□□□□ -2.25
Trafd1Q3UDK1 Gm25506-201ENSMUST00000104339 70 ntBASIC1.01□□□□□ -2.25
Trafd1Q3UDK1 Gm25828-201ENSMUST00000157087 95 ntBASIC1.01□□□□□ -2.25
Trafd1Q3UDK1 Gm26415-201ENSMUST00000157673 292 ntBASIC1.01□□□□□ -2.25
Trafd1Q3UDK1 Gm23852-201ENSMUST00000158376 77 ntBASIC1.01□□□□□ -2.25
Trafd1Q3UDK1 Gm22074-201ENSMUST00000158595 113 ntBASIC1.01□□□□□ -2.25
Trafd1Q3UDK1 Gm24345-201ENSMUST00000158706 124 ntBASIC1.01□□□□□ -2.25
Trafd1Q3UDK1 Gm22929-201ENSMUST00000175517 107 ntBASIC1.01□□□□□ -2.25
Trafd1Q3UDK1 Gm16399-201ENSMUST00000181423 219 ntBASIC1.01□□□□□ -2.25
Trafd1Q3UDK1 Mir6394-201ENSMUST00000184738 99 ntBASIC1.01□□□□□ -2.25
Trafd1Q3UDK1 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.01□□□□□ -2.25
Trafd1Q3UDK1 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Trafd1Q3UDK1 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1□□□□□ -2.25
Trafd1Q3UDK1 Mir880-201ENSMUST00000104809 78 ntBASIC1□□□□□ -2.25
Trafd1Q3UDK1 Gm23901-201ENSMUST00000157570 107 ntBASIC1□□□□□ -2.25
Trafd1Q3UDK1 Gm25663-201ENSMUST00000157698 135 ntBASIC1□□□□□ -2.25
Trafd1Q3UDK1 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1□□□□□ -2.25
Trafd1Q3UDK1 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1□□□□□ -2.25
Trafd1Q3UDK1 Mir22-201ENSMUST00000083595 95 ntBASIC1□□□□□ -2.25
Trafd1Q3UDK1 Gm24523-201ENSMUST00000083965 132 ntBASIC1□□□□□ -2.25
Trafd1Q3UDK1 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Trafd1Q3UDK1 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
Trafd1Q3UDK1 Snord71-201ENSMUST00000104361 85 ntBASIC0.99□□□□□ -2.25
Trafd1Q3UDK1 Gm24777-201ENSMUST00000157644 107 ntBASIC0.99□□□□□ -2.25
Trafd1Q3UDK1 Gm22767-201ENSMUST00000158365 165 ntBASIC0.99□□□□□ -2.25
Trafd1Q3UDK1 Gm25834-201ENSMUST00000158916 101 ntBASIC0.99□□□□□ -2.25
Trafd1Q3UDK1 Gm25464-201ENSMUST00000175481 107 ntBASIC0.99□□□□□ -2.25
Trafd1Q3UDK1 Gm43199-201ENSMUST00000200019 307 ntBASIC0.99□□□□□ -2.25
Trafd1Q3UDK1 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.99□□□□□ -2.25
Trafd1Q3UDK1 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.99□□□□□ -2.25
Trafd1Q3UDK1 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.99□□□□□ -2.25
Trafd1Q3UDK1 Gm22686-201ENSMUST00000082847 100 ntBASIC0.99□□□□□ -2.25
Trafd1Q3UDK1 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.98□□□□□ -2.25
Trafd1Q3UDK1 Gm26074-201ENSMUST00000104063 129 ntBASIC0.98□□□□□ -2.25
Trafd1Q3UDK1 Gm22785-201ENSMUST00000104087 132 ntBASIC0.98□□□□□ -2.25
Trafd1Q3UDK1 Gm24588-201ENSMUST00000116696 83 ntBASIC0.98□□□□□ -2.25
Trafd1Q3UDK1 Gm14671-201ENSMUST00000121790 262 ntBASIC0.98□□□□□ -2.25
Trafd1Q3UDK1 Gm24000-201ENSMUST00000158063 89 ntBASIC0.98□□□□□ -2.25
Trafd1Q3UDK1 Gm23419-201ENSMUST00000175523 84 ntBASIC0.98□□□□□ -2.25
Trafd1Q3UDK1 Gm22802-201ENSMUST00000175621 89 ntBASIC0.98□□□□□ -2.25
Trafd1Q3UDK1 Gm27694-201ENSMUST00000184740 86 ntBASIC0.98□□□□□ -2.25
Trafd1Q3UDK1 Gm44464-201ENSMUST00000198010 138 ntBASIC0.98□□□□□ -2.25
Trafd1Q3UDK1 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Trafd1Q3UDK1 Gm13246-201ENSMUST00000120994 315 ntBASIC0.97□□□□□ -2.25
Trafd1Q3UDK1 Gm25223-201ENSMUST00000158200 110 ntBASIC0.97□□□□□ -2.25
Trafd1Q3UDK1 Gm24729-201ENSMUST00000158225 137 ntBASIC0.97□□□□□ -2.25
Trafd1Q3UDK1 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Trafd1Q3UDK1 Gm44358-201ENSMUST00000196301 98 ntBASIC0.97□□□□□ -2.25
Trafd1Q3UDK1 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.97□□□□□ -2.25
Trafd1Q3UDK1 Gm22283-201ENSMUST00000082556 161 ntBASIC0.97□□□□□ -2.25
Trafd1Q3UDK1 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.97□□□□□ -2.25
Trafd1Q3UDK1 Snord70-201ENSMUST00000104157 87 ntBASIC0.96□□□□□ -2.26
Trafd1Q3UDK1 Mir654-201ENSMUST00000104787 84 ntBASIC0.96□□□□□ -2.26
Trafd1Q3UDK1 Gm24640-201ENSMUST00000116949 126 ntBASIC0.96□□□□□ -2.26
Trafd1Q3UDK1 Gm22626-201ENSMUST00000116990 126 ntBASIC0.96□□□□□ -2.26
Trafd1Q3UDK1 Gm24559-201ENSMUST00000157519 121 ntBASIC0.96□□□□□ -2.26
Trafd1Q3UDK1 Gm24761-201ENSMUST00000179589 127 ntBASIC0.96□□□□□ -2.26
Trafd1Q3UDK1 Gm24488-201ENSMUST00000179934 127 ntBASIC0.96□□□□□ -2.26
Trafd1Q3UDK1 Gm25701-201ENSMUST00000179988 127 ntBASIC0.96□□□□□ -2.26
Trafd1Q3UDK1 Gm26431-201ENSMUST00000180199 127 ntBASIC0.96□□□□□ -2.26
Trafd1Q3UDK1 Gm42988-201ENSMUST00000198116 225 ntBASIC0.96□□□□□ -2.26
Trafd1Q3UDK1 Gm45002-201ENSMUST00000208045 120 ntBASIC0.96□□□□□ -2.26
Trafd1Q3UDK1 Gm25878-201ENSMUST00000104327 93 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 152.9 ms