Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm24000-201ENSMUST00000158063 89 ntBASIC0.71□□□□□ -2.3
Ctdnep1Q3TP92 Gm44464-201ENSMUST00000198010 138 ntBASIC0.71□□□□□ -2.3
Ctdnep1Q3TP92 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.71□□□□□ -2.3
Ctdnep1Q3TP92 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Ctdnep1Q3TP92 Gm22283-201ENSMUST00000082556 161 ntBASIC0.71□□□□□ -2.3
Ctdnep1Q3TP92 Mir541-201ENSMUST00000102097 90 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 Gm12686-201ENSMUST00000120546 397 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 Gm23655-201ENSMUST00000122627 105 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 Gm22145-201ENSMUST00000157396 148 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 Gm22515-201ENSMUST00000158273 305 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 Gm25015-201ENSMUST00000158400 128 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 Gm20386-201ENSMUST00000174010 132 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 Gm25949-201ENSMUST00000175333 114 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 Gm28256-201ENSMUST00000188953 139 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 Gm28559-201ENSMUST00000190532 139 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 Mir451a-201ENSMUST00000093557 72 ntBASIC0.7□□□□□ -2.3
Ctdnep1Q3TP92 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Gm24121-201ENSMUST00000102029 106 ntBASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Gm11936-201ENSMUST00000118323 160 ntBASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Gm25783-201ENSMUST00000122525 190 ntBASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Gm25184-201ENSMUST00000157753 163 ntBASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Gm22675-201ENSMUST00000158430 104 ntBASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Gm22433-201ENSMUST00000158550 142 ntBASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Gm27476-201ENSMUST00000183366 104 ntBASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Gm27365-201ENSMUST00000184041 177 ntBASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Gm27332-201ENSMUST00000184893 112 ntBASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Gm28862-201ENSMUST00000188246 163 ntBASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Mir448-201ENSMUST00000083516 112 ntBASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Ctdnep1Q3TP92 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Snord19-201ENSMUST00000104609 76 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Gm6897-201ENSMUST00000117714 138 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Gm14758-201ENSMUST00000119104 138 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Gm14568-201ENSMUST00000119321 294 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Gm23892-201ENSMUST00000158105 130 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Snora24-201ENSMUST00000174989 130 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Gm22951-201ENSMUST00000179471 107 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Gm27974-201ENSMUST00000183415 105 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Gm45544-201ENSMUST00000211130 88 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Gm22704-201ENSMUST00000083027 137 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Mir384-201ENSMUST00000083565 88 ntBASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Ctdnep1Q3TP92 Gm25878-201ENSMUST00000104327 93 ntBASIC0.67□□□□□ -2.3
Ctdnep1Q3TP92 Snord89-201ENSMUST00000104516 110 ntBASIC0.67□□□□□ -2.3
Ctdnep1Q3TP92 Mir669g-201ENSMUST00000116809 123 ntBASIC0.67□□□□□ -2.3
Ctdnep1Q3TP92 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.67□□□□□ -2.3
Ctdnep1Q3TP92 Gm14671-201ENSMUST00000121790 262 ntBASIC0.67□□□□□ -2.3
Ctdnep1Q3TP92 Gm25901-201ENSMUST00000158494 130 ntBASIC0.67□□□□□ -2.3
Ctdnep1Q3TP92 Gm23977-201ENSMUST00000177871 74 ntBASIC0.67□□□□□ -2.3
Ctdnep1Q3TP92 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.67□□□□□ -2.3
Ctdnep1Q3TP92 Mir468-201ENSMUST00000197332 78 ntBASIC0.67□□□□□ -2.3
Ctdnep1Q3TP92 Gm18213-201ENSMUST00000207850 178 ntBASIC0.67□□□□□ -2.3
Ctdnep1Q3TP92 Snora20-201ENSMUST00000082703 128 ntBASIC0.67□□□□□ -2.3
Ctdnep1Q3TP92 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.67□□□□□ -2.3
Ctdnep1Q3TP92 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm25170-201ENSMUST00000104191 129 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm22051-201ENSMUST00000117002 127 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm13246-201ENSMUST00000120994 315 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm24594-201ENSMUST00000122502 99 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm25544-201ENSMUST00000122676 120 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm24559-201ENSMUST00000157519 121 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm22200-201ENSMUST00000158614 67 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm26236-201ENSMUST00000175536 137 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm22565-201ENSMUST00000175540 69 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm25935-201ENSMUST00000178746 107 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm44989-201ENSMUST00000204749 217 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm45471-201ENSMUST00000211270 281 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm24929-201ENSMUST00000083403 139 ntBASIC0.66□□□□□ -2.3
Ctdnep1Q3TP92 Gm22003-201ENSMUST00000101885 107 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm23130-201ENSMUST00000104252 74 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm25274-201ENSMUST00000104296 135 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm22767-201ENSMUST00000158365 165 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm24880-201ENSMUST00000158776 85 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm16539-201ENSMUST00000160086 327 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm23410-201ENSMUST00000179967 107 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm22756-201ENSMUST00000180118 107 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm27668-201ENSMUST00000184188 120 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm44409-201ENSMUST00000198810 166 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm22302-201ENSMUST00000082657 106 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm22809-201ENSMUST00000082743 156 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm22505-201ENSMUST00000082956 108 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm22363-201ENSMUST00000083100 108 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm25141-201ENSMUST00000083177 107 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm23814-201ENSMUST00000083230 102 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm23095-201ENSMUST00000083446 107 ntBASIC0.65□□□□□ -2.31
Ctdnep1Q3TP92 Gm25390-201ENSMUST00000157341 103 ntBASIC0.64□□□□□ -2.31
Ctdnep1Q3TP92 Gm26090-201ENSMUST00000157897 128 ntBASIC0.64□□□□□ -2.31
Ctdnep1Q3TP92 Gm25011-201ENSMUST00000158398 126 ntBASIC0.64□□□□□ -2.31
Ctdnep1Q3TP92 Gm25718-201ENSMUST00000158632 118 ntBASIC0.64□□□□□ -2.31
Ctdnep1Q3TP92 Gm25166-201ENSMUST00000158909 111 ntBASIC0.64□□□□□ -2.31
Ctdnep1Q3TP92 Gm43432-201ENSMUST00000196352 121 ntBASIC0.64□□□□□ -2.31
Ctdnep1Q3TP92 Gm44976-201ENSMUST00000205543 261 ntBASIC0.64□□□□□ -2.31
Ctdnep1Q3TP92 Gm22686-201ENSMUST00000082847 100 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 141.7 ms