Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm16307-201ENSMUST00000161269 210 ntBASIC0.21□□□□□ -2.38
Trim43aQ3TL54 Gm38183-201ENSMUST00000193189 205 ntBASIC0.21□□□□□ -2.38
Trim43aQ3TL54 Gm45541-201ENSMUST00000210443 54 ntBASIC0.21□□□□□ -2.38
Trim43aQ3TL54 Mir30a-201ENSMUST00000083471 71 ntBASIC0.21□□□□□ -2.38
Trim43aQ3TL54 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
Trim43aQ3TL54 Gm25538-201ENSMUST00000101943 107 ntBASIC0.2□□□□□ -2.38
Trim43aQ3TL54 Mir547-201ENSMUST00000102051 78 ntBASIC0.2□□□□□ -2.38
Trim43aQ3TL54 Gm26421-201ENSMUST00000104279 132 ntBASIC0.2□□□□□ -2.38
Trim43aQ3TL54 Gm15289-201ENSMUST00000117793 244 ntBASIC0.2□□□□□ -2.38
Trim43aQ3TL54 Gm13801-201ENSMUST00000120750 160 ntBASIC0.2□□□□□ -2.38
Trim43aQ3TL54 Gm23278-201ENSMUST00000157911 143 ntBASIC0.2□□□□□ -2.38
Trim43aQ3TL54 Gm23763-201ENSMUST00000158345 60 ntBASIC0.2□□□□□ -2.38
Trim43aQ3TL54 Gm24501-201ENSMUST00000158452 62 ntBASIC0.2□□□□□ -2.38
Trim43aQ3TL54 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.2□□□□□ -2.38
Trim43aQ3TL54 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.2□□□□□ -2.38
Trim43aQ3TL54 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0.2□□□□□ -2.38
Trim43aQ3TL54 Snord69-201ENSMUST00000104024 80 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Gm25110-201ENSMUST00000116684 121 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Gm25775-201ENSMUST00000116716 121 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Gm24795-201ENSMUST00000116737 121 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Gm25171-201ENSMUST00000116926 121 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Gm26255-201ENSMUST00000122492 103 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Gm23838-201ENSMUST00000158067 162 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Gm24634-201ENSMUST00000158672 107 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Gm27475-201ENSMUST00000183420 61 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Mir6365-201ENSMUST00000183990 101 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Mir7065-201ENSMUST00000185110 61 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Gm43944-201ENSMUST00000205220 120 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Gm24316-201ENSMUST00000083041 107 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Gm24453-201ENSMUST00000083346 76 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.19□□□□□ -2.38
Trim43aQ3TL54 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.18□□□□□ -2.38
Trim43aQ3TL54 Gm22032-201ENSMUST00000116946 116 ntBASIC0.18□□□□□ -2.38
Trim43aQ3TL54 Gm22984-201ENSMUST00000122751 122 ntBASIC0.18□□□□□ -2.38
Trim43aQ3TL54 Gm22586-201ENSMUST00000157507 122 ntBASIC0.18□□□□□ -2.38
Trim43aQ3TL54 Gm25882-201ENSMUST00000157784 85 ntBASIC0.18□□□□□ -2.38
Trim43aQ3TL54 Gm22553-201ENSMUST00000157797 295 ntBASIC0.18□□□□□ -2.38
Trim43aQ3TL54 Gm24547-201ENSMUST00000158649 149 ntBASIC0.18□□□□□ -2.38
Trim43aQ3TL54 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.18□□□□□ -2.38
Trim43aQ3TL54 Gm29665-201ENSMUST00000191457 528 ntBASIC0.18□□□□□ -2.38
Trim43aQ3TL54 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.18□□□□□ -2.38
Trim43aQ3TL54 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.18□□□□□ -2.38
Trim43aQ3TL54 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.18□□□□□ -2.38
Trim43aQ3TL54 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.18□□□□□ -2.38
Trim43aQ3TL54 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Trim43aQ3TL54 Gm25497-201ENSMUST00000104425 132 ntBASIC0.17□□□□□ -2.38
Trim43aQ3TL54 Gm27723-201ENSMUST00000157398 63 ntBASIC0.17□□□□□ -2.38
Trim43aQ3TL54 Gm23375-201ENSMUST00000175407 83 ntBASIC0.17□□□□□ -2.38
Trim43aQ3TL54 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.17□□□□□ -2.38
Trim43aQ3TL54 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.17□□□□□ -2.38
Trim43aQ3TL54 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.17□□□□□ -2.38
Trim43aQ3TL54 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.17□□□□□ -2.38
Trim43aQ3TL54 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.16□□□□□ -2.38
Trim43aQ3TL54 Mir759-201ENSMUST00000103254 98 ntBASIC0.16□□□□□ -2.38
Trim43aQ3TL54 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.16□□□□□ -2.38
Trim43aQ3TL54 Gm26479-201ENSMUST00000122620 106 ntBASIC0.16□□□□□ -2.38
Trim43aQ3TL54 Gm24467-201ENSMUST00000157887 126 ntBASIC0.16□□□□□ -2.38
Trim43aQ3TL54 Gm22387-201ENSMUST00000158191 131 ntBASIC0.16□□□□□ -2.38
Trim43aQ3TL54 Gm22887-201ENSMUST00000178586 107 ntBASIC0.16□□□□□ -2.38
Trim43aQ3TL54 Gm27402-201ENSMUST00000183890 120 ntBASIC0.16□□□□□ -2.38
Trim43aQ3TL54 Gm36189-201ENSMUST00000204113 523 ntBASIC0.16□□□□□ -2.38
Trim43aQ3TL54 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.16□□□□□ -2.38
Trim43aQ3TL54 Gm25814-201ENSMUST00000082754 107 ntBASIC0.16□□□□□ -2.38
Trim43aQ3TL54 Snord95-201ENSMUST00000082846 68 ntBASIC0.16□□□□□ -2.38
Trim43aQ3TL54 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.15□□□□□ -2.39
Trim43aQ3TL54 Gm26482-201ENSMUST00000158015 62 ntBASIC0.15□□□□□ -2.39
Trim43aQ3TL54 Gm25300-201ENSMUST00000175284 84 ntBASIC0.15□□□□□ -2.39
Trim43aQ3TL54 Mir6377-201ENSMUST00000183760 114 ntBASIC0.15□□□□□ -2.39
Trim43aQ3TL54 Gm29512-201ENSMUST00000185544 315 ntBASIC0.15□□□□□ -2.39
Trim43aQ3TL54 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Trim43aQ3TL54 Gm23242-201ENSMUST00000083055 107 ntBASIC0.15□□□□□ -2.39
Trim43aQ3TL54 Gm25793-201ENSMUST00000083287 107 ntBASIC0.15□□□□□ -2.39
Trim43aQ3TL54 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.14□□□□□ -2.39
Trim43aQ3TL54 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
Trim43aQ3TL54 Gm24833-201ENSMUST00000116775 120 ntBASIC0.14□□□□□ -2.39
Trim43aQ3TL54 Gm14039-201ENSMUST00000118705 101 ntBASIC0.14□□□□□ -2.39
Trim43aQ3TL54 Gm12771-201ENSMUST00000120246 135 ntBASIC0.14□□□□□ -2.39
Trim43aQ3TL54 Gm13725-201ENSMUST00000122139 207 ntBASIC0.14□□□□□ -2.39
Trim43aQ3TL54 Gm24549-201ENSMUST00000158647 139 ntBASIC0.14□□□□□ -2.39
Trim43aQ3TL54 Gm24737-201ENSMUST00000158861 100 ntBASIC0.14□□□□□ -2.39
Trim43aQ3TL54 Gm24415-201ENSMUST00000180218 107 ntBASIC0.14□□□□□ -2.39
Trim43aQ3TL54 Gm44464-201ENSMUST00000198010 138 ntBASIC0.14□□□□□ -2.39
Trim43aQ3TL54 Gm24171-201ENSMUST00000104126 131 ntBASIC0.13□□□□□ -2.39
Trim43aQ3TL54 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.13□□□□□ -2.39
Trim43aQ3TL54 Gm24275-201ENSMUST00000116780 146 ntBASIC0.13□□□□□ -2.39
Trim43aQ3TL54 Gm13246-201ENSMUST00000120994 315 ntBASIC0.13□□□□□ -2.39
Trim43aQ3TL54 Gm23761-201ENSMUST00000158347 104 ntBASIC0.13□□□□□ -2.39
Trim43aQ3TL54 Gm22239-201ENSMUST00000175220 103 ntBASIC0.13□□□□□ -2.39
Trim43aQ3TL54 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.13□□□□□ -2.39
Trim43aQ3TL54 Gm45673-201ENSMUST00000210293 358 ntBASIC0.13□□□□□ -2.39
Trim43aQ3TL54 Gm19572-201ENSMUST00000214326 338 ntBASIC0.13□□□□□ -2.39
Trim43aQ3TL54 Gm23989-201ENSMUST00000117030 66 ntBASIC0.12□□□□□ -2.39
Trim43aQ3TL54 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.12□□□□□ -2.39
Trim43aQ3TL54 Gm15069-201ENSMUST00000117792 192 ntBASIC0.12□□□□□ -2.39
Trim43aQ3TL54 Gm15068-201ENSMUST00000119796 192 ntBASIC0.12□□□□□ -2.39
Trim43aQ3TL54 Scarna8-201ENSMUST00000158333 131 ntBASIC0.12□□□□□ -2.39
Trim43aQ3TL54 Gm26194-201ENSMUST00000175036 71 ntBASIC0.12□□□□□ -2.39
Trim43aQ3TL54 Gm22466-201ENSMUST00000175278 69 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 161.7 ms