Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
IhhP97812 Gm23735-201ENSMUST00000082551 134 ntBASIC0.78□□□□□ -2.28
IhhP97812 Gm22689-201ENSMUST00000102452 110 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm13801-201ENSMUST00000120750 160 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm24635-201ENSMUST00000122712 128 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm25720-201ENSMUST00000157503 105 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm22553-201ENSMUST00000157797 295 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm23996-201ENSMUST00000158062 131 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm24006-201ENSMUST00000158462 132 ntBASIC0.77□□□□□ -2.29
IhhP97812 Mir1931-201ENSMUST00000158589 119 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm22888-201ENSMUST00000158640 77 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm22802-201ENSMUST00000175621 89 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm27585-201ENSMUST00000183717 199 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm44326-201ENSMUST00000198226 101 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm43898-201ENSMUST00000204456 424 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm44921-201ENSMUST00000205290 301 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm24762-201ENSMUST00000083689 104 ntBASIC0.77□□□□□ -2.29
IhhP97812 Gm13797-201ENSMUST00000121792 120 ntBASIC0.76□□□□□ -2.29
IhhP97812 Gm25362-201ENSMUST00000158854 105 ntBASIC0.76□□□□□ -2.29
IhhP97812 Gm37715-201ENSMUST00000193206 235 ntBASIC0.76□□□□□ -2.29
IhhP97812 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.76□□□□□ -2.29
IhhP97812 Mir146-201ENSMUST00000083667 65 ntBASIC0.76□□□□□ -2.29
IhhP97812 Gm26293-201ENSMUST00000104170 84 ntBASIC0.75□□□□□ -2.29
IhhP97812 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.75□□□□□ -2.29
IhhP97812 Gm22586-201ENSMUST00000157507 122 ntBASIC0.75□□□□□ -2.29
IhhP97812 Gm25558-201ENSMUST00000158083 106 ntBASIC0.75□□□□□ -2.29
IhhP97812 Mir3109-201ENSMUST00000175301 88 ntBASIC0.75□□□□□ -2.29
IhhP97812 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.75□□□□□ -2.29
IhhP97812 Gm25634-201ENSMUST00000082667 105 ntBASIC0.75□□□□□ -2.29
IhhP97812 Gm22358-201ENSMUST00000082877 122 ntBASIC0.75□□□□□ -2.29
IhhP97812 Gm25188-201ENSMUST00000083913 122 ntBASIC0.75□□□□□ -2.29
IhhP97812 Gm22544-201ENSMUST00000104349 127 ntBASIC0.74□□□□□ -2.29
IhhP97812 Gm24015-201ENSMUST00000157725 232 ntBASIC0.74□□□□□ -2.29
IhhP97812 Gm24401-201ENSMUST00000157868 91 ntBASIC0.74□□□□□ -2.29
IhhP97812 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.74□□□□□ -2.29
IhhP97812 Gm38323-201ENSMUST00000192450 210 ntBASIC0.74□□□□□ -2.29
IhhP97812 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.74□□□□□ -2.29
IhhP97812 Gm25142-201ENSMUST00000082698 107 ntBASIC0.74□□□□□ -2.29
IhhP97812 Gm23841-201ENSMUST00000116951 114 ntBASIC0.73□□□□□ -2.29
IhhP97812 Gm28020-201ENSMUST00000157739 67 ntBASIC0.73□□□□□ -2.29
IhhP97812 Gm24345-201ENSMUST00000158706 124 ntBASIC0.73□□□□□ -2.29
IhhP97812 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.73□□□□□ -2.29
IhhP97812 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.73□□□□□ -2.29
IhhP97812 Gm20386-201ENSMUST00000174010 132 ntBASIC0.73□□□□□ -2.29
IhhP97812 Snora15-201ENSMUST00000177461 131 ntBASIC0.73□□□□□ -2.29
IhhP97812 Gm26073-201ENSMUST00000179906 127 ntBASIC0.73□□□□□ -2.29
IhhP97812 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.73□□□□□ -2.29
IhhP97812 Gm28669-201ENSMUST00000188400 100 ntBASIC0.73□□□□□ -2.29
IhhP97812 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.73□□□□□ -2.29
IhhP97812 Gm37997-201ENSMUST00000193515 267 ntBASIC0.73□□□□□ -2.29
IhhP97812 Gm42988-201ENSMUST00000198116 225 ntBASIC0.73□□□□□ -2.29
IhhP97812 Gm44396-201ENSMUST00000199843 114 ntBASIC0.73□□□□□ -2.29
IhhP97812 Gm26421-201ENSMUST00000104279 132 ntBASIC0.72□□□□□ -2.29
IhhP97812 Gm45508-201ENSMUST00000209298 299 ntBASIC0.72□□□□□ -2.29
IhhP97812 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.72□□□□□ -2.29
IhhP97812 Gm24311-201ENSMUST00000082570 104 ntBASIC0.72□□□□□ -2.29
IhhP97812 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
IhhP97812 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.29
IhhP97812 Gm14568-201ENSMUST00000119321 294 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm12686-201ENSMUST00000120546 397 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm13577-201ENSMUST00000121365 205 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm26026-201ENSMUST00000122726 123 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm26415-201ENSMUST00000157673 292 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm25015-201ENSMUST00000158400 128 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm22163-201ENSMUST00000158408 135 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm22675-201ENSMUST00000158430 104 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm24772-201ENSMUST00000158507 110 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm25247-201ENSMUST00000175475 90 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm23047-201ENSMUST00000177661 94 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm27974-201ENSMUST00000183415 105 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm36189-201ENSMUST00000204113 523 ntBASIC0.71□□□□□ -2.3
IhhP97812 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.71□□□□□ -2.3
IhhP97812 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
IhhP97812 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
IhhP97812 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.7□□□□□ -2.3
IhhP97812 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
IhhP97812 Mir654-201ENSMUST00000104787 84 ntBASIC0.7□□□□□ -2.3
IhhP97812 Mir880-201ENSMUST00000104809 78 ntBASIC0.7□□□□□ -2.3
IhhP97812 Gm11204-201ENSMUST00000122438 147 ntBASIC0.7□□□□□ -2.3
IhhP97812 Gm23584-201ENSMUST00000157655 129 ntBASIC0.7□□□□□ -2.3
IhhP97812 Gm25184-201ENSMUST00000157753 163 ntBASIC0.7□□□□□ -2.3
IhhP97812 Gm23977-201ENSMUST00000177871 74 ntBASIC0.7□□□□□ -2.3
IhhP97812 Mir6364-201ENSMUST00000183396 86 ntBASIC0.7□□□□□ -2.3
IhhP97812 Gm27332-201ENSMUST00000184893 112 ntBASIC0.7□□□□□ -2.3
IhhP97812 Gm27607-201ENSMUST00000185162 122 ntBASIC0.7□□□□□ -2.3
IhhP97812 Gm6003-201ENSMUST00000187903 463 ntBASIC0.7□□□□□ -2.3
IhhP97812 Gm38113-201ENSMUST00000193704 201 ntBASIC0.7□□□□□ -2.3
IhhP97812 Gm44057-201ENSMUST00000204547 96 ntBASIC0.7□□□□□ -2.3
IhhP97812 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.7□□□□□ -2.3
IhhP97812 Mir33-201ENSMUST00000083531 69 ntBASIC0.7□□□□□ -2.3
IhhP97812 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
IhhP97812 Mir541-201ENSMUST00000102097 90 ntBASIC0.69□□□□□ -2.3
IhhP97812 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.69□□□□□ -2.3
IhhP97812 Gm6985-201ENSMUST00000121255 271 ntBASIC0.69□□□□□ -2.3
IhhP97812 Gm12815-201ENSMUST00000121737 135 ntBASIC0.69□□□□□ -2.3
IhhP97812 Gm22145-201ENSMUST00000157396 148 ntBASIC0.69□□□□□ -2.3
IhhP97812 Gm22433-201ENSMUST00000158550 142 ntBASIC0.69□□□□□ -2.3
IhhP97812 Gm22951-201ENSMUST00000179471 107 ntBASIC0.69□□□□□ -2.3
IhhP97812 Gm44464-201ENSMUST00000198010 138 ntBASIC0.69□□□□□ -2.3
IhhP97812 Gm18213-201ENSMUST00000207850 178 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 218.3 ms