Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.56□□□□□ -2.32
Ufd1P70362 Gm24579-201ENSMUST00000103964 144 ntBASIC0.55□□□□□ -2.32
Ufd1P70362 Gm25323-201ENSMUST00000122555 103 ntBASIC0.55□□□□□ -2.32
Ufd1P70362 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.55□□□□□ -2.32
Ufd1P70362 Gm26274-201ENSMUST00000157103 321 ntBASIC0.55□□□□□ -2.32
Ufd1P70362 Gm23375-201ENSMUST00000175407 83 ntBASIC0.55□□□□□ -2.32
Ufd1P70362 Gm25935-201ENSMUST00000178746 107 ntBASIC0.55□□□□□ -2.32
Ufd1P70362 Mir6364-201ENSMUST00000183396 86 ntBASIC0.55□□□□□ -2.32
Ufd1P70362 Mir8090-201ENSMUST00000185078 136 ntBASIC0.55□□□□□ -2.32
Ufd1P70362 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.55□□□□□ -2.32
Ufd1P70362 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.55□□□□□ -2.32
Ufd1P70362 Mir101a-201ENSMUST00000083517 83 ntBASIC0.55□□□□□ -2.32
Ufd1P70362 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
Ufd1P70362 Mir547-201ENSMUST00000102051 78 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm26293-201ENSMUST00000104170 84 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm13922-201ENSMUST00000119505 156 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm12837-201ENSMUST00000120131 373 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm14883-201ENSMUST00000120179 157 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm24594-201ENSMUST00000122502 99 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm22796-201ENSMUST00000157234 106 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm23329-201ENSMUST00000157415 108 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm23328-201ENSMUST00000157418 132 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm24942-201ENSMUST00000158328 114 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm25362-201ENSMUST00000158854 105 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm16307-201ENSMUST00000161269 210 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm24154-201ENSMUST00000175261 130 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm22801-201ENSMUST00000175624 84 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm36956-201ENSMUST00000193830 214 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm44320-201ENSMUST00000199276 86 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.54□□□□□ -2.32
Ufd1P70362 Mir500-201ENSMUST00000093600 92 ntBASIC0.54□□□□□ -2.32
Ufd1P70362 Gm25378-201ENSMUST00000104333 129 ntBASIC0.53□□□□□ -2.32
Ufd1P70362 Gm25377-201ENSMUST00000104334 129 ntBASIC0.53□□□□□ -2.32
Ufd1P70362 Gm27585-201ENSMUST00000183717 199 ntBASIC0.53□□□□□ -2.32
Ufd1P70362 Gm27905-201ENSMUST00000184005 207 ntBASIC0.53□□□□□ -2.32
Ufd1P70362 Gm7258-201ENSMUST00000179317 300 ntBASIC0.52□□□□□ -2.33
Ufd1P70362 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Ufd1P70362 Mir7059-201ENSMUST00000184825 59 ntBASIC0.52□□□□□ -2.33
Ufd1P70362 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Ufd1P70362 Gm44488-201ENSMUST00000199467 119 ntBASIC0.52□□□□□ -2.33
Ufd1P70362 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.52□□□□□ -2.33
Ufd1P70362 Gm22786-201ENSMUST00000104086 122 ntBASIC0.51□□□□□ -2.33
Ufd1P70362 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Ufd1P70362 Gm23760-201ENSMUST00000158350 116 ntBASIC0.51□□□□□ -2.33
Ufd1P70362 Mir1933-201ENSMUST00000158930 88 ntBASIC0.51□□□□□ -2.33
Ufd1P70362 Mir6240-201ENSMUST00000184281 117 ntBASIC0.51□□□□□ -2.33
Ufd1P70362 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.51□□□□□ -2.33
Ufd1P70362 Gm18188-201ENSMUST00000219386 478 ntBASIC0.51□□□□□ -2.33
Ufd1P70362 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.51□□□□□ -2.33
Ufd1P70362 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.51□□□□□ -2.33
Ufd1P70362 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Ufd1P70362 Mir881-201ENSMUST00000104844 78 ntBASIC0.5□□□□□ -2.33
Ufd1P70362 Gm26026-201ENSMUST00000122726 123 ntBASIC0.5□□□□□ -2.33
Ufd1P70362 Gm23763-201ENSMUST00000158345 60 ntBASIC0.5□□□□□ -2.33
Ufd1P70362 Gm6003-201ENSMUST00000187903 463 ntBASIC0.5□□□□□ -2.33
Ufd1P70362 Gm23377-201ENSMUST00000082943 126 ntBASIC0.5□□□□□ -2.33
Ufd1P70362 Gm24929-201ENSMUST00000083403 139 ntBASIC0.5□□□□□ -2.33
Ufd1P70362 Mir146-201ENSMUST00000083667 65 ntBASIC0.5□□□□□ -2.33
Ufd1P70362 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.5□□□□□ -2.33
Ufd1P70362 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Gm26082-201ENSMUST00000104070 127 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Gm25720-201ENSMUST00000157503 105 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Gm25241-201ENSMUST00000174909 84 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Gm26217-201ENSMUST00000175212 84 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Gm27289-201ENSMUST00000183341 82 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Mir6377-201ENSMUST00000183760 114 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Gm43911-201ENSMUST00000203097 76 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Gm46993-201ENSMUST00000220708 259 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Gm22302-201ENSMUST00000082657 106 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Gm25138-201ENSMUST00000083248 136 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Mir384-201ENSMUST00000083565 88 ntBASIC0.49□□□□□ -2.33
Ufd1P70362 Gm23766-201ENSMUST00000103894 80 ntBASIC0.48□□□□□ -2.33
Ufd1P70362 Gm23853-201ENSMUST00000158375 104 ntBASIC0.48□□□□□ -2.33
Ufd1P70362 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.48□□□□□ -2.33
Ufd1P70362 Mir7009-201ENSMUST00000184519 64 ntBASIC0.48□□□□□ -2.33
Ufd1P70362 Gm45859-201ENSMUST00000212794 214 ntBASIC0.48□□□□□ -2.33
Ufd1P70362 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.48□□□□□ -2.33
Ufd1P70362 Gm24624-201ENSMUST00000082617 164 ntBASIC0.48□□□□□ -2.33
Ufd1P70362 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Ufd1P70362 Gm25882-201ENSMUST00000157784 85 ntBASIC0.47□□□□□ -2.33
Ufd1P70362 Gm24547-201ENSMUST00000158649 149 ntBASIC0.47□□□□□ -2.33
Ufd1P70362 Gm22887-201ENSMUST00000178586 107 ntBASIC0.47□□□□□ -2.33
Ufd1P70362 Gm27672-201ENSMUST00000183751 204 ntBASIC0.47□□□□□ -2.33
Ufd1P70362 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.47□□□□□ -2.33
Ufd1P70362 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.47□□□□□ -2.33
Ufd1P70362 Gm26076-201ENSMUST00000104065 105 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm25110-201ENSMUST00000116684 121 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm25775-201ENSMUST00000116716 121 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm24795-201ENSMUST00000116737 121 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm25171-201ENSMUST00000116926 121 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm25509-201ENSMUST00000116985 106 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm14946-201ENSMUST00000119859 296 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm12815-201ENSMUST00000121737 135 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm24385-201ENSMUST00000122694 350 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm28020-201ENSMUST00000157739 67 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm25267-201ENSMUST00000158522 63 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm25715-201ENSMUST00000158627 125 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms