Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Mir544-201ENSMUST00000103813 78 ntBASIC1.49□□□□□ -2.17
SmoP56726 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.49□□□□□ -2.17
SmoP56726 Gm22403-201ENSMUST00000174919 84 ntBASIC1.49□□□□□ -2.17
SmoP56726 Gm44922-201ENSMUST00000206690 90 ntBASIC1.49□□□□□ -2.17
SmoP56726 Gm25855-201ENSMUST00000082787 72 ntBASIC1.49□□□□□ -2.17
SmoP56726 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.49□□□□□ -2.17
SmoP56726 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SmoP56726 Gm25068-201ENSMUST00000103895 110 ntBASIC1.48□□□□□ -2.17
SmoP56726 Snord13-201ENSMUST00000157627 104 ntBASIC1.48□□□□□ -2.17
SmoP56726 Gm27493-201ENSMUST00000184128 78 ntBASIC1.48□□□□□ -2.17
SmoP56726 Gm22738-201ENSMUST00000083440 147 ntBASIC1.48□□□□□ -2.17
SmoP56726 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.48□□□□□ -2.17
SmoP56726 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SmoP56726 Gm26074-201ENSMUST00000104063 129 ntBASIC1.47□□□□□ -2.17
SmoP56726 Gm13345-201ENSMUST00000121928 228 ntBASIC1.47□□□□□ -2.17
SmoP56726 Gm22929-201ENSMUST00000175517 107 ntBASIC1.47□□□□□ -2.17
SmoP56726 Gm22911-201ENSMUST00000177920 107 ntBASIC1.47□□□□□ -2.17
SmoP56726 Gm27928-201ENSMUST00000183747 256 ntBASIC1.47□□□□□ -2.17
SmoP56726 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
SmoP56726 Gm25541-201ENSMUST00000116888 126 ntBASIC1.46□□□□□ -2.18
SmoP56726 Gm23122-201ENSMUST00000157645 103 ntBASIC1.46□□□□□ -2.18
SmoP56726 Gm23277-201ENSMUST00000157914 136 ntBASIC1.46□□□□□ -2.18
SmoP56726 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.46□□□□□ -2.18
SmoP56726 Gm26073-201ENSMUST00000179906 127 ntBASIC1.46□□□□□ -2.18
SmoP56726 Gm28794-201ENSMUST00000185276 136 ntBASIC1.46□□□□□ -2.18
SmoP56726 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.46□□□□□ -2.18
SmoP56726 Snord1a-201ENSMUST00000083160 74 ntBASIC1.46□□□□□ -2.18
SmoP56726 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.45□□□□□ -2.18
SmoP56726 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.45□□□□□ -2.18
SmoP56726 Gm25599-201ENSMUST00000157816 103 ntBASIC1.45□□□□□ -2.18
SmoP56726 Gm26038-201ENSMUST00000158151 106 ntBASIC1.45□□□□□ -2.18
SmoP56726 Gm24677-201ENSMUST00000158755 150 ntBASIC1.45□□□□□ -2.18
SmoP56726 Gm26097-201ENSMUST00000179642 93 ntBASIC1.45□□□□□ -2.18
SmoP56726 Gm2077-201ENSMUST00000195017 319 ntBASIC1.45□□□□□ -2.18
SmoP56726 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.45□□□□□ -2.18
SmoP56726 Gm16976-205ENSMUST00000227324 226 ntBASIC1.45□□□□□ -2.18
SmoP56726 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.45□□□□□ -2.18
SmoP56726 Mir488-201ENSMUST00000093595 109 ntBASIC1.45□□□□□ -2.18
SmoP56726 Mir653-201ENSMUST00000102402 85 ntBASIC1.44□□□□□ -2.18
SmoP56726 Gm25992-201ENSMUST00000102437 109 ntBASIC1.44□□□□□ -2.18
SmoP56726 Gm24683-201ENSMUST00000104840 88 ntBASIC1.44□□□□□ -2.18
SmoP56726 Gm23221-201ENSMUST00000158118 93 ntBASIC1.44□□□□□ -2.18
SmoP56726 Gm22606-201ENSMUST00000158290 103 ntBASIC1.44□□□□□ -2.18
SmoP56726 Gm24131-201ENSMUST00000158539 107 ntBASIC1.44□□□□□ -2.18
SmoP56726 Gm16546-201ENSMUST00000159442 355 ntBASIC1.44□□□□□ -2.18
SmoP56726 Gm22704-201ENSMUST00000083027 137 ntBASIC1.44□□□□□ -2.18
SmoP56726 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.44□□□□□ -2.18
SmoP56726 BC022960-201ENSMUST00000119987 1815 ntBASIC1.44□□□□□ -2.18
SmoP56726 Gm23990-201ENSMUST00000117031 117 ntBASIC1.43□□□□□ -2.18
SmoP56726 Gm23080-201ENSMUST00000157846 103 ntBASIC1.43□□□□□ -2.18
SmoP56726 Gm22612-201ENSMUST00000158293 101 ntBASIC1.43□□□□□ -2.18
SmoP56726 Gm24106-201ENSMUST00000175498 127 ntBASIC1.43□□□□□ -2.18
SmoP56726 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.43□□□□□ -2.18
SmoP56726 Gm23772-201ENSMUST00000104433 102 ntBASIC1.42□□□□□ -2.18
SmoP56726 Mir1298-201ENSMUST00000116681 98 ntBASIC1.42□□□□□ -2.18
SmoP56726 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.42□□□□□ -2.18
SmoP56726 Gm22164-201ENSMUST00000158413 106 ntBASIC1.42□□□□□ -2.18
SmoP56726 Gm26403-201ENSMUST00000158500 105 ntBASIC1.42□□□□□ -2.18
SmoP56726 Gm25364-201ENSMUST00000158851 107 ntBASIC1.42□□□□□ -2.18
SmoP56726 Gm20391-201ENSMUST00000174722 106 ntBASIC1.42□□□□□ -2.18
SmoP56726 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.42□□□□□ -2.18
SmoP56726 Snora20-201ENSMUST00000082703 128 ntBASIC1.42□□□□□ -2.18
SmoP56726 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SmoP56726 Gm26049-201ENSMUST00000157313 108 ntBASIC1.41□□□□□ -2.18
SmoP56726 Gm25949-201ENSMUST00000175333 114 ntBASIC1.41□□□□□ -2.18
SmoP56726 Gm23567-201ENSMUST00000178005 107 ntBASIC1.41□□□□□ -2.18
SmoP56726 Gm44962-201ENSMUST00000206460 279 ntBASIC1.41□□□□□ -2.18
SmoP56726 Gm14923-201ENSMUST00000118270 155 ntBASIC1.4□□□□□ -2.19
SmoP56726 Gm25882-201ENSMUST00000157784 85 ntBASIC1.4□□□□□ -2.19
SmoP56726 Gm25771-201ENSMUST00000158565 144 ntBASIC1.4□□□□□ -2.19
SmoP56726 Mir1966-201ENSMUST00000158807 108 ntBASIC1.4□□□□□ -2.19
SmoP56726 Gm22348-201ENSMUST00000178674 79 ntBASIC1.4□□□□□ -2.19
SmoP56726 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.4□□□□□ -2.19
SmoP56726 Gm25636-201ENSMUST00000082666 133 ntBASIC1.4□□□□□ -2.19
SmoP56726 Gm24494-201ENSMUST00000083804 81 ntBASIC1.4□□□□□ -2.19
SmoP56726 Mir654-201ENSMUST00000104787 84 ntBASIC1.39□□□□□ -2.19
SmoP56726 Gm11792-201ENSMUST00000120640 168 ntBASIC1.39□□□□□ -2.19
SmoP56726 Gm26090-201ENSMUST00000157897 128 ntBASIC1.39□□□□□ -2.19
SmoP56726 Gm25716-201ENSMUST00000158628 104 ntBASIC1.39□□□□□ -2.19
SmoP56726 Gm27934-201ENSMUST00000158795 63 ntBASIC1.39□□□□□ -2.19
SmoP56726 Gm25936-201ENSMUST00000179952 114 ntBASIC1.39□□□□□ -2.19
SmoP56726 Gm44483-201ENSMUST00000197203 97 ntBASIC1.39□□□□□ -2.19
SmoP56726 Gm42623-201ENSMUST00000197225 379 ntBASIC1.39□□□□□ -2.19
SmoP56726 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.39□□□□□ -2.19
SmoP56726 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.39□□□□□ -2.19
SmoP56726 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.39□□□□□ -2.19
SmoP56726 Gm23299-201ENSMUST00000082708 79 ntBASIC1.39□□□□□ -2.19
SmoP56726 Mir451a-201ENSMUST00000093557 72 ntBASIC1.39□□□□□ -2.19
SmoP56726 Mir489-201ENSMUST00000093599 107 ntBASIC1.39□□□□□ -2.19
SmoP56726 Gm25759-201ENSMUST00000103988 129 ntBASIC1.38□□□□□ -2.19
SmoP56726 Gm23336-201ENSMUST00000117023 123 ntBASIC1.38□□□□□ -2.19
SmoP56726 Gm24895-201ENSMUST00000122742 74 ntBASIC1.38□□□□□ -2.19
SmoP56726 Gm22967-201ENSMUST00000157956 239 ntBASIC1.38□□□□□ -2.19
SmoP56726 Gm22963-201ENSMUST00000157960 91 ntBASIC1.38□□□□□ -2.19
SmoP56726 Gm25838-201ENSMUST00000158920 120 ntBASIC1.38□□□□□ -2.19
SmoP56726 Gm27265-201ENSMUST00000183559 77 ntBASIC1.38□□□□□ -2.19
SmoP56726 Gm43381-201ENSMUST00000198553 165 ntBASIC1.38□□□□□ -2.19
SmoP56726 Gm25588-201ENSMUST00000082501 140 ntBASIC1.38□□□□□ -2.19
SmoP56726 Mir201-201ENSMUST00000083470 66 ntBASIC1.38□□□□□ -2.19
SmoP56726 Gm22785-201ENSMUST00000104087 132 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 165.5 ms