Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.74□□□□□ -2.53
Cux1P53564 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.74□□□□□ -2.53
Cux1P53564 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.74□□□□□ -2.53
Cux1P53564 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.74□□□□□ -2.53
Cux1P53564 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-0.74□□□□□ -2.53
Cux1P53564 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.74□□□□□ -2.53
Cux1P53564 Gm25801-201ENSMUST00000082638 106 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Gm23515-201ENSMUST00000082829 107 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Gm23101-201ENSMUST00000157550 137 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Gm23145-201ENSMUST00000178912 79 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Gm44464-201ENSMUST00000198010 138 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Gm44135-201ENSMUST00000205221 368 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Mir183-201ENSMUST00000083685 70 ntBASIC-0.74□□□□□ -2.53
Cux1P53564 Gm24901-201ENSMUST00000158125 110 ntBASIC-0.75□□□□□ -2.53
Cux1P53564 Gm26164-201ENSMUST00000083793 104 ntBASIC-0.75□□□□□ -2.53
Cux1P53564 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.76□□□□□ -2.53
Cux1P53564 Gm25781-201ENSMUST00000122527 84 ntBASIC-0.76□□□□□ -2.53
Cux1P53564 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.76□□□□□ -2.53
Cux1P53564 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-0.76□□□□□ -2.53
Cux1P53564 Gm25930-201ENSMUST00000082785 107 ntBASIC-0.76□□□□□ -2.53
Cux1P53564 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.77□□□□□ -2.53
Cux1P53564 Gm26415-201ENSMUST00000157673 292 ntBASIC-0.77□□□□□ -2.53
Cux1P53564 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.77□□□□□ -2.53
Cux1P53564 Gm26217-201ENSMUST00000175212 84 ntBASIC-0.77□□□□□ -2.53
Cux1P53564 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.77□□□□□ -2.53
Cux1P53564 AC129085.1-201ENSMUST00000225263 165 ntBASIC-0.77□□□□□ -2.53
Cux1P53564 AC098718.2-201ENSMUST00000226822 285 ntBASIC-0.77□□□□□ -2.53
Cux1P53564 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.78□□□□□ -2.53
Cux1P53564 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-0.78□□□□□ -2.53
Cux1P53564 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.78□□□□□ -2.53
Cux1P53564 Gm26430-201ENSMUST00000178054 107 ntBASIC-0.78□□□□□ -2.53
Cux1P53564 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.78□□□□□ -2.53
Cux1P53564 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.79□□□□□ -2.54
Cux1P53564 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.79□□□□□ -2.54
Cux1P53564 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.79□□□□□ -2.54
Cux1P53564 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.79□□□□□ -2.54
Cux1P53564 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.79□□□□□ -2.54
Cux1P53564 Gm37438-201ENSMUST00000192813 393 ntBASIC-0.79□□□□□ -2.54
Cux1P53564 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.79□□□□□ -2.54
Cux1P53564 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.79□□□□□ -2.54
Cux1P53564 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.79□□□□□ -2.54
Cux1P53564 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-0.79□□□□□ -2.54
Cux1P53564 Gm22215-201ENSMUST00000157558 96 ntBASIC-0.79□□□□□ -2.54
Cux1P53564 Gm25163-201ENSMUST00000158905 104 ntBASIC-0.79□□□□□ -2.54
Cux1P53564 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.79□□□□□ -2.54
Cux1P53564 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.8□□□□□ -2.54
Cux1P53564 Gm15899-201ENSMUST00000128586 238 ntBASIC-0.8□□□□□ -2.54
Cux1P53564 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.8□□□□□ -2.54
Cux1P53564 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.8□□□□□ -2.54
Cux1P53564 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
Cux1P53564 Mir327-201ENSMUST00000199328 69 ntBASIC-0.8□□□□□ -2.54
Cux1P53564 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.8□□□□□ -2.54
Cux1P53564 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.8□□□□□ -2.54
Cux1P53564 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
Cux1P53564 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-0.81□□□□□ -2.54
Cux1P53564 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.81□□□□□ -2.54
Cux1P53564 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.81□□□□□ -2.54
Cux1P53564 Gm24315-201ENSMUST00000177835 127 ntBASIC-0.81□□□□□ -2.54
Cux1P53564 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.81□□□□□ -2.54
Cux1P53564 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.82□□□□□ -2.54
Cux1P53564 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.82□□□□□ -2.54
Cux1P53564 Gm5001-201ENSMUST00000204361 331 ntBASIC-0.82□□□□□ -2.54
Cux1P53564 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.82□□□□□ -2.54
Cux1P53564 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.83□□□□□ -2.54
Cux1P53564 Gm23759-201ENSMUST00000158351 268 ntBASIC-0.83□□□□□ -2.54
Cux1P53564 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.83□□□□□ -2.54
Cux1P53564 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.83□□□□□ -2.54
Cux1P53564 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.83□□□□□ -2.54
Cux1P53564 Mir532-201ENSMUST00000093630 96 ntBASIC-0.83□□□□□ -2.54
Cux1P53564 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.83□□□□□ -2.54
Cux1P53564 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.84□□□□□ -2.54
Cux1P53564 Gm24847-201ENSMUST00000158032 108 ntBASIC-0.84□□□□□ -2.54
Cux1P53564 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.84□□□□□ -2.54
Cux1P53564 Gm37338-201ENSMUST00000191986 127 ntBASIC-0.84□□□□□ -2.54
Cux1P53564 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.84□□□□□ -2.54
Cux1P53564 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.84□□□□□ -2.54
Cux1P53564 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.84□□□□□ -2.54
Cux1P53564 Gm25102-201ENSMUST00000122479 112 ntBASIC-0.84□□□□□ -2.54
Cux1P53564 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.84□□□□□ -2.54
Cux1P53564 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.84□□□□□ -2.54
Cux1P53564 Gm23492-201ENSMUST00000116837 115 ntBASIC-0.85□□□□□ -2.55
Cux1P53564 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-0.85□□□□□ -2.55
Cux1P53564 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC-0.85□□□□□ -2.55
Cux1P53564 AC121844.1-201ENSMUST00000218706 137 ntBASIC-0.85□□□□□ -2.55
Cux1P53564 Gm22294-201ENSMUST00000083308 104 ntBASIC-0.85□□□□□ -2.55
Cux1P53564 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
Cux1P53564 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.86□□□□□ -2.55
Cux1P53564 Gm22883-201ENSMUST00000157376 106 ntBASIC-0.86□□□□□ -2.55
Cux1P53564 Gm22166-201ENSMUST00000178419 121 ntBASIC-0.86□□□□□ -2.55
Cux1P53564 Gm23288-201ENSMUST00000179213 121 ntBASIC-0.86□□□□□ -2.55
Cux1P53564 Gm18291-201ENSMUST00000190791 301 ntBASIC-0.86□□□□□ -2.55
Cux1P53564 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms