Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Gm22387-201ENSMUST00000158191 131 ntBASIC1.09□□□□□ -2.23
SftpdP50404 Gm23258-201ENSMUST00000158319 106 ntBASIC1.09□□□□□ -2.23
SftpdP50404 Gm23114-201ENSMUST00000158478 117 ntBASIC1.09□□□□□ -2.23
SftpdP50404 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.09□□□□□ -2.23
SftpdP50404 Gm23423-201ENSMUST00000082782 106 ntBASIC1.09□□□□□ -2.23
SftpdP50404 Gm24929-201ENSMUST00000083403 139 ntBASIC1.09□□□□□ -2.23
SftpdP50404 Gm14838-201ENSMUST00000118913 248 ntBASIC1.08□□□□□ -2.24
SftpdP50404 Gm24559-201ENSMUST00000157519 121 ntBASIC1.08□□□□□ -2.24
SftpdP50404 Gm25267-201ENSMUST00000158522 63 ntBASIC1.08□□□□□ -2.24
SftpdP50404 Gm22914-201ENSMUST00000175195 77 ntBASIC1.08□□□□□ -2.24
SftpdP50404 Gm25949-201ENSMUST00000175333 114 ntBASIC1.08□□□□□ -2.24
SftpdP50404 Gm7258-201ENSMUST00000179317 300 ntBASIC1.08□□□□□ -2.24
SftpdP50404 Gm42988-201ENSMUST00000198116 225 ntBASIC1.08□□□□□ -2.24
SftpdP50404 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.08□□□□□ -2.24
SftpdP50404 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.08□□□□□ -2.24
SftpdP50404 Snora41-201ENSMUST00000082668 132 ntBASIC1.08□□□□□ -2.24
SftpdP50404 Snora20-201ENSMUST00000082703 128 ntBASIC1.08□□□□□ -2.24
SftpdP50404 Snord82-201ENSMUST00000082889 70 ntBASIC1.08□□□□□ -2.24
SftpdP50404 Gm22744-201ENSMUST00000083444 65 ntBASIC1.08□□□□□ -2.24
SftpdP50404 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.08□□□□□ -2.24
SftpdP50404 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
SftpdP50404 Gm13922-201ENSMUST00000119505 156 ntBASIC1.07□□□□□ -2.24
SftpdP50404 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.07□□□□□ -2.24
SftpdP50404 Mir1904-201ENSMUST00000122702 80 ntBASIC1.07□□□□□ -2.24
SftpdP50404 Gm25828-201ENSMUST00000157087 95 ntBASIC1.07□□□□□ -2.24
SftpdP50404 Gm26415-201ENSMUST00000157673 292 ntBASIC1.07□□□□□ -2.24
SftpdP50404 Gm25768-201ENSMUST00000158570 98 ntBASIC1.07□□□□□ -2.24
SftpdP50404 Gm26426-201ENSMUST00000177866 123 ntBASIC1.07□□□□□ -2.24
SftpdP50404 Gm26060-201ENSMUST00000180094 123 ntBASIC1.07□□□□□ -2.24
SftpdP50404 Gm27420-201ENSMUST00000183823 79 ntBASIC1.07□□□□□ -2.24
SftpdP50404 Gm45544-201ENSMUST00000211130 88 ntBASIC1.07□□□□□ -2.24
SftpdP50404 Gm25895-201ENSMUST00000083714 100 ntBASIC1.07□□□□□ -2.24
SftpdP50404 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.06□□□□□ -2.24
SftpdP50404 Gm22551-201ENSMUST00000157795 103 ntBASIC1.06□□□□□ -2.24
SftpdP50404 Gm43911-201ENSMUST00000203097 76 ntBASIC1.06□□□□□ -2.24
SftpdP50404 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.06□□□□□ -2.24
SftpdP50404 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.06□□□□□ -2.24
SftpdP50404 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.06□□□□□ -2.24
SftpdP50404 Gm22704-201ENSMUST00000083027 137 ntBASIC1.06□□□□□ -2.24
SftpdP50404 Gm24867-201ENSMUST00000104161 107 ntBASIC1.05□□□□□ -2.24
SftpdP50404 Mir654-201ENSMUST00000104787 84 ntBASIC1.05□□□□□ -2.24
SftpdP50404 Gm14568-201ENSMUST00000119321 294 ntBASIC1.05□□□□□ -2.24
SftpdP50404 Gm24808-201ENSMUST00000157993 118 ntBASIC1.05□□□□□ -2.24
SftpdP50404 Gm25011-201ENSMUST00000158398 126 ntBASIC1.05□□□□□ -2.24
SftpdP50404 Gm22944-201ENSMUST00000158662 133 ntBASIC1.05□□□□□ -2.24
SftpdP50404 Gm24154-201ENSMUST00000175261 130 ntBASIC1.05□□□□□ -2.24
SftpdP50404 Gm28256-201ENSMUST00000188953 139 ntBASIC1.05□□□□□ -2.24
SftpdP50404 Gm28559-201ENSMUST00000190532 139 ntBASIC1.05□□□□□ -2.24
SftpdP50404 Gm45268-201ENSMUST00000210046 370 ntBASIC1.05□□□□□ -2.24
SftpdP50404 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.05□□□□□ -2.24
SftpdP50404 Gm24221-201ENSMUST00000158833 313 ntBASIC1.04□□□□□ -2.24
SftpdP50404 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.04□□□□□ -2.24
SftpdP50404 Gm44320-201ENSMUST00000199276 86 ntBASIC1.04□□□□□ -2.24
SftpdP50404 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.04□□□□□ -2.24
SftpdP50404 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
SftpdP50404 Gm6952-201ENSMUST00000118629 159 ntBASIC1.03□□□□□ -2.24
SftpdP50404 Gm22200-201ENSMUST00000158614 67 ntBASIC1.03□□□□□ -2.24
SftpdP50404 Gm24880-201ENSMUST00000158776 85 ntBASIC1.03□□□□□ -2.24
SftpdP50404 Gm25838-201ENSMUST00000158920 120 ntBASIC1.03□□□□□ -2.24
SftpdP50404 Gm44464-201ENSMUST00000198010 138 ntBASIC1.03□□□□□ -2.24
SftpdP50404 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.03□□□□□ -2.24
SftpdP50404 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.03□□□□□ -2.24
SftpdP50404 Gm25851-201ENSMUST00000082794 107 ntBASIC1.03□□□□□ -2.24
SftpdP50404 Gm24942-201ENSMUST00000158328 114 ntBASIC1.02□□□□□ -2.25
SftpdP50404 Gm25834-201ENSMUST00000158916 101 ntBASIC1.02□□□□□ -2.25
SftpdP50404 Gm27672-201ENSMUST00000183751 204 ntBASIC1.02□□□□□ -2.25
SftpdP50404 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.02□□□□□ -2.25
SftpdP50404 Gm25482-201ENSMUST00000083225 107 ntBASIC1.02□□□□□ -2.25
SftpdP50404 Mir451a-201ENSMUST00000093557 72 ntBASIC1.02□□□□□ -2.25
SftpdP50404 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.01□□□□□ -2.25
SftpdP50404 Gm23130-201ENSMUST00000104252 74 ntBASIC1.01□□□□□ -2.25
SftpdP50404 Snord100-201ENSMUST00000116836 74 ntBASIC1.01□□□□□ -2.25
SftpdP50404 Gm12771-201ENSMUST00000120246 135 ntBASIC1.01□□□□□ -2.25
SftpdP50404 Gm23329-201ENSMUST00000157415 108 ntBASIC1.01□□□□□ -2.25
SftpdP50404 Gm26090-201ENSMUST00000157897 128 ntBASIC1.01□□□□□ -2.25
SftpdP50404 Gm25223-201ENSMUST00000158200 110 ntBASIC1.01□□□□□ -2.25
SftpdP50404 Gm26160-201ENSMUST00000158965 63 ntBASIC1.01□□□□□ -2.25
SftpdP50404 Gm27365-201ENSMUST00000184041 177 ntBASIC1.01□□□□□ -2.25
SftpdP50404 Gm43898-201ENSMUST00000204456 424 ntBASIC1.01□□□□□ -2.25
SftpdP50404 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
SftpdP50404 Gm14567-201ENSMUST00000117155 174 ntBASIC1□□□□□ -2.25
SftpdP50404 Gm24401-201ENSMUST00000157868 91 ntBASIC1□□□□□ -2.25
SftpdP50404 Gm23760-201ENSMUST00000158350 116 ntBASIC1□□□□□ -2.25
SftpdP50404 Gm23714-201ENSMUST00000179259 105 ntBASIC1□□□□□ -2.25
SftpdP50404 Mir6380-201ENSMUST00000184334 81 ntBASIC1□□□□□ -2.25
SftpdP50404 Mir7059-201ENSMUST00000184825 59 ntBASIC1□□□□□ -2.25
SftpdP50404 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1□□□□□ -2.25
SftpdP50404 Gm19790-201ENSMUST00000214414 251 ntBASIC1□□□□□ -2.25
SftpdP50404 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SftpdP50404 Gm23901-201ENSMUST00000157570 107 ntBASIC0.99□□□□□ -2.25
SftpdP50404 Gm25771-201ENSMUST00000158565 144 ntBASIC0.99□□□□□ -2.25
SftpdP50404 Gm16539-201ENSMUST00000160086 327 ntBASIC0.99□□□□□ -2.25
SftpdP50404 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.99□□□□□ -2.25
SftpdP50404 Gm25128-201ENSMUST00000083339 76 ntBASIC0.99□□□□□ -2.25
SftpdP50404 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.98□□□□□ -2.25
SftpdP50404 Gm24276-201ENSMUST00000102181 110 ntBASIC0.98□□□□□ -2.25
SftpdP50404 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
SftpdP50404 Gm24729-201ENSMUST00000158225 137 ntBASIC0.98□□□□□ -2.25
SftpdP50404 Gm27974-201ENSMUST00000183415 105 ntBASIC0.98□□□□□ -2.25
SftpdP50404 Gm38364-201ENSMUST00000191814 179 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms