Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm25401-201ENSMUST00000082975 106 ntBASIC1.62□□□□□ -2.15
Ercc3P49135 Mir302d-201ENSMUST00000083513 66 ntBASIC1.62□□□□□ -2.15
Ercc3P49135 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.62□□□□□ -2.15
Ercc3P49135 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Ercc3P49135 Gm22785-201ENSMUST00000104087 132 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 Gm11857-201ENSMUST00000119817 324 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 Gm11334-201ENSMUST00000121969 156 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 Gm24915-201ENSMUST00000157288 78 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 Gm25558-201ENSMUST00000158083 106 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 Gm23221-201ENSMUST00000158118 93 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 Gm27894-201ENSMUST00000184177 92 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 Gm28669-201ENSMUST00000188400 100 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 Gm37624-201ENSMUST00000193751 219 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 Snord47-201ENSMUST00000083034 77 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 Gm22743-201ENSMUST00000083445 133 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 BC022960-201ENSMUST00000119987 1815 ntBASIC1.61□□□□□ -2.15
Ercc3P49135 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Ercc3P49135 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.6□□□□□ -2.15
Ercc3P49135 Gm22228-201ENSMUST00000157364 101 ntBASIC1.6□□□□□ -2.15
Ercc3P49135 Gm27711-201ENSMUST00000183802 118 ntBASIC1.6□□□□□ -2.15
Ercc3P49135 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Ercc3P49135 Gm24276-201ENSMUST00000102181 110 ntBASIC1.59□□□□□ -2.15
Ercc3P49135 Gm11856-201ENSMUST00000118712 276 ntBASIC1.59□□□□□ -2.15
Ercc3P49135 Mir211-201ENSMUST00000083651 106 ntBASIC1.59□□□□□ -2.15
Ercc3P49135 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Ercc3P49135 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Ercc3P49135 Gm25323-201ENSMUST00000122555 103 ntBASIC1.58□□□□□ -2.16
Ercc3P49135 Gm25828-201ENSMUST00000157087 95 ntBASIC1.58□□□□□ -2.16
Ercc3P49135 Gm26160-201ENSMUST00000158965 63 ntBASIC1.58□□□□□ -2.16
Ercc3P49135 Mir3968-201ENSMUST00000175355 100 ntBASIC1.58□□□□□ -2.16
Ercc3P49135 Mir3098-201ENSMUST00000175416 87 ntBASIC1.58□□□□□ -2.16
Ercc3P49135 Gm16399-201ENSMUST00000181423 219 ntBASIC1.58□□□□□ -2.16
Ercc3P49135 Mir7063-201ENSMUST00000184158 91 ntBASIC1.58□□□□□ -2.16
Ercc3P49135 Mir186-201ENSMUST00000083497 71 ntBASIC1.58□□□□□ -2.16
Ercc3P49135 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.58□□□□□ -2.16
Ercc3P49135 Gm25650-201ENSMUST00000083784 162 ntBASIC1.58□□□□□ -2.16
Ercc3P49135 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.58□□□□□ -2.16
Ercc3P49135 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.57□□□□□ -2.16
Ercc3P49135 Gm14923-201ENSMUST00000118270 155 ntBASIC1.57□□□□□ -2.16
Ercc3P49135 Gm25985-201ENSMUST00000122677 107 ntBASIC1.57□□□□□ -2.16
Ercc3P49135 Gm22163-201ENSMUST00000158408 135 ntBASIC1.57□□□□□ -2.16
Ercc3P49135 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Ercc3P49135 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.56□□□□□ -2.16
Ercc3P49135 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.56□□□□□ -2.16
Ercc3P49135 Snord72-201ENSMUST00000104549 81 ntBASIC1.56□□□□□ -2.16
Ercc3P49135 Gm6952-201ENSMUST00000118629 159 ntBASIC1.56□□□□□ -2.16
Ercc3P49135 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.56□□□□□ -2.16
Ercc3P49135 Gm22989-201ENSMUST00000158313 86 ntBASIC1.56□□□□□ -2.16
Ercc3P49135 Gm23209-201ENSMUST00000158667 110 ntBASIC1.56□□□□□ -2.16
Ercc3P49135 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Ercc3P49135 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.55□□□□□ -2.16
Ercc3P49135 Mir343-201ENSMUST00000102360 75 ntBASIC1.55□□□□□ -2.16
Ercc3P49135 Gm13246-201ENSMUST00000120994 315 ntBASIC1.55□□□□□ -2.16
Ercc3P49135 Gm24750-201ENSMUST00000157843 104 ntBASIC1.55□□□□□ -2.16
Ercc3P49135 Gm22888-201ENSMUST00000158640 77 ntBASIC1.55□□□□□ -2.16
Ercc3P49135 Gm22663-201ENSMUST00000158721 102 ntBASIC1.55□□□□□ -2.16
Ercc3P49135 Gm20391-201ENSMUST00000174722 106 ntBASIC1.55□□□□□ -2.16
Ercc3P49135 Gm37997-201ENSMUST00000193515 267 ntBASIC1.55□□□□□ -2.16
Ercc3P49135 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.55□□□□□ -2.16
Ercc3P49135 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.55□□□□□ -2.16
Ercc3P49135 Gm22973-201ENSMUST00000083298 191 ntBASIC1.55□□□□□ -2.16
Ercc3P49135 Gm24588-201ENSMUST00000116696 83 ntBASIC1.54□□□□□ -2.16
Ercc3P49135 Gm23996-201ENSMUST00000158062 131 ntBASIC1.54□□□□□ -2.16
Ercc3P49135 Gm26213-201ENSMUST00000158582 110 ntBASIC1.54□□□□□ -2.16
Ercc3P49135 Gm22476-201ENSMUST00000158902 100 ntBASIC1.54□□□□□ -2.16
Ercc3P49135 Gm23419-201ENSMUST00000175523 84 ntBASIC1.54□□□□□ -2.16
Ercc3P49135 Mir6240-201ENSMUST00000184281 117 ntBASIC1.54□□□□□ -2.16
Ercc3P49135 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Ercc3P49135 Gm19790-201ENSMUST00000214414 251 ntBASIC1.54□□□□□ -2.16
Ercc3P49135 Gm26224-201ENSMUST00000082506 80 ntBASIC1.54□□□□□ -2.16
Ercc3P49135 Gm23245-201ENSMUST00000083370 135 ntBASIC1.54□□□□□ -2.16
Ercc3P49135 Gm25409-201ENSMUST00000083764 131 ntBASIC1.54□□□□□ -2.16
Ercc3P49135 Gm15069-201ENSMUST00000117792 192 ntBASIC1.53□□□□□ -2.16
Ercc3P49135 Gm15068-201ENSMUST00000119796 192 ntBASIC1.53□□□□□ -2.16
Ercc3P49135 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.53□□□□□ -2.16
Ercc3P49135 Gm26415-201ENSMUST00000157673 292 ntBASIC1.53□□□□□ -2.16
Ercc3P49135 Gm22337-201ENSMUST00000157721 132 ntBASIC1.53□□□□□ -2.16
Ercc3P49135 Gm23339-201ENSMUST00000158962 139 ntBASIC1.53□□□□□ -2.16
Ercc3P49135 Mir6481-201ENSMUST00000184617 110 ntBASIC1.53□□□□□ -2.16
Ercc3P49135 Gm38364-201ENSMUST00000191814 179 ntBASIC1.53□□□□□ -2.16
Ercc3P49135 Gm44358-201ENSMUST00000196301 98 ntBASIC1.53□□□□□ -2.16
Ercc3P49135 Gm44464-201ENSMUST00000198010 138 ntBASIC1.53□□□□□ -2.16
Ercc3P49135 Snord80-202ENSMUST00000199023 77 ntBASIC1.53□□□□□ -2.16
Ercc3P49135 Gm25855-201ENSMUST00000082787 72 ntBASIC1.53□□□□□ -2.16
Ercc3P49135 Gm26074-201ENSMUST00000104063 129 ntBASIC1.52□□□□□ -2.17
Ercc3P49135 Gm24171-201ENSMUST00000104126 131 ntBASIC1.52□□□□□ -2.17
Ercc3P49135 Gm22557-201ENSMUST00000157804 102 ntBASIC1.52□□□□□ -2.17
Ercc3P49135 Mir7059-201ENSMUST00000184825 59 ntBASIC1.52□□□□□ -2.17
Ercc3P49135 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.52□□□□□ -2.17
Ercc3P49135 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ercc3P49135 Gm22149-201ENSMUST00000104442 136 ntBASIC1.51□□□□□ -2.17
Ercc3P49135 Gm24559-201ENSMUST00000157519 121 ntBASIC1.51□□□□□ -2.17
Ercc3P49135 Gm24345-201ENSMUST00000158706 124 ntBASIC1.51□□□□□ -2.17
Ercc3P49135 Gm24154-201ENSMUST00000175261 130 ntBASIC1.51□□□□□ -2.17
Ercc3P49135 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.51□□□□□ -2.17
Ercc3P49135 Gm25878-201ENSMUST00000104327 93 ntBASIC1.5□□□□□ -2.17
Ercc3P49135 Mir880-201ENSMUST00000104809 78 ntBASIC1.5□□□□□ -2.17
Ercc3P49135 Gm14671-201ENSMUST00000121790 262 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms