Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.24□□□□□ -2.45
Cdx2P43241 Gm22791-201ENSMUST00000157232 145 ntBASIC-0.24□□□□□ -2.45
Cdx2P43241 Gm23536-201ENSMUST00000157541 134 ntBASIC-0.24□□□□□ -2.45
Cdx2P43241 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.24□□□□□ -2.45
Cdx2P43241 Mir465d-201ENSMUST00000196314 58 ntBASIC-0.24□□□□□ -2.45
Cdx2P43241 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC-0.24□□□□□ -2.45
Cdx2P43241 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.24□□□□□ -2.45
Cdx2P43241 AC116589.4-201ENSMUST00000222390 216 ntBASIC-0.24□□□□□ -2.45
Cdx2P43241 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.24□□□□□ -2.45
Cdx2P43241 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.24□□□□□ -2.45
Cdx2P43241 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.24□□□□□ -2.45
Cdx2P43241 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.25□□□□□ -2.45
Cdx2P43241 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.25□□□□□ -2.45
Cdx2P43241 Gm28648-201ENSMUST00000190092 343 ntBASIC-0.25□□□□□ -2.45
Cdx2P43241 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC-0.25□□□□□ -2.45
Cdx2P43241 AC132437.1-201ENSMUST00000218308 320 ntBASIC-0.25□□□□□ -2.45
Cdx2P43241 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.25□□□□□ -2.45
Cdx2P43241 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
Cdx2P43241 Gm26393-201ENSMUST00000157625 129 ntBASIC-0.26□□□□□ -2.45
Cdx2P43241 Gm25494-201ENSMUST00000158143 100 ntBASIC-0.26□□□□□ -2.45
Cdx2P43241 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.26□□□□□ -2.45
Cdx2P43241 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-0.26□□□□□ -2.45
Cdx2P43241 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.26□□□□□ -2.45
Cdx2P43241 AC145736.2-201ENSMUST00000216305 365 ntBASIC-0.26□□□□□ -2.45
Cdx2P43241 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.26□□□□□ -2.45
Cdx2P43241 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.26□□□□□ -2.45
Cdx2P43241 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.26□□□□□ -2.45
Cdx2P43241 Gm12771-201ENSMUST00000120246 135 ntBASIC-0.27□□□□□ -2.45
Cdx2P43241 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.27□□□□□ -2.45
Cdx2P43241 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.27□□□□□ -2.45
Cdx2P43241 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.27□□□□□ -2.45
Cdx2P43241 Gm26217-201ENSMUST00000175212 84 ntBASIC-0.27□□□□□ -2.45
Cdx2P43241 Mir100-201ENSMUST00000175270 80 ntBASIC-0.27□□□□□ -2.45
Cdx2P43241 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.27□□□□□ -2.45
Cdx2P43241 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.27□□□□□ -2.45
Cdx2P43241 Gm13720-201ENSMUST00000120741 196 ntBASIC-0.28□□□□□ -2.45
Cdx2P43241 Gm12785-201ENSMUST00000122052 172 ntBASIC-0.28□□□□□ -2.45
Cdx2P43241 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.28□□□□□ -2.45
Cdx2P43241 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.28□□□□□ -2.45
Cdx2P43241 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.28□□□□□ -2.45
Cdx2P43241 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.28□□□□□ -2.45
Cdx2P43241 AC125311.1-201ENSMUST00000226950 220 ntBASIC-0.28□□□□□ -2.45
Cdx2P43241 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.29□□□□□ -2.46
Cdx2P43241 Gm14574-201ENSMUST00000120644 279 ntBASIC-0.29□□□□□ -2.46
Cdx2P43241 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.29□□□□□ -2.46
Cdx2P43241 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.29□□□□□ -2.46
Cdx2P43241 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
Cdx2P43241 Gm26400-201ENSMUST00000175012 85 ntBASIC-0.29□□□□□ -2.46
Cdx2P43241 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.29□□□□□ -2.46
Cdx2P43241 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.29□□□□□ -2.46
Cdx2P43241 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.29□□□□□ -2.46
Cdx2P43241 Gm44464-201ENSMUST00000198010 138 ntBASIC-0.29□□□□□ -2.46
Cdx2P43241 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.29□□□□□ -2.46
Cdx2P43241 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
Cdx2P43241 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 Gm22387-201ENSMUST00000158191 131 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 Gm23474-201ENSMUST00000158884 75 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 Cfap61-214ENSMUST00000167179 183 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 AC154484.1-201ENSMUST00000227311 771 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 Gm26495-201ENSMUST00000083152 137 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 Mir377-201ENSMUST00000083504 68 ntBASIC-0.3□□□□□ -2.46
Cdx2P43241 Gm25102-201ENSMUST00000122479 112 ntBASIC-0.31□□□□□ -2.46
Cdx2P43241 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.31□□□□□ -2.46
Cdx2P43241 Gm24810-201ENSMUST00000175317 70 ntBASIC-0.31□□□□□ -2.46
Cdx2P43241 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.31□□□□□ -2.46
Cdx2P43241 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
Cdx2P43241 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.31□□□□□ -2.46
Cdx2P43241 Mir18-201ENSMUST00000083469 96 ntBASIC-0.31□□□□□ -2.46
Cdx2P43241 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.32□□□□□ -2.46
Cdx2P43241 Gm22199-201ENSMUST00000122660 126 ntBASIC-0.32□□□□□ -2.46
Cdx2P43241 Gm24504-201ENSMUST00000157679 100 ntBASIC-0.32□□□□□ -2.46
Cdx2P43241 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.32□□□□□ -2.46
Cdx2P43241 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.32□□□□□ -2.46
Cdx2P43241 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.32□□□□□ -2.46
Cdx2P43241 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.32□□□□□ -2.46
Cdx2P43241 AC164297.5-201ENSMUST00000224365 198 ntBASIC-0.32□□□□□ -2.46
Cdx2P43241 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.32□□□□□ -2.46
Cdx2P43241 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
Cdx2P43241 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.33□□□□□ -2.46
Cdx2P43241 Gm24499-201ENSMUST00000158446 104 ntBASIC-0.33□□□□□ -2.46
Cdx2P43241 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.33□□□□□ -2.46
Cdx2P43241 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.33□□□□□ -2.46
Cdx2P43241 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.33□□□□□ -2.46
Cdx2P43241 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.33□□□□□ -2.46
Cdx2P43241 Gm23614-201ENSMUST00000082598 107 ntBASIC-0.33□□□□□ -2.46
Cdx2P43241 Snora75-201ENSMUST00000082903 133 ntBASIC-0.33□□□□□ -2.46
Cdx2P43241 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.33□□□□□ -2.46
Cdx2P43241 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.34□□□□□ -2.46
Cdx2P43241 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
Cdx2P43241 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.34□□□□□ -2.46
Cdx2P43241 Gm38183-201ENSMUST00000193189 205 ntBASIC-0.34□□□□□ -2.46
Cdx2P43241 Gm29818-201ENSMUST00000218070 165 ntBASIC-0.34□□□□□ -2.46
Cdx2P43241 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.34□□□□□ -2.46
Cdx2P43241 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 159.4 ms