Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Gm23267-201ENSMUST00000178490 132 ntBASIC1.52□□□□□ -2.17
RxraP28700 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.52□□□□□ -2.17
RxraP28700 Gm44921-201ENSMUST00000205290 301 ntBASIC1.52□□□□□ -2.17
RxraP28700 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
RxraP28700 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.51□□□□□ -2.17
RxraP28700 Gm25428-201ENSMUST00000157608 114 ntBASIC1.51□□□□□ -2.17
RxraP28700 Gm25464-201ENSMUST00000175481 107 ntBASIC1.51□□□□□ -2.17
RxraP28700 Gm16404-201ENSMUST00000177739 468 ntBASIC1.51□□□□□ -2.17
RxraP28700 Gm14598-201ENSMUST00000180109 468 ntBASIC1.51□□□□□ -2.17
RxraP28700 Gm14625-201ENSMUST00000180231 468 ntBASIC1.51□□□□□ -2.17
RxraP28700 Mir3087-201ENSMUST00000199405 56 ntBASIC1.51□□□□□ -2.17
RxraP28700 Gm24523-201ENSMUST00000083965 132 ntBASIC1.51□□□□□ -2.17
RxraP28700 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.51□□□□□ -2.17
RxraP28700 Gm22148-201ENSMUST00000104445 107 ntBASIC1.5□□□□□ -2.17
RxraP28700 Gm15115-201ENSMUST00000121145 264 ntBASIC1.5□□□□□ -2.17
RxraP28700 Gm22477-201ENSMUST00000122569 316 ntBASIC1.5□□□□□ -2.17
RxraP28700 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.5□□□□□ -2.17
RxraP28700 Gm25558-201ENSMUST00000158083 106 ntBASIC1.5□□□□□ -2.17
RxraP28700 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC1.5□□□□□ -2.17
RxraP28700 Gm26097-201ENSMUST00000179642 93 ntBASIC1.5□□□□□ -2.17
RxraP28700 Gm44962-201ENSMUST00000206460 279 ntBASIC1.5□□□□□ -2.17
RxraP28700 Gm44922-201ENSMUST00000206690 90 ntBASIC1.5□□□□□ -2.17
RxraP28700 Gm45544-201ENSMUST00000211130 88 ntBASIC1.5□□□□□ -2.17
RxraP28700 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.5□□□□□ -2.17
RxraP28700 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.5□□□□□ -2.17
RxraP28700 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
RxraP28700 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.5□□□□□ -2.17
RxraP28700 BC022960-201ENSMUST00000119987 1815 ntBASIC1.5□□□□□ -2.17
RxraP28700 Gm24171-201ENSMUST00000104126 131 ntBASIC1.49□□□□□ -2.17
RxraP28700 Gm6952-201ENSMUST00000118629 159 ntBASIC1.49□□□□□ -2.17
RxraP28700 Gm13345-201ENSMUST00000121928 228 ntBASIC1.49□□□□□ -2.17
RxraP28700 Gm24915-201ENSMUST00000157288 78 ntBASIC1.49□□□□□ -2.17
RxraP28700 Gm22557-201ENSMUST00000157804 102 ntBASIC1.49□□□□□ -2.17
RxraP28700 Gm25716-201ENSMUST00000158628 104 ntBASIC1.49□□□□□ -2.17
RxraP28700 Gm29603-201ENSMUST00000186792 334 ntBASIC1.49□□□□□ -2.17
RxraP28700 Gm44483-201ENSMUST00000197203 97 ntBASIC1.49□□□□□ -2.17
RxraP28700 Gm43749-201ENSMUST00000199345 352 ntBASIC1.49□□□□□ -2.17
RxraP28700 Mir320-201ENSMUST00000083594 82 ntBASIC1.49□□□□□ -2.17
RxraP28700 Gm23766-201ENSMUST00000103894 80 ntBASIC1.48□□□□□ -2.17
RxraP28700 Gm22785-201ENSMUST00000104087 132 ntBASIC1.48□□□□□ -2.17
RxraP28700 Gm24895-201ENSMUST00000122742 74 ntBASIC1.48□□□□□ -2.17
RxraP28700 Mir21b-201ENSMUST00000184317 108 ntBASIC1.48□□□□□ -2.17
RxraP28700 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.48□□□□□ -2.17
RxraP28700 Gm25855-201ENSMUST00000082787 72 ntBASIC1.48□□□□□ -2.17
RxraP28700 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
RxraP28700 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
RxraP28700 Snord13-201ENSMUST00000157627 104 ntBASIC1.47□□□□□ -2.17
RxraP28700 Gm26415-201ENSMUST00000157673 292 ntBASIC1.47□□□□□ -2.17
RxraP28700 Gm24000-201ENSMUST00000158063 89 ntBASIC1.47□□□□□ -2.17
RxraP28700 Gm24345-201ENSMUST00000158706 124 ntBASIC1.47□□□□□ -2.17
RxraP28700 Gm26160-201ENSMUST00000158965 63 ntBASIC1.47□□□□□ -2.17
RxraP28700 Traj60-201ENSMUST00000167781 54 ntBASIC1.47□□□□□ -2.17
RxraP28700 Gm22862-201ENSMUST00000178593 121 ntBASIC1.47□□□□□ -2.17
RxraP28700 Gm18213-201ENSMUST00000207850 178 ntBASIC1.47□□□□□ -2.17
RxraP28700 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.47□□□□□ -2.17
RxraP28700 Gm16976-205ENSMUST00000227324 226 ntBASIC1.47□□□□□ -2.17
RxraP28700 Snord96a-201ENSMUST00000082791 81 ntBASIC1.47□□□□□ -2.17
RxraP28700 Gm13922-201ENSMUST00000119505 156 ntBASIC1.46□□□□□ -2.18
RxraP28700 Gm13246-201ENSMUST00000120994 315 ntBASIC1.46□□□□□ -2.18
RxraP28700 Gm25323-201ENSMUST00000122555 103 ntBASIC1.46□□□□□ -2.18
RxraP28700 Gm22963-201ENSMUST00000157960 91 ntBASIC1.46□□□□□ -2.18
RxraP28700 Gm16546-201ENSMUST00000159442 355 ntBASIC1.46□□□□□ -2.18
RxraP28700 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
RxraP28700 Mir8116-201ENSMUST00000184134 97 ntBASIC1.46□□□□□ -2.18
RxraP28700 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.46□□□□□ -2.18
RxraP28700 AC158982.2-201ENSMUST00000226283 184 ntBASIC1.46□□□□□ -2.18
RxraP28700 Gm25081-201ENSMUST00000082534 108 ntBASIC1.46□□□□□ -2.18
RxraP28700 Mir186-201ENSMUST00000083497 71 ntBASIC1.46□□□□□ -2.18
RxraP28700 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.46□□□□□ -2.18
RxraP28700 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.46□□□□□ -2.18
RxraP28700 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RxraP28700 Gm23653-201ENSMUST00000116751 97 ntBASIC1.45□□□□□ -2.18
RxraP28700 Gm23558-201ENSMUST00000157823 80 ntBASIC1.45□□□□□ -2.18
RxraP28700 Gm24634-201ENSMUST00000158672 107 ntBASIC1.45□□□□□ -2.18
RxraP28700 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.45□□□□□ -2.18
RxraP28700 Gm44464-201ENSMUST00000198010 138 ntBASIC1.45□□□□□ -2.18
RxraP28700 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.45□□□□□ -2.18
RxraP28700 Gm25878-201ENSMUST00000104327 93 ntBASIC1.44□□□□□ -2.18
RxraP28700 Gm11792-201ENSMUST00000120640 168 ntBASIC1.44□□□□□ -2.18
RxraP28700 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.44□□□□□ -2.18
RxraP28700 Gm25828-201ENSMUST00000157087 95 ntBASIC1.44□□□□□ -2.18
RxraP28700 Gm26403-201ENSMUST00000158500 105 ntBASIC1.44□□□□□ -2.18
RxraP28700 Gm20391-201ENSMUST00000174722 106 ntBASIC1.44□□□□□ -2.18
RxraP28700 Gm22699-201ENSMUST00000175376 105 ntBASIC1.44□□□□□ -2.18
RxraP28700 Gm26073-201ENSMUST00000179906 127 ntBASIC1.44□□□□□ -2.18
RxraP28700 Gm24588-201ENSMUST00000116696 83 ntBASIC1.43□□□□□ -2.18
RxraP28700 Gm15069-201ENSMUST00000117792 192 ntBASIC1.43□□□□□ -2.18
RxraP28700 Gm15068-201ENSMUST00000119796 192 ntBASIC1.43□□□□□ -2.18
RxraP28700 Gm23221-201ENSMUST00000158118 93 ntBASIC1.43□□□□□ -2.18
RxraP28700 Gm23350-201ENSMUST00000158429 103 ntBASIC1.43□□□□□ -2.18
RxraP28700 Mir1966-201ENSMUST00000158807 108 ntBASIC1.43□□□□□ -2.18
RxraP28700 Gm23339-201ENSMUST00000158962 139 ntBASIC1.43□□□□□ -2.18
RxraP28700 Gm42623-201ENSMUST00000197225 379 ntBASIC1.43□□□□□ -2.18
RxraP28700 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.43□□□□□ -2.18
RxraP28700 Gm22283-201ENSMUST00000082556 161 ntBASIC1.43□□□□□ -2.18
RxraP28700 Mir488-201ENSMUST00000093595 109 ntBASIC1.43□□□□□ -2.18
RxraP28700 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
RxraP28700 Mir654-201ENSMUST00000104787 84 ntBASIC1.42□□□□□ -2.18
RxraP28700 Mir1298-201ENSMUST00000116681 98 ntBASIC1.42□□□□□ -2.18
RxraP28700 Gm14882-201ENSMUST00000117216 218 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 163 ms