Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.43□□□□□ -2.34
Lire1P11260 Gm22786-201ENSMUST00000104086 122 ntBASIC0.42□□□□□ -2.34
Lire1P11260 Gm14919-201ENSMUST00000120839 390 ntBASIC0.42□□□□□ -2.34
Lire1P11260 Mir1933-201ENSMUST00000158930 88 ntBASIC0.42□□□□□ -2.34
Lire1P11260 Gm28418-201ENSMUST00000186179 423 ntBASIC0.42□□□□□ -2.34
Lire1P11260 Gm38183-201ENSMUST00000193189 205 ntBASIC0.42□□□□□ -2.34
Lire1P11260 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.42□□□□□ -2.34
Lire1P11260 Snora20-201ENSMUST00000082703 128 ntBASIC0.42□□□□□ -2.34
Lire1P11260 Mir759-201ENSMUST00000103254 98 ntBASIC0.41□□□□□ -2.34
Lire1P11260 Gm25878-201ENSMUST00000104327 93 ntBASIC0.41□□□□□ -2.34
Lire1P11260 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.41□□□□□ -2.34
Lire1P11260 Gm26415-201ENSMUST00000157673 292 ntBASIC0.41□□□□□ -2.34
Lire1P11260 Gm22088-201ENSMUST00000158341 117 ntBASIC0.41□□□□□ -2.34
Lire1P11260 Mir5624-201ENSMUST00000176635 61 ntBASIC0.41□□□□□ -2.34
Lire1P11260 Gm43432-201ENSMUST00000196352 121 ntBASIC0.41□□□□□ -2.34
Lire1P11260 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.41□□□□□ -2.34
Lire1P11260 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Lire1P11260 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.41□□□□□ -2.34
Lire1P11260 Gm24316-201ENSMUST00000083041 107 ntBASIC0.41□□□□□ -2.34
Lire1P11260 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Lire1P11260 Gm23531-201ENSMUST00000104567 68 ntBASIC0.4□□□□□ -2.35
Lire1P11260 Gm23672-201ENSMUST00000157471 107 ntBASIC0.4□□□□□ -2.35
Lire1P11260 Gm26116-201ENSMUST00000175600 77 ntBASIC0.4□□□□□ -2.35
Lire1P11260 Gm44211-201ENSMUST00000204867 145 ntBASIC0.4□□□□□ -2.35
Lire1P11260 Gm45005-201ENSMUST00000206640 157 ntBASIC0.4□□□□□ -2.35
Lire1P11260 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.4□□□□□ -2.35
Lire1P11260 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Lire1P11260 Mir669f-201ENSMUST00000103850 121 ntBASIC0.39□□□□□ -2.35
Lire1P11260 Gm15213-201ENSMUST00000122098 216 ntBASIC0.39□□□□□ -2.35
Lire1P11260 Gm22080-201ENSMUST00000157591 106 ntBASIC0.39□□□□□ -2.35
Lire1P11260 Gm26090-201ENSMUST00000157897 128 ntBASIC0.39□□□□□ -2.35
Lire1P11260 Gm22983-201ENSMUST00000158308 104 ntBASIC0.39□□□□□ -2.35
Lire1P11260 Gm22448-201ENSMUST00000179254 107 ntBASIC0.39□□□□□ -2.35
Lire1P11260 Gm25814-201ENSMUST00000082754 107 ntBASIC0.39□□□□□ -2.35
Lire1P11260 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Lire1P11260 Gm24171-201ENSMUST00000104126 131 ntBASIC0.38□□□□□ -2.35
Lire1P11260 Mir7077-201ENSMUST00000183991 57 ntBASIC0.38□□□□□ -2.35
Lire1P11260 Gm36189-201ENSMUST00000204113 523 ntBASIC0.38□□□□□ -2.35
Lire1P11260 Gm45616-201ENSMUST00000211711 319 ntBASIC0.38□□□□□ -2.35
Lire1P11260 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.38□□□□□ -2.35
Lire1P11260 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Lire1P11260 Gm25875-201ENSMUST00000104323 107 ntBASIC0.37□□□□□ -2.35
Lire1P11260 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.37□□□□□ -2.35
Lire1P11260 Gm44055-201ENSMUST00000204376 247 ntBASIC0.37□□□□□ -2.35
Lire1P11260 Gm43944-201ENSMUST00000205220 120 ntBASIC0.37□□□□□ -2.35
Lire1P11260 Gm24208-201ENSMUST00000082783 135 ntBASIC0.37□□□□□ -2.35
Lire1P11260 Gm26421-201ENSMUST00000104279 132 ntBASIC0.36□□□□□ -2.35
Lire1P11260 Gm23180-201ENSMUST00000158686 125 ntBASIC0.36□□□□□ -2.35
Lire1P11260 Gm22450-201ENSMUST00000179641 107 ntBASIC0.36□□□□□ -2.35
Lire1P11260 Gm25473-201ENSMUST00000180191 107 ntBASIC0.36□□□□□ -2.35
Lire1P11260 Gm27980-201ENSMUST00000184094 169 ntBASIC0.36□□□□□ -2.35
Lire1P11260 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.36□□□□□ -2.35
Lire1P11260 Gm25142-201ENSMUST00000082698 107 ntBASIC0.36□□□□□ -2.35
Lire1P11260 Gm24856-201ENSMUST00000082809 107 ntBASIC0.36□□□□□ -2.35
Lire1P11260 Gm26497-201ENSMUST00000083146 107 ntBASIC0.36□□□□□ -2.35
Lire1P11260 Gm26071-201ENSMUST00000083261 107 ntBASIC0.36□□□□□ -2.35
Lire1P11260 Mir224-201ENSMUST00000083608 82 ntBASIC0.36□□□□□ -2.35
Lire1P11260 Gm24521-201ENSMUST00000083958 107 ntBASIC0.36□□□□□ -2.35
Lire1P11260 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.35□□□□□ -2.35
Lire1P11260 Gm25300-201ENSMUST00000175284 84 ntBASIC0.35□□□□□ -2.35
Lire1P11260 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.35□□□□□ -2.35
Lire1P11260 Mir7227-201ENSMUST00000200408 59 ntBASIC0.35□□□□□ -2.35
Lire1P11260 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.35□□□□□ -2.35
Lire1P11260 Gm25497-201ENSMUST00000104425 132 ntBASIC0.34□□□□□ -2.36
Lire1P11260 Gm25882-201ENSMUST00000157784 85 ntBASIC0.34□□□□□ -2.36
Lire1P11260 Gm45673-201ENSMUST00000210293 358 ntBASIC0.34□□□□□ -2.36
Lire1P11260 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.34□□□□□ -2.36
Lire1P11260 Gm23941-201ENSMUST00000101953 107 ntBASIC0.33□□□□□ -2.36
Lire1P11260 Mir710-201ENSMUST00000102088 110 ntBASIC0.33□□□□□ -2.36
Lire1P11260 Gm26303-201ENSMUST00000116845 119 ntBASIC0.33□□□□□ -2.36
Lire1P11260 Gm13246-201ENSMUST00000120994 315 ntBASIC0.33□□□□□ -2.36
Lire1P11260 Gm23375-201ENSMUST00000175407 83 ntBASIC0.33□□□□□ -2.36
Lire1P11260 Gm37845-201ENSMUST00000194977 355 ntBASIC0.33□□□□□ -2.36
Lire1P11260 Gm42594-201ENSMUST00000199511 246 ntBASIC0.33□□□□□ -2.36
Lire1P11260 Gm45541-201ENSMUST00000210443 54 ntBASIC0.33□□□□□ -2.36
Lire1P11260 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.33□□□□□ -2.36
Lire1P11260 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Lire1P11260 Gm25110-201ENSMUST00000116684 121 ntBASIC0.32□□□□□ -2.36
Lire1P11260 Gm25775-201ENSMUST00000116716 121 ntBASIC0.32□□□□□ -2.36
Lire1P11260 Gm24795-201ENSMUST00000116737 121 ntBASIC0.32□□□□□ -2.36
Lire1P11260 Gm25171-201ENSMUST00000116926 121 ntBASIC0.32□□□□□ -2.36
Lire1P11260 Gm15069-201ENSMUST00000117792 192 ntBASIC0.32□□□□□ -2.36
Lire1P11260 Gm15068-201ENSMUST00000119796 192 ntBASIC0.32□□□□□ -2.36
Lire1P11260 Gm22586-201ENSMUST00000157507 122 ntBASIC0.32□□□□□ -2.36
Lire1P11260 Gm24467-201ENSMUST00000157887 126 ntBASIC0.32□□□□□ -2.36
Lire1P11260 Gm24547-201ENSMUST00000158649 149 ntBASIC0.32□□□□□ -2.36
Lire1P11260 Gm26159-201ENSMUST00000158968 104 ntBASIC0.32□□□□□ -2.36
Lire1P11260 Gm44468-201ENSMUST00000199516 105 ntBASIC0.32□□□□□ -2.36
Lire1P11260 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.32□□□□□ -2.36
Lire1P11260 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.32□□□□□ -2.36
Lire1P11260 Gm23969-201ENSMUST00000083324 74 ntBASIC0.32□□□□□ -2.36
Lire1P11260 Gm11420-201ENSMUST00000120047 402 ntBASIC0.31□□□□□ -2.36
Lire1P11260 Gm24476-201ENSMUST00000157437 131 ntBASIC0.31□□□□□ -2.36
Lire1P11260 Gm24015-201ENSMUST00000157725 232 ntBASIC0.31□□□□□ -2.36
Lire1P11260 Gm26482-201ENSMUST00000158015 62 ntBASIC0.31□□□□□ -2.36
Lire1P11260 Gm23994-201ENSMUST00000158059 88 ntBASIC0.31□□□□□ -2.36
Lire1P11260 Gm24549-201ENSMUST00000158647 139 ntBASIC0.31□□□□□ -2.36
Lire1P11260 Gm24634-201ENSMUST00000158672 107 ntBASIC0.31□□□□□ -2.36
Lire1P11260 Gm22466-201ENSMUST00000175278 69 ntBASIC0.31□□□□□ -2.36
Lire1P11260 Gm22887-201ENSMUST00000178586 107 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms