Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm23336-201ENSMUST00000117023 123 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm13560-201ENSMUST00000121865 329 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Mir28b-201ENSMUST00000175399 80 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Mir6402-201ENSMUST00000183406 80 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Mir7059-201ENSMUST00000184825 59 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm43381-201ENSMUST00000198553 165 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm44976-201ENSMUST00000205543 261 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm25589-201ENSMUST00000082502 166 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm22738-201ENSMUST00000083440 147 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col3a1P08121 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col3a1P08121 Gm11644-201ENSMUST00000119735 150 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm24595-201ENSMUST00000122501 110 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm26091-201ENSMUST00000122704 82 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.82□□□□□ -2.12
Col3a1P08121 Gm22490-201ENSMUST00000157188 119 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm25623-201ENSMUST00000157216 108 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm22228-201ENSMUST00000157364 101 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm24277-201ENSMUST00000158661 104 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm24877-201ENSMUST00000158779 116 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm23190-201ENSMUST00000180307 64 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm27493-201ENSMUST00000184128 78 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm18665-201ENSMUST00000189783 270 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 AC160962.3-201ENSMUST00000225914 112 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm25199-201ENSMUST00000083095 104 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm23249-201ENSMUST00000083369 161 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Gm22866-201ENSMUST00000083947 177 ntBASIC1.82□□□□□ -2.12
Col3a1P08121 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Col3a1P08121 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.81□□□□□ -2.12
Col3a1P08121 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Col3a1P08121 Gm25882-201ENSMUST00000157784 85 ntBASIC1.81□□□□□ -2.12
Col3a1P08121 Mir3098-201ENSMUST00000175416 87 ntBASIC1.81□□□□□ -2.12
Col3a1P08121 Gm23933-201ENSMUST00000178405 79 ntBASIC1.81□□□□□ -2.12
Col3a1P08121 Mir6995-201ENSMUST00000183658 71 ntBASIC1.81□□□□□ -2.12
Col3a1P08121 Gm21064-202ENSMUST00000190583 278 ntBASIC1.81□□□□□ -2.12
Col3a1P08121 AC147101.2-201ENSMUST00000219756 184 ntBASIC1.81□□□□□ -2.12
Col3a1P08121 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.81□□□□□ -2.12
Col3a1P08121 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.81□□□□□ -2.12
Col3a1P08121 Gm24480-201ENSMUST00000157442 103 ntBASIC1.8□□□□□ -2.12
Col3a1P08121 Gm22382-201ENSMUST00000158185 130 ntBASIC1.8□□□□□ -2.12
Col3a1P08121 Gm25012-201ENSMUST00000158396 164 ntBASIC1.8□□□□□ -2.12
Col3a1P08121 Gm22946-201ENSMUST00000158558 82 ntBASIC1.8□□□□□ -2.12
Col3a1P08121 Gm24842-201ENSMUST00000158681 54 ntBASIC1.8□□□□□ -2.12
Col3a1P08121 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.8□□□□□ -2.12
Col3a1P08121 Mir1954-201ENSMUST00000175595 86 ntBASIC1.8□□□□□ -2.12
Col3a1P08121 Gm42719-201ENSMUST00000197393 355 ntBASIC1.8□□□□□ -2.12
Col3a1P08121 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.8□□□□□ -2.12
Col3a1P08121 Mir1291-201ENSMUST00000199842 117 ntBASIC1.8□□□□□ -2.12
Col3a1P08121 Gm22055-201ENSMUST00000083388 107 ntBASIC1.8□□□□□ -2.12
Col3a1P08121 Snora34-201ENSMUST00000083402 138 ntBASIC1.8□□□□□ -2.12
Col3a1P08121 Mir201-201ENSMUST00000083470 66 ntBASIC1.8□□□□□ -2.12
Col3a1P08121 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.8□□□□□ -2.12
Col3a1P08121 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.8□□□□□ -2.12
Col3a1P08121 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
Col3a1P08121 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.79□□□□□ -2.12
Col3a1P08121 Gm23588-201ENSMUST00000157659 99 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Gm23665-201ENSMUST00000158054 62 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Gm22386-201ENSMUST00000158192 129 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Gm22800-201ENSMUST00000175627 94 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Gm28912-201ENSMUST00000189001 234 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Gm44358-201ENSMUST00000196301 98 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Gm16976-205ENSMUST00000227324 226 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Gm23723-201ENSMUST00000082996 132 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Mir200b-201ENSMUST00000083615 70 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Gm23347-201ENSMUST00000083823 82 ntBASIC1.79□□□□□ -2.12
Col3a1P08121 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Col3a1P08121 Mir343-201ENSMUST00000102360 75 ntBASIC1.78□□□□□ -2.12
Col3a1P08121 Snord100-201ENSMUST00000116836 74 ntBASIC1.78□□□□□ -2.12
Col3a1P08121 Gm25323-201ENSMUST00000122555 103 ntBASIC1.78□□□□□ -2.12
Col3a1P08121 Gm23329-201ENSMUST00000157415 108 ntBASIC1.78□□□□□ -2.12
Col3a1P08121 Gm23817-201ENSMUST00000158449 104 ntBASIC1.78□□□□□ -2.12
Col3a1P08121 Gm44326-201ENSMUST00000198226 101 ntBASIC1.78□□□□□ -2.12
Col3a1P08121 Gm8219-201ENSMUST00000218309 242 ntBASIC1.78□□□□□ -2.12
Col3a1P08121 Gm26265-201ENSMUST00000083277 135 ntBASIC1.78□□□□□ -2.12
Col3a1P08121 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.78□□□□□ -2.12
Col3a1P08121 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Col3a1P08121 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.77□□□□□ -2.13
Col3a1P08121 Gm23907-201ENSMUST00000104595 189 ntBASIC1.77□□□□□ -2.13
Col3a1P08121 Gm43324-201ENSMUST00000197482 289 ntBASIC1.77□□□□□ -2.13
Col3a1P08121 Gm44478-201ENSMUST00000204875 114 ntBASIC1.77□□□□□ -2.13
Col3a1P08121 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.77□□□□□ -2.13
Col3a1P08121 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.77□□□□□ -2.13
Col3a1P08121 Gm22950-201ENSMUST00000082776 107 ntBASIC1.77□□□□□ -2.13
Col3a1P08121 Gm22251-201ENSMUST00000083216 107 ntBASIC1.77□□□□□ -2.13
Col3a1P08121 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Col3a1P08121 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.77□□□□□ -2.13
Col3a1P08121 Gm25044-201ENSMUST00000158603 104 ntBASIC1.76□□□□□ -2.13
Col3a1P08121 Gm20438-201ENSMUST00000174441 329 ntBASIC1.76□□□□□ -2.13
Col3a1P08121 Gm25678-201ENSMUST00000174984 73 ntBASIC1.76□□□□□ -2.13
Col3a1P08121 Gm24813-201ENSMUST00000175310 84 ntBASIC1.76□□□□□ -2.13
Col3a1P08121 Gm5224-201ENSMUST00000183060 350 ntBASIC1.76□□□□□ -2.13
Col3a1P08121 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Col3a1P08121 Gm28169-201ENSMUST00000190342 345 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 161.9 ms