Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm43238-201ENSMUST00000196463 359 ntBASIC-0.28□□□□□ -2.45
CopeO89079 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
CopeO89079 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.28□□□□□ -2.45
CopeO89079 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.28□□□□□ -2.45
CopeO89079 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.28□□□□□ -2.45
CopeO89079 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.28□□□□□ -2.45
CopeO89079 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.28□□□□□ -2.45
CopeO89079 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.29□□□□□ -2.46
CopeO89079 Gm24594-201ENSMUST00000122502 99 ntBASIC-0.29□□□□□ -2.46
CopeO89079 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.29□□□□□ -2.46
CopeO89079 Gm16356-201ENSMUST00000143300 169 ntBASIC-0.29□□□□□ -2.46
CopeO89079 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.29□□□□□ -2.46
CopeO89079 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.29□□□□□ -2.46
CopeO89079 Mir3535-201ENSMUST00000197651 147 ntBASIC-0.29□□□□□ -2.46
CopeO89079 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.29□□□□□ -2.46
CopeO89079 AC131720.2-201ENSMUST00000220420 431 ntBASIC-0.29□□□□□ -2.46
CopeO89079 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.29□□□□□ -2.46
CopeO89079 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
CopeO89079 Gm12647-201ENSMUST00000118977 265 ntBASIC-0.3□□□□□ -2.46
CopeO89079 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.3□□□□□ -2.46
CopeO89079 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.3□□□□□ -2.46
CopeO89079 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
CopeO89079 Gm25929-201ENSMUST00000082784 107 ntBASIC-0.3□□□□□ -2.46
CopeO89079 Gm24453-201ENSMUST00000083346 76 ntBASIC-0.3□□□□□ -2.46
CopeO89079 Gm26111-201ENSMUST00000083969 106 ntBASIC-0.3□□□□□ -2.46
CopeO89079 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.3□□□□□ -2.46
CopeO89079 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.31□□□□□ -2.46
CopeO89079 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.31□□□□□ -2.46
CopeO89079 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.31□□□□□ -2.46
CopeO89079 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.31□□□□□ -2.46
CopeO89079 Gm37763-201ENSMUST00000193445 120 ntBASIC-0.31□□□□□ -2.46
CopeO89079 Gm24035-201ENSMUST00000082867 107 ntBASIC-0.31□□□□□ -2.46
CopeO89079 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
CopeO89079 Gm25414-201ENSMUST00000101814 107 ntBASIC-0.32□□□□□ -2.46
CopeO89079 Mir672-201ENSMUST00000102331 100 ntBASIC-0.32□□□□□ -2.46
CopeO89079 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.32□□□□□ -2.46
CopeO89079 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.32□□□□□ -2.46
CopeO89079 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.32□□□□□ -2.46
CopeO89079 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.32□□□□□ -2.46
CopeO89079 Gm24393-201ENSMUST00000158135 97 ntBASIC-0.32□□□□□ -2.46
CopeO89079 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.32□□□□□ -2.46
CopeO89079 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.32□□□□□ -2.46
CopeO89079 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.32□□□□□ -2.46
CopeO89079 Mir721-201ENSMUST00000200230 88 ntBASIC-0.32□□□□□ -2.46
CopeO89079 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.32□□□□□ -2.46
CopeO89079 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.32□□□□□ -2.46
CopeO89079 Mir377-201ENSMUST00000083504 68 ntBASIC-0.32□□□□□ -2.46
CopeO89079 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.33□□□□□ -2.46
CopeO89079 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.33□□□□□ -2.46
CopeO89079 Gm44959-201ENSMUST00000209127 231 ntBASIC-0.33□□□□□ -2.46
CopeO89079 CT025526.1-201ENSMUST00000217327 267 ntBASIC-0.33□□□□□ -2.46
CopeO89079 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.33□□□□□ -2.46
CopeO89079 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.33□□□□□ -2.46
CopeO89079 Mir18-201ENSMUST00000083469 96 ntBASIC-0.33□□□□□ -2.46
CopeO89079 Gm13801-201ENSMUST00000120750 160 ntBASIC-0.34□□□□□ -2.46
CopeO89079 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.34□□□□□ -2.46
CopeO89079 Gm11834-201ENSMUST00000122257 585 ntBASIC-0.34□□□□□ -2.46
CopeO89079 Gm23982-201ENSMUST00000157141 106 ntBASIC-0.34□□□□□ -2.46
CopeO89079 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.34□□□□□ -2.46
CopeO89079 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.34□□□□□ -2.46
CopeO89079 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.34□□□□□ -2.46
CopeO89079 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.34□□□□□ -2.46
CopeO89079 Snora19-201ENSMUST00000082962 132 ntBASIC-0.34□□□□□ -2.46
CopeO89079 Gm23658-201ENSMUST00000083233 132 ntBASIC-0.34□□□□□ -2.46
CopeO89079 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.34□□□□□ -2.46
CopeO89079 Gm23262-201ENSMUST00000158323 168 ntBASIC-0.35□□□□□ -2.47
CopeO89079 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.35□□□□□ -2.47
CopeO89079 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.35□□□□□ -2.47
CopeO89079 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.35□□□□□ -2.47
CopeO89079 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.35□□□□□ -2.47
CopeO89079 Gm43624-201ENSMUST00000197368 180 ntBASIC-0.35□□□□□ -2.47
CopeO89079 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
CopeO89079 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.35□□□□□ -2.47
CopeO89079 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.36□□□□□ -2.47
CopeO89079 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.36□□□□□ -2.47
CopeO89079 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.36□□□□□ -2.47
CopeO89079 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.36□□□□□ -2.47
CopeO89079 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.36□□□□□ -2.47
CopeO89079 Gm22553-201ENSMUST00000157797 295 ntBASIC-0.36□□□□□ -2.47
CopeO89079 Gm23640-201ENSMUST00000157860 104 ntBASIC-0.36□□□□□ -2.47
CopeO89079 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.36□□□□□ -2.47
CopeO89079 Gm38050-201ENSMUST00000191904 238 ntBASIC-0.36□□□□□ -2.47
CopeO89079 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.36□□□□□ -2.47
CopeO89079 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.36□□□□□ -2.47
CopeO89079 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.36□□□□□ -2.47
CopeO89079 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
CopeO89079 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.37□□□□□ -2.47
CopeO89079 Gm25827-201ENSMUST00000157089 107 ntBASIC-0.37□□□□□ -2.47
CopeO89079 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.37□□□□□ -2.47
CopeO89079 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.37□□□□□ -2.47
CopeO89079 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.37□□□□□ -2.47
CopeO89079 Gm37338-201ENSMUST00000191986 127 ntBASIC-0.37□□□□□ -2.47
CopeO89079 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.37□□□□□ -2.47
CopeO89079 Gm24204-201ENSMUST00000082950 107 ntBASIC-0.37□□□□□ -2.47
CopeO89079 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.37□□□□□ -2.47
CopeO89079 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.38□□□□□ -2.47
CopeO89079 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.38□□□□□ -2.47
CopeO89079 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.38□□□□□ -2.47
CopeO89079 Gm42606-201ENSMUST00000114209 239 ntBASIC-0.38□□□□□ -2.47
CopeO89079 Gm25982-201ENSMUST00000157920 101 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms