Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm26160-201ENSMUST00000158965 63 ntBASIC1.05□□□□□ -2.24
Hdac3O88895 Gm27699-201ENSMUST00000183553 180 ntBASIC1.05□□□□□ -2.24
Hdac3O88895 Gm37997-201ENSMUST00000193515 267 ntBASIC1.05□□□□□ -2.24
Hdac3O88895 Gm9251-201ENSMUST00000197202 628 ntBASIC1.05□□□□□ -2.24
Hdac3O88895 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC1.05□□□□□ -2.24
Hdac3O88895 Gm44057-201ENSMUST00000204547 96 ntBASIC1.05□□□□□ -2.24
Hdac3O88895 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.05□□□□□ -2.24
Hdac3O88895 Gm22704-201ENSMUST00000083027 137 ntBASIC1.05□□□□□ -2.24
Hdac3O88895 Gm6952-201ENSMUST00000118629 159 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Gm11792-201ENSMUST00000120640 168 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Mir1931-201ENSMUST00000158589 119 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Gm22476-201ENSMUST00000158902 100 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Gm22348-201ENSMUST00000178674 79 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Gm28669-201ENSMUST00000188400 100 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Gm44464-201ENSMUST00000198010 138 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Gm44922-201ENSMUST00000206690 90 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Mir186-201ENSMUST00000083497 71 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Gm24252-201ENSMUST00000083700 132 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Gm25409-201ENSMUST00000083764 131 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Hdac3O88895 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.04□□□□□ -2.24
Hdac3O88895 Gm24276-201ENSMUST00000102181 110 ntBASIC1.03□□□□□ -2.24
Hdac3O88895 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.03□□□□□ -2.24
Hdac3O88895 Gm25599-201ENSMUST00000157816 103 ntBASIC1.03□□□□□ -2.24
Hdac3O88895 Gm26029-201ENSMUST00000158659 132 ntBASIC1.03□□□□□ -2.24
Hdac3O88895 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.03□□□□□ -2.24
Hdac3O88895 Gm44322-201ENSMUST00000196830 115 ntBASIC1.03□□□□□ -2.24
Hdac3O88895 Gm42623-201ENSMUST00000197225 379 ntBASIC1.03□□□□□ -2.24
Hdac3O88895 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.03□□□□□ -2.24
Hdac3O88895 Gm5002-201ENSMUST00000207145 223 ntBASIC1.03□□□□□ -2.24
Hdac3O88895 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.03□□□□□ -2.24
Hdac3O88895 Gm25855-201ENSMUST00000082787 72 ntBASIC1.03□□□□□ -2.24
Hdac3O88895 Gm25683-201ENSMUST00000083940 131 ntBASIC1.03□□□□□ -2.24
Hdac3O88895 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.03□□□□□ -2.25
Hdac3O88895 Gm22785-201ENSMUST00000104087 132 ntBASIC1.02□□□□□ -2.25
Hdac3O88895 Gm25323-201ENSMUST00000122555 103 ntBASIC1.02□□□□□ -2.25
Hdac3O88895 Gm26403-201ENSMUST00000158500 105 ntBASIC1.02□□□□□ -2.25
Hdac3O88895 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.02□□□□□ -2.25
Hdac3O88895 Gm24020-201ENSMUST00000180156 108 ntBASIC1.02□□□□□ -2.25
Hdac3O88895 Mir7014-201ENSMUST00000183853 63 ntBASIC1.02□□□□□ -2.25
Hdac3O88895 Gm43602-201ENSMUST00000196772 300 ntBASIC1.02□□□□□ -2.25
Hdac3O88895 Gm22743-201ENSMUST00000083445 133 ntBASIC1.02□□□□□ -2.25
Hdac3O88895 Mir211-201ENSMUST00000083651 106 ntBASIC1.02□□□□□ -2.25
Hdac3O88895 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.02□□□□□ -2.25
Hdac3O88895 Gm22148-201ENSMUST00000104445 107 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Gm22477-201ENSMUST00000122569 316 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Gm24559-201ENSMUST00000157519 121 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Gm26415-201ENSMUST00000157673 292 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Gm23083-201ENSMUST00000157851 116 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Gm22606-201ENSMUST00000158290 103 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Gm25069-201ENSMUST00000175238 86 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Mir3098-201ENSMUST00000175416 87 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Gm25750-201ENSMUST00000175483 112 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Gm24106-201ENSMUST00000175498 127 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Gm23419-201ENSMUST00000175523 84 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Gm24494-201ENSMUST00000083804 81 ntBASIC1.01□□□□□ -2.25
Hdac3O88895 Mir544-201ENSMUST00000103813 78 ntBASIC1□□□□□ -2.25
Hdac3O88895 Gm23772-201ENSMUST00000104433 102 ntBASIC1□□□□□ -2.25
Hdac3O88895 Gm23336-201ENSMUST00000117023 123 ntBASIC1□□□□□ -2.25
Hdac3O88895 Gm11856-201ENSMUST00000118712 276 ntBASIC1□□□□□ -2.25
Hdac3O88895 Gm13246-201ENSMUST00000120994 315 ntBASIC1□□□□□ -2.25
Hdac3O88895 Gm24345-201ENSMUST00000158706 124 ntBASIC1□□□□□ -2.25
Hdac3O88895 Gm20391-201ENSMUST00000174722 106 ntBASIC1□□□□□ -2.25
Hdac3O88895 Gm27928-201ENSMUST00000183747 256 ntBASIC1□□□□□ -2.25
Hdac3O88895 Mir7039-201ENSMUST00000183852 85 ntBASIC1□□□□□ -2.25
Hdac3O88895 Mir7063-201ENSMUST00000184158 91 ntBASIC1□□□□□ -2.25
Hdac3O88895 Gm28409-201ENSMUST00000187064 103 ntBASIC1□□□□□ -2.25
Hdac3O88895 Gm38274-201ENSMUST00000195689 148 ntBASIC1□□□□□ -2.25
Hdac3O88895 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1□□□□□ -2.25
Hdac3O88895 Mir3087-201ENSMUST00000199405 56 ntBASIC1□□□□□ -2.25
Hdac3O88895 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1□□□□□ -2.25
Hdac3O88895 Gm19790-201ENSMUST00000214414 251 ntBASIC1□□□□□ -2.25
Hdac3O88895 Snord1a-201ENSMUST00000083160 74 ntBASIC1□□□□□ -2.25
Hdac3O88895 Mir488-201ENSMUST00000093595 109 ntBASIC1□□□□□ -2.25
Hdac3O88895 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Hdac3O88895 Mir343-201ENSMUST00000102360 75 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 Gm11334-201ENSMUST00000121969 156 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.99□□□□□ -2.25
Hdac3O88895 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.99□□□□□ -2.25
Hdac3O88895 Gm22790-201ENSMUST00000157229 129 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 Gm22850-201ENSMUST00000157714 82 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 Gm22888-201ENSMUST00000158640 77 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 Gm17020-201ENSMUST00000172274 274 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 Gm26097-201ENSMUST00000179642 93 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 Gm26073-201ENSMUST00000179906 127 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 Gm43749-201ENSMUST00000199345 352 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 Gm45268-201ENSMUST00000210046 370 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.99□□□□□ -2.25
Hdac3O88895 Gm22780-201ENSMUST00000104084 132 ntBASIC0.98□□□□□ -2.25
Hdac3O88895 Gm25377-201ENSMUST00000104334 129 ntBASIC0.98□□□□□ -2.25
Hdac3O88895 Mir1298-201ENSMUST00000116681 98 ntBASIC0.98□□□□□ -2.25
Hdac3O88895 Gm15069-201ENSMUST00000117792 192 ntBASIC0.98□□□□□ -2.25
Hdac3O88895 Gm15068-201ENSMUST00000119796 192 ntBASIC0.98□□□□□ -2.25
Hdac3O88895 Gm14671-201ENSMUST00000121790 262 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 148.9 ms