Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.6□□□□□ -2.15
Best1O88870 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.6□□□□□ -2.15
Best1O88870 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Best1O88870 Gm23907-201ENSMUST00000104595 189 ntBASIC1.59□□□□□ -2.15
Best1O88870 Gm11792-201ENSMUST00000120640 168 ntBASIC1.59□□□□□ -2.15
Best1O88870 Gm22603-201ENSMUST00000157603 96 ntBASIC1.59□□□□□ -2.15
Best1O88870 Gm22557-201ENSMUST00000157804 102 ntBASIC1.59□□□□□ -2.15
Best1O88870 Gm26360-201ENSMUST00000158872 103 ntBASIC1.59□□□□□ -2.15
Best1O88870 Gm22914-201ENSMUST00000175195 77 ntBASIC1.59□□□□□ -2.15
Best1O88870 Gm23289-201ENSMUST00000175615 108 ntBASIC1.59□□□□□ -2.15
Best1O88870 Gm25128-201ENSMUST00000083339 76 ntBASIC1.59□□□□□ -2.15
Best1O88870 Gm22738-201ENSMUST00000083440 147 ntBASIC1.59□□□□□ -2.15
Best1O88870 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Best1O88870 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.58□□□□□ -2.16
Best1O88870 Gm25938-201ENSMUST00000104139 166 ntBASIC1.58□□□□□ -2.16
Best1O88870 Gm25377-201ENSMUST00000104334 129 ntBASIC1.58□□□□□ -2.16
Best1O88870 Gm22999-201ENSMUST00000157082 88 ntBASIC1.58□□□□□ -2.16
Best1O88870 Snord13-201ENSMUST00000157627 104 ntBASIC1.58□□□□□ -2.16
Best1O88870 Gm24880-201ENSMUST00000158776 85 ntBASIC1.58□□□□□ -2.16
Best1O88870 Gm18433-201ENSMUST00000192747 197 ntBASIC1.58□□□□□ -2.16
Best1O88870 Mir451a-201ENSMUST00000093557 72 ntBASIC1.58□□□□□ -2.16
Best1O88870 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.58□□□□□ -2.16
Best1O88870 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
Best1O88870 Mir466h-201ENSMUST00000104748 81 ntBASIC1.57□□□□□ -2.16
Best1O88870 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.57□□□□□ -2.16
Best1O88870 Gm27898-201ENSMUST00000183987 80 ntBASIC1.57□□□□□ -2.16
Best1O88870 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.57□□□□□ -2.16
Best1O88870 Gm25495-201ENSMUST00000104431 131 ntBASIC1.56□□□□□ -2.16
Best1O88870 Gm24808-201ENSMUST00000157993 118 ntBASIC1.56□□□□□ -2.16
Best1O88870 Gm27493-201ENSMUST00000184128 78 ntBASIC1.56□□□□□ -2.16
Best1O88870 Gm22148-201ENSMUST00000104445 107 ntBASIC1.55□□□□□ -2.16
Best1O88870 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Best1O88870 Gm23339-201ENSMUST00000158962 139 ntBASIC1.55□□□□□ -2.16
Best1O88870 Gm23864-201ENSMUST00000177607 107 ntBASIC1.55□□□□□ -2.16
Best1O88870 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.55□□□□□ -2.16
Best1O88870 Gm45471-201ENSMUST00000211270 281 ntBASIC1.55□□□□□ -2.16
Best1O88870 Gm23245-201ENSMUST00000083370 135 ntBASIC1.55□□□□□ -2.16
Best1O88870 Gm25832-201ENSMUST00000104140 130 ntBASIC1.54□□□□□ -2.16
Best1O88870 Gm14882-201ENSMUST00000117216 218 ntBASIC1.54□□□□□ -2.16
Best1O88870 Gm22862-201ENSMUST00000178593 121 ntBASIC1.54□□□□□ -2.16
Best1O88870 Gm22129-201ENSMUST00000179034 107 ntBASIC1.54□□□□□ -2.16
Best1O88870 Gm27365-201ENSMUST00000184041 177 ntBASIC1.54□□□□□ -2.16
Best1O88870 Mir7009-201ENSMUST00000184519 64 ntBASIC1.54□□□□□ -2.16
Best1O88870 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Best1O88870 Gm26224-201ENSMUST00000082506 80 ntBASIC1.54□□□□□ -2.16
Best1O88870 Gm24406-201ENSMUST00000083026 128 ntBASIC1.54□□□□□ -2.16
Best1O88870 Gm24457-201ENSMUST00000083196 105 ntBASIC1.54□□□□□ -2.16
Best1O88870 Mir320-201ENSMUST00000083594 82 ntBASIC1.54□□□□□ -2.16
Best1O88870 Gm25316-201ENSMUST00000116826 118 ntBASIC1.53□□□□□ -2.16
Best1O88870 Gm27711-201ENSMUST00000183802 118 ntBASIC1.53□□□□□ -2.16
Best1O88870 Gm44358-201ENSMUST00000196301 98 ntBASIC1.53□□□□□ -2.16
Best1O88870 Snord47-201ENSMUST00000083034 77 ntBASIC1.53□□□□□ -2.16
Best1O88870 Gm24271-201ENSMUST00000102327 111 ntBASIC1.52□□□□□ -2.17
Best1O88870 Gm16539-201ENSMUST00000160086 327 ntBASIC1.52□□□□□ -2.17
Best1O88870 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.52□□□□□ -2.17
Best1O88870 Gm44483-201ENSMUST00000197203 97 ntBASIC1.52□□□□□ -2.17
Best1O88870 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Best1O88870 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Best1O88870 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Best1O88870 Gm25011-201ENSMUST00000158398 126 ntBASIC1.51□□□□□ -2.17
Best1O88870 Gm25771-201ENSMUST00000158565 144 ntBASIC1.51□□□□□ -2.17
Best1O88870 Gm25241-201ENSMUST00000174909 84 ntBASIC1.51□□□□□ -2.17
Best1O88870 Gm26217-201ENSMUST00000175212 84 ntBASIC1.51□□□□□ -2.17
Best1O88870 Gm23567-201ENSMUST00000178005 107 ntBASIC1.51□□□□□ -2.17
Best1O88870 Gm27248-201ENSMUST00000184004 166 ntBASIC1.51□□□□□ -2.17
Best1O88870 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.51□□□□□ -2.17
Best1O88870 Mir489-201ENSMUST00000093599 107 ntBASIC1.51□□□□□ -2.17
Best1O88870 Gm25992-201ENSMUST00000102437 109 ntBASIC1.5□□□□□ -2.17
Best1O88870 Mir467g-201ENSMUST00000116906 120 ntBASIC1.5□□□□□ -2.17
Best1O88870 Gm22386-201ENSMUST00000158192 129 ntBASIC1.5□□□□□ -2.17
Best1O88870 Gm22944-201ENSMUST00000158662 133 ntBASIC1.5□□□□□ -2.17
Best1O88870 Gm24174-201ENSMUST00000158933 111 ntBASIC1.5□□□□□ -2.17
Best1O88870 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.5□□□□□ -2.17
Best1O88870 Gm26225-201ENSMUST00000082508 135 ntBASIC1.5□□□□□ -2.17
Best1O88870 Gm25769-201ENSMUST00000158569 127 ntBASIC1.49□□□□□ -2.17
Best1O88870 Gm28256-201ENSMUST00000188953 139 ntBASIC1.49□□□□□ -2.17
Best1O88870 Gm28559-201ENSMUST00000190532 139 ntBASIC1.49□□□□□ -2.17
Best1O88870 Gm43381-201ENSMUST00000198553 165 ntBASIC1.49□□□□□ -2.17
Best1O88870 Mir3087-201ENSMUST00000199405 56 ntBASIC1.49□□□□□ -2.17
Best1O88870 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.49□□□□□ -2.17
Best1O88870 Mir324-201ENSMUST00000083600 89 ntBASIC1.49□□□□□ -2.17
Best1O88870 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Best1O88870 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Best1O88870 Gm23772-201ENSMUST00000104433 102 ntBASIC1.48□□□□□ -2.17
Best1O88870 Gm11857-201ENSMUST00000119817 324 ntBASIC1.48□□□□□ -2.17
Best1O88870 Gm22482-201ENSMUST00000122563 359 ntBASIC1.48□□□□□ -2.17
Best1O88870 Gm22815-201ENSMUST00000157451 62 ntBASIC1.48□□□□□ -2.17
Best1O88870 Gm23080-201ENSMUST00000157846 103 ntBASIC1.48□□□□□ -2.17
Best1O88870 Gm23114-201ENSMUST00000158478 117 ntBASIC1.48□□□□□ -2.17
Best1O88870 Gm23375-201ENSMUST00000175407 83 ntBASIC1.48□□□□□ -2.17
Best1O88870 Gm5002-201ENSMUST00000207145 223 ntBASIC1.48□□□□□ -2.17
Best1O88870 Gm22973-201ENSMUST00000083298 191 ntBASIC1.48□□□□□ -2.17
Best1O88870 Gm25410-201ENSMUST00000083758 137 ntBASIC1.48□□□□□ -2.17
Best1O88870 Gm22612-201ENSMUST00000158293 101 ntBASIC1.47□□□□□ -2.17
Best1O88870 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.47□□□□□ -2.17
Best1O88870 Gm22233-201ENSMUST00000157464 114 ntBASIC1.46□□□□□ -2.18
Best1O88870 Gm24902-201ENSMUST00000158126 123 ntBASIC1.46□□□□□ -2.18
Best1O88870 Gm25868-201ENSMUST00000158253 114 ntBASIC1.46□□□□□ -2.18
Best1O88870 Gm22663-201ENSMUST00000158721 102 ntBASIC1.46□□□□□ -2.18
Best1O88870 Gm27934-201ENSMUST00000158795 63 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms