Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.56□□□□□ -2.5
Hmgb3O54879 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.56□□□□□ -2.5
Hmgb3O54879 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
Hmgb3O54879 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.57□□□□□ -2.5
Hmgb3O54879 Gm23536-201ENSMUST00000157541 134 ntBASIC-0.57□□□□□ -2.5
Hmgb3O54879 Gm22598-201ENSMUST00000157600 127 ntBASIC-0.57□□□□□ -2.5
Hmgb3O54879 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.57□□□□□ -2.5
Hmgb3O54879 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
Hmgb3O54879 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.57□□□□□ -2.5
Hmgb3O54879 AC153541.1-201ENSMUST00000213786 294 ntBASIC-0.57□□□□□ -2.5
Hmgb3O54879 Gm13059-201ENSMUST00000119881 398 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 Gm12785-201ENSMUST00000122052 172 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 Gm23627-201ENSMUST00000082459 107 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 Gm22502-201ENSMUST00000082488 107 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 Gm22977-201ENSMUST00000082615 107 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 Gm24149-201ENSMUST00000082757 107 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 Gm26107-201ENSMUST00000083972 107 ntBASIC-0.58□□□□□ -2.5
Hmgb3O54879 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.59□□□□□ -2.5
Hmgb3O54879 Gm25559-201ENSMUST00000157182 74 ntBASIC-0.59□□□□□ -2.5
Hmgb3O54879 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.59□□□□□ -2.5
Hmgb3O54879 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.59□□□□□ -2.5
Hmgb3O54879 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.59□□□□□ -2.5
Hmgb3O54879 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.59□□□□□ -2.5
Hmgb3O54879 AC132437.1-201ENSMUST00000218308 320 ntBASIC-0.59□□□□□ -2.5
Hmgb3O54879 AC116589.4-201ENSMUST00000222390 216 ntBASIC-0.59□□□□□ -2.5
Hmgb3O54879 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
Hmgb3O54879 Gm14039-201ENSMUST00000118705 101 ntBASIC-0.6□□□□□ -2.51
Hmgb3O54879 Gm26424-201ENSMUST00000122530 104 ntBASIC-0.6□□□□□ -2.51
Hmgb3O54879 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.6□□□□□ -2.51
Hmgb3O54879 Gm23097-201ENSMUST00000083448 105 ntBASIC-0.6□□□□□ -2.51
Hmgb3O54879 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
Hmgb3O54879 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.61□□□□□ -2.51
Hmgb3O54879 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.61□□□□□ -2.51
Hmgb3O54879 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.61□□□□□ -2.51
Hmgb3O54879 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.61□□□□□ -2.51
Hmgb3O54879 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.61□□□□□ -2.51
Hmgb3O54879 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.61□□□□□ -2.51
Hmgb3O54879 Gm9227-201ENSMUST00000194733 566 ntBASIC-0.61□□□□□ -2.51
Hmgb3O54879 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.61□□□□□ -2.51
Hmgb3O54879 AC132918.1-201ENSMUST00000227877 925 ntBASIC-0.61□□□□□ -2.51
Hmgb3O54879 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.61□□□□□ -2.51
Hmgb3O54879 Mir200b-201ENSMUST00000083615 70 ntBASIC-0.61□□□□□ -2.51
Hmgb3O54879 Mir496a-201ENSMUST00000093627 79 ntBASIC-0.61□□□□□ -2.51
Hmgb3O54879 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.62□□□□□ -2.51
Hmgb3O54879 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.62□□□□□ -2.51
Hmgb3O54879 Gm37338-201ENSMUST00000191986 127 ntBASIC-0.62□□□□□ -2.51
Hmgb3O54879 Gm38183-201ENSMUST00000193189 205 ntBASIC-0.62□□□□□ -2.51
Hmgb3O54879 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.62□□□□□ -2.51
Hmgb3O54879 AC166358.7-201ENSMUST00000221132 108 ntBASIC-0.62□□□□□ -2.51
Hmgb3O54879 AC125543.5-201ENSMUST00000222799 108 ntBASIC-0.62□□□□□ -2.51
Hmgb3O54879 AC154484.1-201ENSMUST00000227311 771 ntBASIC-0.62□□□□□ -2.51
Hmgb3O54879 Gm24037-201ENSMUST00000082871 180 ntBASIC-0.62□□□□□ -2.51
Hmgb3O54879 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.62□□□□□ -2.51
Hmgb3O54879 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.63□□□□□ -2.51
Hmgb3O54879 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.63□□□□□ -2.51
Hmgb3O54879 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.63□□□□□ -2.51
Hmgb3O54879 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.63□□□□□ -2.51
Hmgb3O54879 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.63□□□□□ -2.51
Hmgb3O54879 Gm23379-201ENSMUST00000180026 107 ntBASIC-0.63□□□□□ -2.51
Hmgb3O54879 AC116589.1-201ENSMUST00000220634 327 ntBASIC-0.63□□□□□ -2.51
Hmgb3O54879 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.64□□□□□ -2.51
Hmgb3O54879 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.64□□□□□ -2.51
Hmgb3O54879 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.64□□□□□ -2.51
Hmgb3O54879 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.64□□□□□ -2.51
Hmgb3O54879 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.64□□□□□ -2.51
Hmgb3O54879 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.64□□□□□ -2.51
Hmgb3O54879 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.64□□□□□ -2.51
Hmgb3O54879 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.64□□□□□ -2.51
Hmgb3O54879 AC145736.2-201ENSMUST00000216305 365 ntBASIC-0.64□□□□□ -2.51
Hmgb3O54879 Gm26495-201ENSMUST00000083152 137 ntBASIC-0.64□□□□□ -2.51
Hmgb3O54879 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-0.65□□□□□ -2.51
Hmgb3O54879 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
Hmgb3O54879 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.65□□□□□ -2.51
Hmgb3O54879 Gm14293-201ENSMUST00000118528 577 ntBASIC-0.65□□□□□ -2.51
Hmgb3O54879 Gm11407-201ENSMUST00000120362 1058 ntBASIC-0.65□□□□□ -2.51
Hmgb3O54879 Gm14574-201ENSMUST00000120644 279 ntBASIC-0.65□□□□□ -2.51
Hmgb3O54879 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.65□□□□□ -2.51
Hmgb3O54879 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.65□□□□□ -2.51
Hmgb3O54879 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-0.65□□□□□ -2.51
Hmgb3O54879 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.65□□□□□ -2.51
Hmgb3O54879 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.65□□□□□ -2.51
Hmgb3O54879 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.65□□□□□ -2.51
Hmgb3O54879 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.65□□□□□ -2.51
Hmgb3O54879 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 Gm13801-201ENSMUST00000120750 160 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 Gm23571-201ENSMUST00000180073 127 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 AC164297.5-201ENSMUST00000224365 198 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms